Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198287
Identifier: 87198287
GI number: 87198287
Start: 278799
End: 279641
Strand: Direct
Name: 87198287
Synonym: Saro_0262
Alternate gene names: NA
Gene position: 278799-279641 (Clockwise)
Preceding gene: 87198286
Following gene: 87198288
Centisome position: 7.83
GC content: 59.07
Gene sequence:
>843_bases ATGACCGAGGTGACGAAAGCGGCTGAAGCGCGCGCGGCATCGGCAAGGTCGAAGACCCTTCTGAAGGTCGCGGTGCTGGT GTTCGCAATAGAGTTGGCTGCGTGCTCGTCGCAAGAAGCTCCGGACAACAATGATGCGGCCACAGAGGCACAGGTGCCTG CGCCAGAATACGCGCAGCGCGATGGCGATCAGTACATCTATGTCGGCGCGCTATCGGATGGAGAAAGGGCACAGGGCAAG CAAGCTGCCGTTGTGACATACCGATACCTGGGAAGCTTTGGGGACACACAAAAGCTCGAAATGCTCTCTGATGCCGGGGC TCGGCTTGCTATAGTCGAATGCTCAGATCCCTGTCGTGTCGCAAAGCACACGGACAACTTCGGCGTTGTGACTCGGGTAG CTGTTCAGCCCGCGACCATCGTGGCTGCAGCATTCAGAGACGCTGCATTGGGCCACATGATTCTGGCCCAAATGGGCGAG GAACTGTCGGACGCAAAGAACCCCTCATTATCCCCCGCTAAAGAACCAAGCATATCTCCCCCGACGATAACCGCAGGCGA CCAGTCAGACTATCGCGGCAAGAAGGGACGCTGTCGGCTGACAGTAGAGGGTACTTCGTACATGAATGGCTCCTGCTGGG TTCGCCTCGACAATGGCGGCAGTTTCCAGATCATGTCGCTGGACCAGTCATACTTCGCCCAGCTTTCACGCTCCGGTAGT CAAGCAAGTGGCTTCTGGAATGCTGCGCCGGGAGCGGCCCACGCGCAAGTCGAGCTGGGCCCCATGGACCGGGTGGGAGC CTGTTGGACCAACGCCACCGCCGAGATTTGCGCATGGAGATGA
Upstream 100 bases:
>100_bases ACATCGGCCGCCGCTTCCGCAACGACACCGAACGCCTCGAAAAGCTATTCGAACTCTACACCAAAATGACTGGCGGACGA TCCTCAGAAGGTGGAGCGGC
Downstream 100 bases:
>100_bases CACCGTTCAGCATCGCCAGCCCCTCTGGCTGCGTGGGTAGGATTTGCCGCCCAGCGCCAGTCCGAGAACCTCCGGCACGT GCCAAGGTAGCTCTTGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MTEVTKAAEARAASARSKTLLKVAVLVFAIELAACSSQEAPDNNDAATEAQVPAPEYAQRDGDQYIYVGALSDGERAQGK QAAVVTYRYLGSFGDTQKLEMLSDAGARLAIVECSDPCRVAKHTDNFGVVTRVAVQPATIVAAAFRDAALGHMILAQMGE ELSDAKNPSLSPAKEPSISPPTITAGDQSDYRGKKGRCRLTVEGTSYMNGSCWVRLDNGGSFQIMSLDQSYFAQLSRSGS QASGFWNAAPGAAHAQVELGPMDRVGACWTNATAEICAWR
Sequences:
>Translated_280_residues MTEVTKAAEARAASARSKTLLKVAVLVFAIELAACSSQEAPDNNDAATEAQVPAPEYAQRDGDQYIYVGALSDGERAQGK QAAVVTYRYLGSFGDTQKLEMLSDAGARLAIVECSDPCRVAKHTDNFGVVTRVAVQPATIVAAAFRDAALGHMILAQMGE ELSDAKNPSLSPAKEPSISPPTITAGDQSDYRGKKGRCRLTVEGTSYMNGSCWVRLDNGGSFQIMSLDQSYFAQLSRSGS QASGFWNAAPGAAHAQVELGPMDRVGACWTNATAEICAWR >Mature_279_residues TEVTKAAEARAASARSKTLLKVAVLVFAIELAACSSQEAPDNNDAATEAQVPAPEYAQRDGDQYIYVGALSDGERAQGKQ AAVVTYRYLGSFGDTQKLEMLSDAGARLAIVECSDPCRVAKHTDNFGVVTRVAVQPATIVAAAFRDAALGHMILAQMGEE LSDAKNPSLSPAKEPSISPPTITAGDQSDYRGKKGRCRLTVEGTSYMNGSCWVRLDNGGSFQIMSLDQSYFAQLSRSGSQ ASGFWNAAPGAAHAQVELGPMDRVGACWTNATAEICAWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29692; Mature: 29561
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEVTKAAEARAASARSKTLLKVAVLVFAIELAACSSQEAPDNNDAATEAQVPAPEYAQR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHC DGDQYIYVGALSDGERAQGKQAAVVTYRYLGSFGDTQKLEMLSDAGARLAIVECSDPCRV CCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCHH AKHTDNFGVVTRVAVQPATIVAAAFRDAALGHMILAQMGEELSDAKNPSLSPAKEPSISP HHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PTITAGDQSDYRGKKGRCRLTVEGTSYMNGSCWVRLDNGGSFQIMSLDQSYFAQLSRSGS CEEECCCCCCCCCCCCEEEEEECCCCEECCEEEEEECCCCCEEEEECCHHHHHHHHCCCC QASGFWNAAPGAAHAQVELGPMDRVGACWTNATAEICAWR CCCCCCCCCCCCCEEEEEECCCCCCCHHHCCCCHHHEECC >Mature Secondary Structure TEVTKAAEARAASARSKTLLKVAVLVFAIELAACSSQEAPDNNDAATEAQVPAPEYAQR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHC DGDQYIYVGALSDGERAQGKQAAVVTYRYLGSFGDTQKLEMLSDAGARLAIVECSDPCRV CCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCHH AKHTDNFGVVTRVAVQPATIVAAAFRDAALGHMILAQMGEELSDAKNPSLSPAKEPSISP HHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PTITAGDQSDYRGKKGRCRLTVEGTSYMNGSCWVRLDNGGSFQIMSLDQSYFAQLSRSGS CEEECCCCCCCCCCCCEEEEEECCCCEECCEEEEEECCCCCEEEEECCHHHHHHHHCCCC QASGFWNAAPGAAHAQVELGPMDRVGACWTNATAEICAWR CCCCCCCCCCCCCEEEEEECCCCCCCHHHCCCCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA