Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198774
Identifier: 87198774
GI number: 87198774
Start: 794450
End: 796771
Strand: Direct
Name: 87198774
Synonym: Saro_0750
Alternate gene names: NA
Gene position: 794450-796771 (Clockwise)
Preceding gene: 87198773
Following gene: 87198775
Centisome position: 22.31
GC content: 60.9
Gene sequence:
>2322_bases ATGCCGATGGTTCTGCCCGACATCCTGAACCCGGACTACCAACGAGCGCGAGGGGACGCAGCCCGCGATGCCGGCGACTG GTTGGCCGCAGCGAAGTGTTACTCCCGCTACCTGCGCTTTCGGCGGCGGGATGCCGGGATATGGGTTCAGCTTGGCAATG TGCTCAAGGAATGTGGCCGTTTTCAGCAAAGCGAACGGGCATACCTCCGGGCGATGCGGCTGGGGCTCAATGATTCCGAT CTGCATTTGCAGTTGGGGCACCTGTCCAAGGTGCGCGGCCAGGCGGGTTCTGCCCGGCACCACTACCTGACAGCCATTCG CCGCCAACCGATGAGCGTCGATGCCTTCGAGGAACTTGTGAAGATGGGACTTGAGGCTGAAGCCAACACGATCCTCCTGA CCGAGCGGAAGACCGGGGAGGAGCCGGGGGAGATGCTGATCTTCGATGTGTCAGACCTGATCTATTACGTCGGGCATCAC GACAACCTTTCCGGCATACAGCGGGTCCAGTGCTGCATAATCCAGGCGATCGTGAAGTATGGGTTGAAACCGCTCGATCA AATCGGTTTCATTTCATTCAACAGGCGATCGAACGGGTTCATGATGCTCGACCGTACGAGGTTCCTCGCCTGGCTTGACG ATTTGTCGTTGCCGCCGGAGCAGCGCTGCGTTCCGTTCGATGTCGCCGAGGCGCGGGAGGGTCGAATTTTTCCGATGGGG CCGCTGGCTGCGTTCATCCAGCCTGAGCGCACCACCCTGGTCCTGCTGGGCGCCGCATGGGTGACACCCGATTACCCCAC CAAGATCGCCAATTTAAAGCGCTTGTTTTCAGCGCGCTTTGTCATGGTGTTCCATGACTTCATACCGATCTTCGCAAAGG AGACTTGCGACCAGGGGACGGTCGAAGTCTTCAAGGAGTTCATCGATCAGATACTGCCGATCACGGACGTGGCGCTGTGT GTTTCGCGGAACACACGGGATGACCTGCACCGCTATTGCGCCAACGCTGGAATATGCGCGCCGCCGGCATTGGTGACGCG CCTCGGGTCCGGATTTCATGAATTCTTCCCCGAAGTTTCCGACCGGTCTGCACTGCCCGTGCCGGCAGGCCGCAGGGGAA CGCCCTACGTCCTGTTCGTCTCGACCATCGAAGGGCGCAAGAACCACCAATACCTGTTCGATGTCTGGGACGAACTCGCC AGGCGAGGCGTCGACACGCCCCGGATACTGTGTGTCGGCAGGCTCGGCTGGCGGGCTGAACCCGCCATCATCAAGCTCAT TGAGACGGACTATCTGGGCGGAAAGGTCGAAATCCGGGAGGACGTCAGCGATATCGAGCTCAAGGCCCTCTACGAAGGTG CGCTGTTCACCGTCTACCCAAGCATTTATGAGGGTTGGGGGCTCCCCGTCAGCGAAAGTCTCGCGAACGGCAAGGTCTGC GTTCTGGCGGATCGCACCTCTCTTCCGGAAGTCGCGGGAGAATTCGGGGTCTATGTTCCCCTTGATGATCCTGCCGCCGC GGCAGACGTTGTTGCGGAGCTTTTGTCCCGCCCTGGCGAACTTGCGCGGCGCGAGGAGGCAATCCGCGAGAAATTCCAGC ATACGAGCTGGCGCATCGTGGCCGAGGTGGCCTTGCAGGGCTGCACGCTGGCGCGAACCAATCCCGTCCGGTCGGCGTTG CCCACCGTCAGGGCCGCGGTCGAATACCCGGTTCGCAGTTTGCGGATGTCGACGCAGGGGTTGATGGGTAGCGCAATGAT GGATGCGCTTGAGCAGGCGCATGCCGCATTGATTTTACCCGGTAGCGTCAAGTCGGCGCACAAGGTCTCCGGGCTGCTGT GTCGCAACTCGGACTGGTACGCGCCTGAAGATTGGGGAAGCTGGGCAAGGGCGCGAAAGGCTCGCGTCCAGTTCGCGGTC GAAGCGTCCGAATTCGATGGCGAGGATGAAGTCCTCATCTACCTGGCGCTGCGCTTCCTTGAGCCGGCATTGCCTGCGAC CGTGCGTATCACCTTGAGTGGTTGCGGTCGATCGCACCGCCAACAGGTGCGTACGGAAGAGGCCATGATGGTCTGGCCGG TCCATGCTCGGGATTTTGGCAGTGCCATCGCCTCAGACAGCGACAGGCTCGCCTTGGAATTGCAGCTCGAAATCGTCGGG ATGGACGCTTCTGTCGAGGCCGCGTGCCGCACCATGGATTCGCGGGAACTGGTGTTCGGGCTGCGCAGCTTCTGCATAGT GAAAGGCAGCGACACCGTGCAGCGGCTGAGAATTGCCGAAAGGCAGGGCTACCGGTCGACAGTTGGCATGGGAGAGGCTT AA
Upstream 100 bases:
>100_bases AGCACCTGAAGCTCCAGATCGCCCAATGGGTGACCACGTCGTTCGGGATGATCGTCAGGAAAAGGGGCCGGAATCCGCTG GCTTCGAAGTTCGGAGCCTG
Downstream 100 bases:
>100_bases TGCTCAGTCGAGACTGCGTAGAGTGGGGTTATCGACTGATACTTGGTCGTGACCCGGAGTCCGAGGGCGTCATTTCGGAA AAGATGACGTGCGAAGACTA
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Group 1 Protein; Mannosyltransferase; Glycosyl Transferase; Glycosyltransferase WbpX; Mannosyltransferase A; Mannosyltransferase B; Lipopolysaccharide N-Acetylglucosaminyltransferase II; Lipopolysaccharide N-Acetylglucosaminyltransferase I; Mannosyl Transferase B; Glycosyl Transferase Protein; Glycosyl Transferase WbpY; Glycosyl Transferase Group 1 Family; Bifunctional Glycosyltransferase; Glycosyl Transferase Family Protein; Glycosyltransferase Group 1 Family Protein
Number of amino acids: Translated: 773; Mature: 772
Protein sequence:
>773_residues MPMVLPDILNPDYQRARGDAARDAGDWLAAAKCYSRYLRFRRRDAGIWVQLGNVLKECGRFQQSERAYLRAMRLGLNDSD LHLQLGHLSKVRGQAGSARHHYLTAIRRQPMSVDAFEELVKMGLEAEANTILLTERKTGEEPGEMLIFDVSDLIYYVGHH DNLSGIQRVQCCIIQAIVKYGLKPLDQIGFISFNRRSNGFMMLDRTRFLAWLDDLSLPPEQRCVPFDVAEAREGRIFPMG PLAAFIQPERTTLVLLGAAWVTPDYPTKIANLKRLFSARFVMVFHDFIPIFAKETCDQGTVEVFKEFIDQILPITDVALC VSRNTRDDLHRYCANAGICAPPALVTRLGSGFHEFFPEVSDRSALPVPAGRRGTPYVLFVSTIEGRKNHQYLFDVWDELA RRGVDTPRILCVGRLGWRAEPAIIKLIETDYLGGKVEIREDVSDIELKALYEGALFTVYPSIYEGWGLPVSESLANGKVC VLADRTSLPEVAGEFGVYVPLDDPAAAADVVAELLSRPGELARREEAIREKFQHTSWRIVAEVALQGCTLARTNPVRSAL PTVRAAVEYPVRSLRMSTQGLMGSAMMDALEQAHAALILPGSVKSAHKVSGLLCRNSDWYAPEDWGSWARARKARVQFAV EASEFDGEDEVLIYLALRFLEPALPATVRITLSGCGRSHRQQVRTEEAMMVWPVHARDFGSAIASDSDRLALELQLEIVG MDASVEAACRTMDSRELVFGLRSFCIVKGSDTVQRLRIAERQGYRSTVGMGEA
Sequences:
>Translated_773_residues MPMVLPDILNPDYQRARGDAARDAGDWLAAAKCYSRYLRFRRRDAGIWVQLGNVLKECGRFQQSERAYLRAMRLGLNDSD LHLQLGHLSKVRGQAGSARHHYLTAIRRQPMSVDAFEELVKMGLEAEANTILLTERKTGEEPGEMLIFDVSDLIYYVGHH DNLSGIQRVQCCIIQAIVKYGLKPLDQIGFISFNRRSNGFMMLDRTRFLAWLDDLSLPPEQRCVPFDVAEAREGRIFPMG PLAAFIQPERTTLVLLGAAWVTPDYPTKIANLKRLFSARFVMVFHDFIPIFAKETCDQGTVEVFKEFIDQILPITDVALC VSRNTRDDLHRYCANAGICAPPALVTRLGSGFHEFFPEVSDRSALPVPAGRRGTPYVLFVSTIEGRKNHQYLFDVWDELA RRGVDTPRILCVGRLGWRAEPAIIKLIETDYLGGKVEIREDVSDIELKALYEGALFTVYPSIYEGWGLPVSESLANGKVC VLADRTSLPEVAGEFGVYVPLDDPAAAADVVAELLSRPGELARREEAIREKFQHTSWRIVAEVALQGCTLARTNPVRSAL PTVRAAVEYPVRSLRMSTQGLMGSAMMDALEQAHAALILPGSVKSAHKVSGLLCRNSDWYAPEDWGSWARARKARVQFAV EASEFDGEDEVLIYLALRFLEPALPATVRITLSGCGRSHRQQVRTEEAMMVWPVHARDFGSAIASDSDRLALELQLEIVG MDASVEAACRTMDSRELVFGLRSFCIVKGSDTVQRLRIAERQGYRSTVGMGEA >Mature_772_residues PMVLPDILNPDYQRARGDAARDAGDWLAAAKCYSRYLRFRRRDAGIWVQLGNVLKECGRFQQSERAYLRAMRLGLNDSDL HLQLGHLSKVRGQAGSARHHYLTAIRRQPMSVDAFEELVKMGLEAEANTILLTERKTGEEPGEMLIFDVSDLIYYVGHHD NLSGIQRVQCCIIQAIVKYGLKPLDQIGFISFNRRSNGFMMLDRTRFLAWLDDLSLPPEQRCVPFDVAEAREGRIFPMGP LAAFIQPERTTLVLLGAAWVTPDYPTKIANLKRLFSARFVMVFHDFIPIFAKETCDQGTVEVFKEFIDQILPITDVALCV SRNTRDDLHRYCANAGICAPPALVTRLGSGFHEFFPEVSDRSALPVPAGRRGTPYVLFVSTIEGRKNHQYLFDVWDELAR RGVDTPRILCVGRLGWRAEPAIIKLIETDYLGGKVEIREDVSDIELKALYEGALFTVYPSIYEGWGLPVSESLANGKVCV LADRTSLPEVAGEFGVYVPLDDPAAAADVVAELLSRPGELARREEAIREKFQHTSWRIVAEVALQGCTLARTNPVRSALP TVRAAVEYPVRSLRMSTQGLMGSAMMDALEQAHAALILPGSVKSAHKVSGLLCRNSDWYAPEDWGSWARARKARVQFAVE ASEFDGEDEVLIYLALRFLEPALPATVRITLSGCGRSHRQQVRTEEAMMVWPVHARDFGSAIASDSDRLALELQLEIVGM DASVEAACRTMDSRELVFGLRSFCIVKGSDTVQRLRIAERQGYRSTVGMGEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86331; Mature: 86200
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMVLPDILNPDYQRARGDAARDAGDWLAAAKCYSRYLRFRRRDAGIWVQLGNVLKECGR CCCCCCHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHH FQQSERAYLRAMRLGLNDSDLHLQLGHLSKVRGQAGSARHHYLTAIRRQPMSVDAFEELV HHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHH KMGLEAEANTILLTERKTGEEPGEMLIFDVSDLIYYVGHHDNLSGIQRVQCCIIQAIVKY HCCCCCCCCEEEEEECCCCCCCCCEEEEEHHHHHEEECCCCCHHHHHHHHHHHHHHHHHH GLKPLDQIGFISFNRRSNGFMMLDRTRFLAWLDDLSLPPEQRCVPFDVAEAREGRIFPMG CCCCCHHCCEEEEECCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEEECC PLAAFIQPERTTLVLLGAAWVTPDYPTKIANLKRLFSARFVMVFHDFIPIFAKETCDQGT HHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH VEVFKEFIDQILPITDVALCVSRNTRDDLHRYCANAGICAPPALVTRLGSGFHEFFPEVS HHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHCCCCC DRSALPVPAGRRGTPYVLFVSTIEGRKNHQYLFDVWDELARRGVDTPRILCVGRLGWRAE CCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC PAIIKLIETDYLGGKVEIREDVSDIELKALYEGALFTVYPSIYEGWGLPVSESLANGKVC CCEEEEEECCCCCCEEEECCCCCHHHHHHHHCCCCEEECHHHHCCCCCCHHHHCCCCCEE VLADRTSLPEVAGEFGVYVPLDDPAAAADVVAELLSRPGELARREEAIREKFQHTSWRIV EEECCCCCHHHHHHCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHH AEVALQGCTLARTNPVRSALPTVRAAVEYPVRSLRMSTQGLMGSAMMDALEQAHAALILP HHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC GSVKSAHKVSGLLCRNSDWYAPEDWGSWARARKARVQFAVEASEFDGEDEVLIYLALRFL CCCCCHHHHHCEEECCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHH EPALPATVRITLSGCGRSHRQQVRTEEAMMVWPVHARDFGSAIASDSDRLALELQLEIVG CCCCCEEEEEEEECCCCHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCEEEEEEEEEEE MDASVEAACRTMDSRELVFGLRSFCIVKGSDTVQRLRIAERQGYRSTVGMGEA CCCHHHHHHHHCCCHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PMVLPDILNPDYQRARGDAARDAGDWLAAAKCYSRYLRFRRRDAGIWVQLGNVLKECGR CCCCCHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHH FQQSERAYLRAMRLGLNDSDLHLQLGHLSKVRGQAGSARHHYLTAIRRQPMSVDAFEELV HHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHH KMGLEAEANTILLTERKTGEEPGEMLIFDVSDLIYYVGHHDNLSGIQRVQCCIIQAIVKY HCCCCCCCCEEEEEECCCCCCCCCEEEEEHHHHHEEECCCCCHHHHHHHHHHHHHHHHHH GLKPLDQIGFISFNRRSNGFMMLDRTRFLAWLDDLSLPPEQRCVPFDVAEAREGRIFPMG CCCCCHHCCEEEEECCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEEECC PLAAFIQPERTTLVLLGAAWVTPDYPTKIANLKRLFSARFVMVFHDFIPIFAKETCDQGT HHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH VEVFKEFIDQILPITDVALCVSRNTRDDLHRYCANAGICAPPALVTRLGSGFHEFFPEVS HHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHCCCCC DRSALPVPAGRRGTPYVLFVSTIEGRKNHQYLFDVWDELARRGVDTPRILCVGRLGWRAE CCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC PAIIKLIETDYLGGKVEIREDVSDIELKALYEGALFTVYPSIYEGWGLPVSESLANGKVC CCEEEEEECCCCCCEEEECCCCCHHHHHHHHCCCCEEECHHHHCCCCCCHHHHCCCCCEE VLADRTSLPEVAGEFGVYVPLDDPAAAADVVAELLSRPGELARREEAIREKFQHTSWRIV EEECCCCCHHHHHHCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHH AEVALQGCTLARTNPVRSALPTVRAAVEYPVRSLRMSTQGLMGSAMMDALEQAHAALILP HHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC GSVKSAHKVSGLLCRNSDWYAPEDWGSWARARKARVQFAVEASEFDGEDEVLIYLALRFL CCCCCHHHHHCEEECCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHH EPALPATVRITLSGCGRSHRQQVRTEEAMMVWPVHARDFGSAIASDSDRLALELQLEIVG CCCCCEEEEEEEECCCCHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCEEEEEEEEEEE MDASVEAACRTMDSRELVFGLRSFCIVKGSDTVQRLRIAERQGYRSTVGMGEA CCCHHHHHHHHCCCHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA