Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198434
Identifier: 87198434
GI number: 87198434
Start: 448658
End: 449185
Strand: Direct
Name: 87198434
Synonym: Saro_0409
Alternate gene names: NA
Gene position: 448658-449185 (Clockwise)
Preceding gene: 87198433
Following gene: 87198437
Centisome position: 12.6
GC content: 67.61
Gene sequence:
>528_bases ATGGCGCGGTTCGATGCCAGTGGAATGACCATCGTGGAAATGCGCGAGTTCGCCAGCTTTACCGCGGGCGAACAGCGCTA CATCCGCCGCAGCCTCGACATCGCGCTCGAGCGCGGGGAGGCGATTGAACGCTGGGCTCGCAACGCCGAAGAGGCAGCCG CCATCCGCCGCCAGACCATCATGTACCGCGATCTCGCCGATCTGCGAGGGATGCTTCCGCAAGTCGAGGACGTCGAGACG CTCGATCCCTTCATGGGGCGGCTTGTGGCCCTGTCGGCCTTCGATCTCGCGCAGGAACGGCTCGACGGCTTTTCCGCCTA CCGCTTCCTCTACGAACGGCTCCTCGGCGCTGAAGTGCGCCCCTGGCTACCTTCGGCCTTCTGCGGGGCCGCCGCGCTTC CGGTGATCCGGCCCACGCGCCGCCGCGAGCTTCTCCAGTCGATCAGCGAAGCCGCAGCCACCGCGCACGGCTGGTCGATG CGCGCGCCGCAGTTCTACCCCCAGTTCGTCGAGGCGGAAGCGGCCTGA
Upstream 100 bases:
>100_bases GCCTGACGGCTTGGCCGCGCCCAGCGCCAATCATCCGTTAACCAAGTTCTGCGAACACTTGCGCGTGGCGGGGGCGAATC TCCCGCCGGAGGGCAAGATC
Downstream 100 bases:
>100_bases GGCCCGTTCAGGGCACCAGCACGGTATCGCGCGCCACTTCGTTGGTCTGCGGATAGTCGAGCGTATAGTGCAGACCCCGG CTCTCGTGCCGGGCGCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MARFDASGMTIVEMREFASFTAGEQRYIRRSLDIALERGEAIERWARNAEEAAAIRRQTIMYRDLADLRGMLPQVEDVET LDPFMGRLVALSAFDLAQERLDGFSAYRFLYERLLGAEVRPWLPSAFCGAAALPVIRPTRRRELLQSISEAAATAHGWSM RAPQFYPQFVEAEAA
Sequences:
>Translated_175_residues MARFDASGMTIVEMREFASFTAGEQRYIRRSLDIALERGEAIERWARNAEEAAAIRRQTIMYRDLADLRGMLPQVEDVET LDPFMGRLVALSAFDLAQERLDGFSAYRFLYERLLGAEVRPWLPSAFCGAAALPVIRPTRRRELLQSISEAAATAHGWSM RAPQFYPQFVEAEAA >Mature_174_residues ARFDASGMTIVEMREFASFTAGEQRYIRRSLDIALERGEAIERWARNAEEAAAIRRQTIMYRDLADLRGMLPQVEDVETL DPFMGRLVALSAFDLAQERLDGFSAYRFLYERLLGAEVRPWLPSAFCGAAALPVIRPTRRRELLQSISEAAATAHGWSMR APQFYPQFVEAEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19851; Mature: 19720
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARFDASGMTIVEMREFASFTAGEQRYIRRSLDIALERGEAIERWARNAEEAAAIRRQTI CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHH MYRDLADLRGMLPQVEDVETLDPFMGRLVALSAFDLAQERLDGFSAYRFLYERLLGAEVR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PWLPSAFCGAAALPVIRPTRRRELLQSISEAAATAHGWSMRAPQFYPQFVEAEAA CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure ARFDASGMTIVEMREFASFTAGEQRYIRRSLDIALERGEAIERWARNAEEAAAIRRQTI CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHH MYRDLADLRGMLPQVEDVETLDPFMGRLVALSAFDLAQERLDGFSAYRFLYERLLGAEVR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PWLPSAFCGAAALPVIRPTRRRELLQSISEAAATAHGWSMRAPQFYPQFVEAEAA CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA