Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is lrp [C]

Identifier: 87198850

GI number: 87198850

Start: 880677

End: 880988

Strand: Direct

Name: lrp [C]

Synonym: Saro_0828

Alternate gene names: 87198850

Gene position: 880677-880988 (Clockwise)

Preceding gene: 87198849

Following gene: 87198853

Centisome position: 24.73

GC content: 62.82

Gene sequence:

>312_bases
ATGCATAGCGCAGCGGCGGATTCTTGTGCCGGCACGGAAATGCTCCTGCAGGTCACGGTCGATCGGCGTCGCCATGGCCG
CAACGTTGTTTTCGACGAGGCTGTCCGGGACTGTCCGGAAGTGCTCGAATGCCTGCTGCTGTCAGGTGACATGGGATATT
GGTTGCGCGTGCGCGTGGCCTCGCTTGCCGACTACGAGGACCTGCGCGAGCGGCTGCTCACGCTTCTGCCGGGCGTGCAG
CGGATAACGGCATCCGTCGTCTTGCAGAGCATTGTCGGCAACGGAGCCGCCGCTCTTCTTTCAAGTGGCTGA

Upstream 100 bases:

>100_bases
CTGATCGGCCTGCGCGCAGGGCAGTCCATCGACTGGCCCAACGTGCGCGGAAAGCAGCGCGCAATCACCATCGAGCAGGT
CATCAAGCCAGGGGGCTGCC

Downstream 100 bases:

>100_bases
AGCGACGTGAAAAAAACGGGGCGGCGCGCGATGCGCTCCGCCCCGAGTCGCGTCTCATGCGTCTGGTTCGCCTGAGAACG
TCAGAACTTTACGGTGATCA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: Leucine-Responsive Regulatory Protein; Transcriptional Regulator AsnC Family

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MHSAAADSCAGTEMLLQVTVDRRRHGRNVVFDEAVRDCPEVLECLLLSGDMGYWLRVRVASLADYEDLRERLLTLLPGVQ
RITASVVLQSIVGNGAAALLSSG

Sequences:

>Translated_103_residues
MHSAAADSCAGTEMLLQVTVDRRRHGRNVVFDEAVRDCPEVLECLLLSGDMGYWLRVRVASLADYEDLRERLLTLLPGVQ
RITASVVLQSIVGNGAAALLSSG
>Mature_103_residues
MHSAAADSCAGTEMLLQVTVDRRRHGRNVVFDEAVRDCPEVLECLLLSGDMGYWLRVRVASLADYEDLRERLLTLLPGVQ
RITASVVLQSIVGNGAAALLSSG

Specific function: Mediates A Global Response To Leucine. Exogenous Leucine Affects The Expression Of A Number Of Different Operons; Lrp Mediates This Effect For At Least Some Of These Operons. For Example It Is Regulator Of The Branched-Chain Amino Acid Transport Genes. [

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11170; Mature: 11170

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSAAADSCAGTEMLLQVTVDRRRHGRNVVFDEAVRDCPEVLECLLLSGDMGYWLRVRVA
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
SLADYEDLRERLLTLLPGVQRITASVVLQSIVGNGAAALLSSG
HHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure
MHSAAADSCAGTEMLLQVTVDRRRHGRNVVFDEAVRDCPEVLECLLLSGDMGYWLRVRVA
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
SLADYEDLRERLLTLLPGVQRITASVVLQSIVGNGAAALLSSG
HHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA