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The map label for this gene is ytnM [H]

Identifier: 87198433

GI number: 87198433

Start: 447796

End: 448563

Strand: Direct

Name: ytnM [H]

Synonym: Saro_0408

Alternate gene names: 87198433

Gene position: 447796-448563 (Clockwise)

Preceding gene: 87198431

Following gene: 87198434

Centisome position: 12.57

GC content: 65.36

Gene sequence:

>768_bases
ATGGACTTTCTTGCCGGCATCGATTTCACGGCGCTACTGCCCTTCATCGCGGTCGGCTTTGCCGCGCAGATGGTGGACGG
TGCGCTCGGCATGGCCTTCGGGGTCATCTCGAACACCTTGATGGTGGGCGTCCTGGGCATTCCGCCGGCCCTCGCCTCGC
AGCGCGTGCACATCGTCGAATGCTTCACCACGGCGACGTCAGGCATCAGCCACCTGCTGCACGGCAACGTCGACAAGAAG
CTGTTCTTTCGGCTGCTGATCCCGGGCATGGCCGGTGGCATCCTTGGTGCCTACGTCCTCTCCTCGCTCGATGCCTCGCT
GGTGAAGCCGTGGGTCCTGCTCTATCTCTCGGCCATCGGCATCTACCTGCTGGTGCGCGGCATCCTCTATCCGCCCAAGA
TCAAGGAAGCGGGCTGGGTGGCGCCGCTCGGCCTGCTCGGCGGTTTCCTCGATGCGGCGGGCGGCGGCGGCTGGGGCCCG
GTCGTGACCTCGAACCTGCTGATCCAGGGCGCCGATCCGCGCAAGGTCGTGGGCACGGTCAACACGGTCGAGTTTTTCCT
GACGCTCACCGTCTCGGCCACCTTCATCTGGCATCTGGGCGTTGCAGACGTTGCCGGCGCCACGCTCGGCTTCCTCATCG
GCGGTCTTGCCGCCGCCCCCTTCGGAGCCTGGGCAGCCAAGCACATTCCCGCCAAGGCCATGCTCATCATGGTTGGCGTC
GTGCTCACCCTCACAAGCCTTTACGGCGCCTACAAGGCCTTTGCCTGA

Upstream 100 bases:

>100_bases
TCGCAAAAAACTCTCCCTTTAAGGTAGAGTATAATTTCTGCTTTTCGGCTAGAGATCGCCGTGCGCTACCCAGCGCCCCG
TATCAGGGATGGGATTCGCG

Downstream 100 bases:

>100_bases
CGGCTTGGCCGCGCCCAGCGCCAATCATCCGTTAACCAAGTTCTGCGAACACTTGCGCGTGGCGGGGGCGAATCTCCCGC
CGGAGGGCAAGATCATGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MDFLAGIDFTALLPFIAVGFAAQMVDGALGMAFGVISNTLMVGVLGIPPALASQRVHIVECFTTATSGISHLLHGNVDKK
LFFRLLIPGMAGGILGAYVLSSLDASLVKPWVLLYLSAIGIYLLVRGILYPPKIKEAGWVAPLGLLGGFLDAAGGGGWGP
VVTSNLLIQGADPRKVVGTVNTVEFFLTLTVSATFIWHLGVADVAGATLGFLIGGLAAAPFGAWAAKHIPAKAMLIMVGV
VLTLTSLYGAYKAFA

Sequences:

>Translated_255_residues
MDFLAGIDFTALLPFIAVGFAAQMVDGALGMAFGVISNTLMVGVLGIPPALASQRVHIVECFTTATSGISHLLHGNVDKK
LFFRLLIPGMAGGILGAYVLSSLDASLVKPWVLLYLSAIGIYLLVRGILYPPKIKEAGWVAPLGLLGGFLDAAGGGGWGP
VVTSNLLIQGADPRKVVGTVNTVEFFLTLTVSATFIWHLGVADVAGATLGFLIGGLAAAPFGAWAAKHIPAKAMLIMVGV
VLTLTSLYGAYKAFA
>Mature_255_residues
MDFLAGIDFTALLPFIAVGFAAQMVDGALGMAFGVISNTLMVGVLGIPPALASQRVHIVECFTTATSGISHLLHGNVDKK
LFFRLLIPGMAGGILGAYVLSSLDASLVKPWVLLYLSAIGIYLLVRGILYPPKIKEAGWVAPLGLLGGFLDAAGGGGWGP
VVTSNLLIQGADPRKVVGTVNTVEFFLTLTVSATFIWHLGVADVAGATLGFLIGGLAAAPFGAWAAKHIPAKAMLIMVGV
VLTLTSLYGAYKAFA

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 26368; Mature: 26368

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]