Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198775
Identifier: 87198775
GI number: 87198775
Start: 796771
End: 797691
Strand: Direct
Name: 87198775
Synonym: Saro_0751
Alternate gene names: NA
Gene position: 796771-797691 (Clockwise)
Preceding gene: 87198774
Following gene: 87198776
Centisome position: 22.37
GC content: 56.46
Gene sequence:
>921_bases ATGCTCAGTCGAGACTGCGTAGAGTGGGGTTATCGACTGATACTTGGTCGTGACCCGGAGTCCGAGGGCGTCATTTCGGA AAAGATGACGTGCGAAGACTATCGTGATTTGTCAGGTCAGCTCATCTATTCGGACGAGTTCATCTCGAAGCAGCCAAGTT TCATGCCCCCACTCAACAAGTGGGTCATGGCTGAGAGCGAACTGGGCTTCAAGATCTGGGTCAACCTCGCCGACACCGCG ATATCCTGGGAAATTCTCAGAAACCGGTTCGAGAGCGCAGAAGTTGCCTTCGTGAAATCCCACATCCGCGAGGGGGATGT CATCATCGACATCGGAGCCAACATCGGCTTCTTTTCGATGCTGTTTTCCAAGCTCGTTGGCCCGACCGGCCGCGTCATCG GATTTGAACCGATGCCCTTCCTGTTCGAGCGCGCTGCCATGTCCGCGCGCGAGAACAACTTTGACCGGTGTGAAATCCAC AACGTTGCCCTCGCCAGCGAAGCGGGCATCGCTCATCTCGTCTACGCCCCCGGTTCACCGAACTGGGGCGGGTCGTTCCT CTCTTTCGGCGGTTCCATTCTCCCTGACCACGCGGCAGTTCCCGTGTCGGTCCAGCCGCTGGCGAAATATGTCGGCGATC TGGACGTCAAACTGGTGAAGATCGATGTCGAGGGAGGGGAGTTTTTCGTAATTTCGAGCGCTCTGGATTTCTTCAGGCGT GCCAGGCCGATCATTCTGTCGGAAATCCATTCAGACCAGCTTCGTCGTGTAAGCGGCGTATCTGCGAAGCAATACGTCAC GCTGATCGCGAGTGCCGGTTACGATTGCTTCGAGTTGAAGGACGAGGGAGGCCTGGGGAAGCAGTTGACAGGCGACGAAG AGATAACGGTGACGAACGTGGTGTTCCTGCCCAATGGCTGA
Upstream 100 bases:
>100_bases TGCGCAGCTTCTGCATAGTGAAAGGCAGCGACACCGTGCAGCGGCTGAGAATTGCCGAAAGGCAGGGCTACCGGTCGACA GTTGGCATGGGAGAGGCTTA
Downstream 100 bases:
>100_bases AGCCTCTATCGCCAACAGCCACAACTCTCGCCCCCCGGCTTTCCTGCGGTGCAGGCGGCACGGTCGATGAGGGTCGCCAT CGACGCATTCAACATCGCGC
Product: methyltransferase FkbM
Products: NA
Alternate protein names: FkbM Family Methyltransferase; Methyltransferase FkbM; Methyltransferase; Ata11 Protein; Lipopolysaccharide Biosynthesis Protein
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MLSRDCVEWGYRLILGRDPESEGVISEKMTCEDYRDLSGQLIYSDEFISKQPSFMPPLNKWVMAESELGFKIWVNLADTA ISWEILRNRFESAEVAFVKSHIREGDVIIDIGANIGFFSMLFSKLVGPTGRVIGFEPMPFLFERAAMSARENNFDRCEIH NVALASEAGIAHLVYAPGSPNWGGSFLSFGGSILPDHAAVPVSVQPLAKYVGDLDVKLVKIDVEGGEFFVISSALDFFRR ARPIILSEIHSDQLRRVSGVSAKQYVTLIASAGYDCFELKDEGGLGKQLTGDEEITVTNVVFLPNG
Sequences:
>Translated_306_residues MLSRDCVEWGYRLILGRDPESEGVISEKMTCEDYRDLSGQLIYSDEFISKQPSFMPPLNKWVMAESELGFKIWVNLADTA ISWEILRNRFESAEVAFVKSHIREGDVIIDIGANIGFFSMLFSKLVGPTGRVIGFEPMPFLFERAAMSARENNFDRCEIH NVALASEAGIAHLVYAPGSPNWGGSFLSFGGSILPDHAAVPVSVQPLAKYVGDLDVKLVKIDVEGGEFFVISSALDFFRR ARPIILSEIHSDQLRRVSGVSAKQYVTLIASAGYDCFELKDEGGLGKQLTGDEEITVTNVVFLPNG >Mature_306_residues MLSRDCVEWGYRLILGRDPESEGVISEKMTCEDYRDLSGQLIYSDEFISKQPSFMPPLNKWVMAESELGFKIWVNLADTA ISWEILRNRFESAEVAFVKSHIREGDVIIDIGANIGFFSMLFSKLVGPTGRVIGFEPMPFLFERAAMSARENNFDRCEIH NVALASEAGIAHLVYAPGSPNWGGSFLSFGGSILPDHAAVPVSVQPLAKYVGDLDVKLVKIDVEGGEFFVISSALDFFRR ARPIILSEIHSDQLRRVSGVSAKQYVTLIASAGYDCFELKDEGGLGKQLTGDEEITVTNVVFLPNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33828; Mature: 33828
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRDCVEWGYRLILGRDPESEGVISEKMTCEDYRDLSGQLIYSDEFISKQPSFMPPLNK CCCHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCEEEEECHHHCCCCCCCCCCHH WVMAESELGFKIWVNLADTAISWEILRNRFESAEVAFVKSHIREGDVIIDIGANIGFFSM HEEECCCCCEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCHHHHH LFSKLVGPTGRVIGFEPMPFLFERAAMSARENNFDRCEIHNVALASEAGIAHLVYAPGSP HHHHHCCCCCCEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEECCCCC NWGGSFLSFGGSILPDHAAVPVSVQPLAKYVGDLDVKLVKIDVEGGEFFVISSALDFFRR CCCCHHHHCCCCCCCCCCCCCEEHHHHHHHHCCCCEEEEEEEECCCCEEEEHHHHHHHHH ARPIILSEIHSDQLRRVSGVSAKQYVTLIASAGYDCFELKDEGGLGKQLTGDEEITVTNV CCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEE VFLPNG EEECCC >Mature Secondary Structure MLSRDCVEWGYRLILGRDPESEGVISEKMTCEDYRDLSGQLIYSDEFISKQPSFMPPLNK CCCHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCEEEEECHHHCCCCCCCCCCHH WVMAESELGFKIWVNLADTAISWEILRNRFESAEVAFVKSHIREGDVIIDIGANIGFFSM HEEECCCCCEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCHHHHH LFSKLVGPTGRVIGFEPMPFLFERAAMSARENNFDRCEIHNVALASEAGIAHLVYAPGSP HHHHHCCCCCCEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEECCCCC NWGGSFLSFGGSILPDHAAVPVSVQPLAKYVGDLDVKLVKIDVEGGEFFVISSALDFFRR CCCCHHHHCCCCCCCCCCCCCEEHHHHHHHHCCCCEEEEEEEECCCCEEEEHHHHHHHHH ARPIILSEIHSDQLRRVSGVSAKQYVTLIASAGYDCFELKDEGGLGKQLTGDEEITVTNV CCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEE VFLPNG EEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA