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The map label for this gene is rfbU [H]

Identifier: 87198776

GI number: 87198776

Start: 797758

End: 799029

Strand: Direct

Name: rfbU [H]

Synonym: Saro_0752

Alternate gene names: 87198776

Gene position: 797758-799029 (Clockwise)

Preceding gene: 87198775

Following gene: 87198777

Centisome position: 22.4

GC content: 62.42

Gene sequence:

>1272_bases
ATGAGGGTCGCCATCGACGCATTCAACATCGCGCTTGCGCACGGGACCGGGGTTGCAACCTATGGGCGCACCCTGGCGTC
CGCTGCCGCCGGACTGGGGCATGAGGTGAACGTCCTGTTCGGTGCCGGTGCCGGGTACTCGAAGGTTCCGCTCCTCAACG
AGATTGCGCTTGCCGAAGTTGGTGCGGTTTCAGCACGGGGCCCTTCACGCGCGGCATTGGCTCGCGGGATCGCGCGCGGT
CTTGCCGGTGCGCGTCCGGCGCACGACTTGCCAATTTCTGGGCAGGTCATTCTGCCTCCAGGCCTCAGGCTGGATGCCAG
GCGTCACTCGAACGTACCGAACCTCTTCAAGGCCGCAGATCTCGGGTTTCGTGCGGCAGGCGCTTTCTCCAAGGTGAAGG
TGCCCGGCACCGATCTGGCGCACTGGACGTATCCGCTGCCGCTGAAAATGGTCGGTGCCCGCAACGTGTATACGCTGCAC
GACCTTGTCCCGCTGCGTCTGCCCTACACCACAGCGGATGTGAAACACGCCTATTACCGCTTGTGCCGACGGATCGCGCG
CGACGCGGATCATATCCTTACCGTGTCGGAATGCTCGCGCCGCGACATCGTCCGGTTGCTGGGCGTCGATGAAGATCGCG
TTACCAACCTCTACCAGACGAGCGATATCGCCGATGCCATCGCTGGTGTGAGCGAAGACTTCGTTGCTCGCTACGTCGAG
GGTCTGCTTGGTGTCGGCATGCGCGAATACTTCCTCTTCTTCGGCGCAATCGAACCAAAGAAGAACGTGGCACGCCTGAT
CGAGGCATTTTTGGCAAGCGCAGTGCAATCCCCGCTGGTGATCGTTGGCGGGGCGGGATGGGGCGGCGAACAGGACGTGA
AGCTGCTCAAATCCTTGGCCGGGATGGACACGCGCAAGCGCATCGTCTGGCTGGGGTATCTCCCGCGTCAGATGCTGGCC
ATGTTGATCGCAGGCGCAAGAGCCACGGTGTTCCCGTCGCTCTACGAAGGCTTCGGGCTGCCCGTTCTTGAATCGATGGA
ACTGGGCACACCTGTCATCACGAGCAATGTCTCGTCCCTGCCCGAAGTTGCCCAGGATGCGGGATTGCTTGTCGATCCGT
ACGATGTTCGCTCGCTCGCGACGGCTTTCCTGCAACTGGATGCCGACCCGGGCCTGCGCAGTCAAATGTCCATGCGTGGG
CGCGAAGTGGCTGCCGGCTTCAGTGCCGAAGCCTATCGGGGGCGGCTCGCGGACTTCTATGCCAAGTTCTGA

Upstream 100 bases:

>100_bases
GGTGACGAACGTGGTGTTCCTGCCCAATGGCTGAAGCCTCTATCGCCAACAGCCACAACTCTCGCCCCCCGGCTTTCCTG
CGGTGCAGGCGGCACGGTCG

Downstream 100 bases:

>100_bases
TGGTGAAATGACGATGACCATGTGCTCCGGCCTCTCCCGCTGGTCCGTTCTTTTGGCCGCTGGCTCCACCTTGCTAGCGG
CACTGTCCGGATGCAGCTCG

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MRVAIDAFNIALAHGTGVATYGRTLASAAAGLGHEVNVLFGAGAGYSKVPLLNEIALAEVGAVSARGPSRAALARGIARG
LAGARPAHDLPISGQVILPPGLRLDARRHSNVPNLFKAADLGFRAAGAFSKVKVPGTDLAHWTYPLPLKMVGARNVYTLH
DLVPLRLPYTTADVKHAYYRLCRRIARDADHILTVSECSRRDIVRLLGVDEDRVTNLYQTSDIADAIAGVSEDFVARYVE
GLLGVGMREYFLFFGAIEPKKNVARLIEAFLASAVQSPLVIVGGAGWGGEQDVKLLKSLAGMDTRKRIVWLGYLPRQMLA
MLIAGARATVFPSLYEGFGLPVLESMELGTPVITSNVSSLPEVAQDAGLLVDPYDVRSLATAFLQLDADPGLRSQMSMRG
REVAAGFSAEAYRGRLADFYAKF

Sequences:

>Translated_423_residues
MRVAIDAFNIALAHGTGVATYGRTLASAAAGLGHEVNVLFGAGAGYSKVPLLNEIALAEVGAVSARGPSRAALARGIARG
LAGARPAHDLPISGQVILPPGLRLDARRHSNVPNLFKAADLGFRAAGAFSKVKVPGTDLAHWTYPLPLKMVGARNVYTLH
DLVPLRLPYTTADVKHAYYRLCRRIARDADHILTVSECSRRDIVRLLGVDEDRVTNLYQTSDIADAIAGVSEDFVARYVE
GLLGVGMREYFLFFGAIEPKKNVARLIEAFLASAVQSPLVIVGGAGWGGEQDVKLLKSLAGMDTRKRIVWLGYLPRQMLA
MLIAGARATVFPSLYEGFGLPVLESMELGTPVITSNVSSLPEVAQDAGLLVDPYDVRSLATAFLQLDADPGLRSQMSMRG
REVAAGFSAEAYRGRLADFYAKF
>Mature_423_residues
MRVAIDAFNIALAHGTGVATYGRTLASAAAGLGHEVNVLFGAGAGYSKVPLLNEIALAEVGAVSARGPSRAALARGIARG
LAGARPAHDLPISGQVILPPGLRLDARRHSNVPNLFKAADLGFRAAGAFSKVKVPGTDLAHWTYPLPLKMVGARNVYTLH
DLVPLRLPYTTADVKHAYYRLCRRIARDADHILTVSECSRRDIVRLLGVDEDRVTNLYQTSDIADAIAGVSEDFVARYVE
GLLGVGMREYFLFFGAIEPKKNVARLIEAFLASAVQSPLVIVGGAGWGGEQDVKLLKSLAGMDTRKRIVWLGYLPRQMLA
MLIAGARATVFPSLYEGFGLPVLESMELGTPVITSNVSSLPEVAQDAGLLVDPYDVRSLATAFLQLDADPGLRSQMSMRG
REVAAGFSAEAYRGRLADFYAKF

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 45346; Mature: 45346

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVAIDAFNIALAHGTGVATYGRTLASAAAGLGHEVNVLFGAGAGYSKVPLLNEIALAEV
CEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
GAVSARGPSRAALARGIARGLAGARPAHDLPISGQVILPPGLRLDARRHSNVPNLFKAAD
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEECCHHCCCCCHHHHHHC
LGFRAAGAFSKVKVPGTDLAHWTYPLPLKMVGARNVYTLHDLVPLRLPYTTADVKHAYYR
CCCHHCCCCCEEECCCCCCCCEECCCCEEEECCCCEEEHHHCEEEECCCCHHHHHHHHHH
LCRRIARDADHILTVSECSRRDIVRLLGVDEDRVTNLYQTSDIADAIAGVSEDFVARYVE
HHHHHHCCHHHEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
GLLGVGMREYFLFFGAIEPKKNVARLIEAFLASAVQSPLVIVGGAGWGGEQDVKLLKSLA
HHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH
GMDTRKRIVWLGYLPRQMLAMLIAGARATVFPSLYEGFGLPVLESMELGTPVITSNVSSL
CCCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHCCCCCHHHCCHHHH
PEVAQDAGLLVDPYDVRSLATAFLQLDADPGLRSQMSMRGREVAAGFSAEAYRGRLADFY
HHHHHHCCCEECCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHCCCCHHHHHHHHHHHH
AKF
HCC
>Mature Secondary Structure
MRVAIDAFNIALAHGTGVATYGRTLASAAAGLGHEVNVLFGAGAGYSKVPLLNEIALAEV
CEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
GAVSARGPSRAALARGIARGLAGARPAHDLPISGQVILPPGLRLDARRHSNVPNLFKAAD
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEECCHHCCCCCHHHHHHC
LGFRAAGAFSKVKVPGTDLAHWTYPLPLKMVGARNVYTLHDLVPLRLPYTTADVKHAYYR
CCCHHCCCCCEEECCCCCCCCEECCCCEEEECCCCEEEHHHCEEEECCCCHHHHHHHHHH
LCRRIARDADHILTVSECSRRDIVRLLGVDEDRVTNLYQTSDIADAIAGVSEDFVARYVE
HHHHHHCCHHHEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
GLLGVGMREYFLFFGAIEPKKNVARLIEAFLASAVQSPLVIVGGAGWGGEQDVKLLKSLA
HHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH
GMDTRKRIVWLGYLPRQMLAMLIAGARATVFPSLYEGFGLPVLESMELGTPVITSNVSSL
CCCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHCCCCCHHHCCHHHH
PEVAQDAGLLVDPYDVRSLATAFLQLDADPGLRSQMSMRGREVAAGFSAEAYRGRLADFY
HHHHHHCCCEECCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHCCCCHHHHHHHHHHHH
AKF
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]