Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is cbdB [H]
Identifier: 87198563
GI number: 87198563
Start: 588893
End: 589378
Strand: Direct
Name: cbdB [H]
Synonym: Saro_0539
Alternate gene names: 87198563
Gene position: 588893-589378 (Clockwise)
Preceding gene: 87198562
Following gene: 87198564
Centisome position: 16.53
GC content: 59.47
Gene sequence:
>486_bases ATGAGCGCGCTCGATGAAGTCTGCGCCTTCCTCCACCGCGAGGCGCGCCTGCTCGATGACCGGCAGTTGGATGTCTGGCT GGAATGCTATGCGCCCGATTGCACCTACTGGATGCCAGCCTGGACCGACGATGACGAGCTGGTCACCGATCCGCAGAGCC AGATCTCATTGATCTACTACGCCAACCGGCAGGGGTTGGAGGACCGCGTCTACCGGCTCGAGACAGAGCGTTCCAGCGCC AGCACGCCTGAGCCGCGCACTGTCCACATGCTTGCGAATATCGAACTGCTGGAAGATCGCGGGGACGAACTGGACGTGCG ATACAACTGGCACACGCTCAGCCATCGTTTCAAGGTGACCAGCCAGTTCTTTGGCGTGACCTTCTGCACGCTGCGACGGA GCATGGACGGCTTCAGCATTGGCTCCAAGAAGGTCGTGCTGAAGAACGACTACATCCACCAGGTGATCGATGTCTATCAT GTCTGA
Upstream 100 bases:
>100_bases TCAGCAGCGAGCGCAGCGAGGATGAAGGCTTGTTCGTCCGCCAGCACGAATACTGGGCGAAGACCCTTCTCGAAGGCCTG GCCCGGCAGGAGGAAATGGC
Downstream 100 bases:
>100_bases GTACGGGGCGCATTTCGCGGGTCGTTTTGACGGCAAGGTCATGGTCGTGACCGGGGCGGCGCAGGGGATCGGGCGCGGCG TGGCGGAGCGCGCGGCTGCC
Product: 2-chlorobenzoate 1,2-dioxygenase
Products: NA
Alternate protein names: 2-chlorobenzoate 1,2-dioxygenase [H]
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSALDEVCAFLHREARLLDDRQLDVWLECYAPDCTYWMPAWTDDDELVTDPQSQISLIYYANRQGLEDRVYRLETERSSA STPEPRTVHMLANIELLEDRGDELDVRYNWHTLSHRFKVTSQFFGVTFCTLRRSMDGFSIGSKKVVLKNDYIHQVIDVYH V
Sequences:
>Translated_161_residues MSALDEVCAFLHREARLLDDRQLDVWLECYAPDCTYWMPAWTDDDELVTDPQSQISLIYYANRQGLEDRVYRLETERSSA STPEPRTVHMLANIELLEDRGDELDVRYNWHTLSHRFKVTSQFFGVTFCTLRRSMDGFSIGSKKVVLKNDYIHQVIDVYH V >Mature_160_residues SALDEVCAFLHREARLLDDRQLDVWLECYAPDCTYWMPAWTDDDELVTDPQSQISLIYYANRQGLEDRVYRLETERSSAS TPEPRTVHMLANIELLEDRGDELDVRYNWHTLSHRFKVTSQFFGVTFCTLRRSMDGFSIGSKKVVLKNDYIHQVIDVYHV
Specific function: Component of 2-halobenzoate dioxygenase multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into 2-halobenzoate to form catechol [H]
COG id: COG5517
COG function: function code Q; Small subunit of phenylpropionate dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017641 - InterPro: IPR000391 [H]
Pfam domain/function: PF00866 Ring_hydroxyl_B [H]
EC number: =1.14.12.13 [H]
Molecular weight: Translated: 18941; Mature: 18810
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALDEVCAFLHREARLLDDRQLDVWLECYAPDCTYWMPAWTDDDELVTDPQSQISLIYY CCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEECCCCCCCCCCEECCHHHEEEEEE ANRQGLEDRVYRLETERSSASTPEPRTVHMLANIELLEDRGDELDVRYNWHTLSHRFKVT ECCCCCHHHHEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEECCCEEEEH SQFFGVTFCTLRRSMDGFSIGSKKVVLKNDYIHQVIDVYHV HHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHCC >Mature Secondary Structure SALDEVCAFLHREARLLDDRQLDVWLECYAPDCTYWMPAWTDDDELVTDPQSQISLIYY CHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEECCCCCCCCCCEECCHHHEEEEEE ANRQGLEDRVYRLETERSSASTPEPRTVHMLANIELLEDRGDELDVRYNWHTLSHRFKVT ECCCCCHHHHEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEECCCEEEEH SQFFGVTFCTLRRSMDGFSIGSKKVVLKNDYIHQVIDVYHV HHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7530709; 1370284 [H]