Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198449
Identifier: 87198449
GI number: 87198449
Start: 461134
End: 462072
Strand: Direct
Name: 87198449
Synonym: Saro_0424
Alternate gene names: NA
Gene position: 461134-462072 (Clockwise)
Preceding gene: 87198448
Following gene: 87198452
Centisome position: 12.95
GC content: 69.12
Gene sequence:
>939_bases ATGTCGGTTCGGATGGCACTGGCGAAACTGGCGGCGGCAGCCGCAGGCGGGGCGATGCTCGGCGGCGGCGCGGTGCATGT GTCGGAGGCACCCTCGAAGGGTGAAATCCACCACGTGAAGCCGGTCAAGGTGAAGAAAGCGAAGCCTGCCAAGCGAGTCG TCGCGCGCCGCGCCGCGCCACGCGAAGTGCATCGCGCGCGCCGCGTCGTCACCACCACGACCACCAGGACCTGCGAGCCG GCGCAGCAGATGGCGATGGTGCCGGTGCCCTACATGCCGCCCATGCCGCCCCAGCCTGTCGGTGGATCGGGTGGCGGCGT GCCCGTGGTGATCGGCGGCGGCGGCATCGGCGGCTTCGGGGGTGGCTTCTTCGGCGGGTTCTTCGGCGGAGGCAGCAGCG GCGGCAGCGTCGTCGTCTCCTCCACCAGCACAGGCTCCACCTCGACGTCAGGCGGTTCGACCTCGACGTCCGGCGGATCG ACTTCGACCAGCTCGGGCGGCAGCTCGACCACGACGGGTGGGGTCTCCACCTCGACCGGCGGCGTCTCGACCTCGACCTC CACGTCTTCGGGCAATGTCTCGACGTCGAGCGGGTCGGTCAGCACGTCTTCGGGCAACGTCTCGACCAGTTCCGGCAACG TCAGCACCTCTTCGGGGAACGTGAGCACGAGTTCGTCGACTTCCACATCGTCGGGCAATGTCAGCACCAGCTCCTCGACG TCCTCGTCCACTTCGAGCAGCACCAGCTCGTCGACCTCGACTTCCTCTTCGACCTCCAGTTCGACCTCGTCCTCGACGTC CAGCTCGAACGGCGGGACGACGACGTCGTCGACCAGCGGCGGCACCGAGGTGCCCGAGCCTTCGATGGTCATCCTGTTCG GCGCGGCGGCCGCGGGGCTCGTCGCGCGGCGGCGTTACGGCAAGCCGAAGAGCGCCTGA
Upstream 100 bases:
>100_bases TGCTGGCGGCATCTGCGTTGTTCGATGGGTCGGGAAAGGCCGCAGGACGTTAACCCGTTCCTGCTAGGGCTCCCACCCAG ATAGAACGAGAGCAAAGATC
Downstream 100 bases:
>100_bases GCAAAGGATTTGCTGCCTGCTCCGGCGGGCGGACGGGAAGGGCGGTCTCCGGGGGGAGCCGCCCTTTTTCGTACCTGGTT CGCGGTGCGGAAGGCGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MSVRMALAKLAAAAAGGAMLGGGAVHVSEAPSKGEIHHVKPVKVKKAKPAKRVVARRAAPREVHRARRVVTTTTTRTCEP AQQMAMVPVPYMPPMPPQPVGGSGGGVPVVIGGGGIGGFGGGFFGGFFGGGSSGGSVVVSSTSTGSTSTSGGSTSTSGGS TSTSSGGSSTTTGGVSTSTGGVSTSTSTSSGNVSTSSGSVSTSSGNVSTSSGNVSTSSGNVSTSSSTSTSSGNVSTSSST SSSTSSSTSSSTSTSSSTSSSTSSSTSSSNGGTTTSSTSGGTEVPEPSMVILFGAAAAGLVARRRYGKPKSA
Sequences:
>Translated_312_residues MSVRMALAKLAAAAAGGAMLGGGAVHVSEAPSKGEIHHVKPVKVKKAKPAKRVVARRAAPREVHRARRVVTTTTTRTCEP AQQMAMVPVPYMPPMPPQPVGGSGGGVPVVIGGGGIGGFGGGFFGGFFGGGSSGGSVVVSSTSTGSTSTSGGSTSTSGGS TSTSSGGSSTTTGGVSTSTGGVSTSTSTSSGNVSTSSGSVSTSSGNVSTSSGNVSTSSGNVSTSSSTSTSSGNVSTSSST SSSTSSSTSSSTSTSSSTSSSTSSSTSSSNGGTTTSSTSGGTEVPEPSMVILFGAAAAGLVARRRYGKPKSA >Mature_311_residues SVRMALAKLAAAAAGGAMLGGGAVHVSEAPSKGEIHHVKPVKVKKAKPAKRVVARRAAPREVHRARRVVTTTTTRTCEPA QQMAMVPVPYMPPMPPQPVGGSGGGVPVVIGGGGIGGFGGGFFGGFFGGGSSGGSVVVSSTSTGSTSTSGGSTSTSGGST STSSGGSSTTTGGVSTSTGGVSTSTSTSSGNVSTSSGSVSTSSGNVSTSSGNVSTSSGNVSTSSSTSTSSGNVSTSSSTS SSTSSSTSSSTSTSSSTSSSTSSSTSSSNGGTTTSSTSGGTEVPEPSMVILFGAAAAGLVARRRYGKPKSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29503; Mature: 29372
Theoretical pI: Translated: 11.96; Mature: 11.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRMALAKLAAAAAGGAMLGGGAVHVSEAPSKGEIHHVKPVKVKKAKPAKRVVARRAAP CCHHHHHHHHHHHHCCCEEECCCEEEECCCCCCCCEEECCCEEECCCCHHHHHHHHCCCH REVHRARRVVTTTTTRTCEPAQQMAMVPVPYMPPMPPQPVGGSGGGVPVVIGGGGIGGFG HHHHHHHEEEEECCCCCCCHHHHHEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC GGFFGGFFGGGSSGGSVVVSSTSTGSTSTSGGSTSTSGGSTSTSSGGSSTTTGGVSTSTG CHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GVSTSTSTSSGNVSTSSGSVSTSSGNVSTSSGNVSTSSGNVSTSSSTSTSSGNVSTSSST CCCCCCCCCCCCEECCCCCEECCCCCEECCCCCEECCCCCCCCCCCCCCCCCCEECCCCC SSSTSSSTSSSTSTSSSTSSSTSSSTSSSNGGTTTSSTSGGTEVPEPSMVILFGAAAAGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHH VARRRYGKPKSA HHHHHCCCCCCC >Mature Secondary Structure SVRMALAKLAAAAAGGAMLGGGAVHVSEAPSKGEIHHVKPVKVKKAKPAKRVVARRAAP CHHHHHHHHHHHHCCCEEECCCEEEECCCCCCCCEEECCCEEECCCCHHHHHHHHCCCH REVHRARRVVTTTTTRTCEPAQQMAMVPVPYMPPMPPQPVGGSGGGVPVVIGGGGIGGFG HHHHHHHEEEEECCCCCCCHHHHHEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC GGFFGGFFGGGSSGGSVVVSSTSTGSTSTSGGSTSTSGGSTSTSSGGSSTTTGGVSTSTG CHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GVSTSTSTSSGNVSTSSGSVSTSSGNVSTSSGNVSTSSGNVSTSSSTSTSSGNVSTSSST CCCCCCCCCCCCEECCCCCEECCCCCEECCCCCEECCCCCCCCCCCCCCCCCCEECCCCC SSSTSSSTSSSTSTSSSTSSSTSSSTSSSNGGTTTSSTSGGTEVPEPSMVILFGAAAAGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHH VARRRYGKPKSA HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA