Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198288
Identifier: 87198288
GI number: 87198288
Start: 279989
End: 281029
Strand: Direct
Name: 87198288
Synonym: Saro_0263
Alternate gene names: NA
Gene position: 279989-281029 (Clockwise)
Preceding gene: 87198287
Following gene: 87198289
Centisome position: 7.86
GC content: 54.37
Gene sequence:
>1041_bases ATGCTGGTAGAGTTCGTCACCATCGACGGACGAGCCATTCCGCTCCACCCTCTTGGCGGTTGTTCTGGCAAAGGCGGAGA TTCGCATGGGGGGACAGTGCGAGTTGCAGACGGCCAATGCATTAAGACGCGTTGTCCGAAGTGCAACGAGCCAGTTTTCT TCATTCGTCACAACGGTGGCAGCGTTTACATAGATCCGCCTTTAGGCCCACCTTGGTTGCGGCATCCTTGTATGCCGGAC CAAGCCCGAAAACACGTACCGGAGATCAACCCAAAGATATCCAGCGTCAGTCCCGAAGCCAGCCACATGTTGGGTAGAGT GCGCGGTCTAATTACTGGTGTGGTGATCAAGGCCGAGCTAGTATCGGGTGGCAAACAGGCGGTTCTGACCATTGCAGTGG CGCAACCTGATCCTCTGGTGCTTCTGATGCGCAGCCCGTCATTCTATTTTGTGGGTAGGATGGTCATTCTGCGCCCCGCC AAAAGGGCACTTTATTCAGCGGAAGATCCCGCCGACGTCTTTCTGATCGATCGGGCGCTGTACGTGCCAAGCGGCCTTAG AAGTCCCGAGTTTCCTCTGCTGCAAGAAGGGGCATCAGGCACTGCCGGTCCGGACGACGCAAAAACAAGGTTGAAGCTTG ATGGAGAAACCCGCGGTGTGGCCAAGGCATATAGGAAGTTCCTCATGCAAGGGCTTTCAGGTCCCTGGCAAGCGCAGGAA CTCGCCTCGATTATTCATCTGTTGGATGGACGGTCGCAGGACGACGCCGTTCATTTAGCAGCGGTCTTGTCCTTGCAAAA ATGTATTGATCACGGCGACCCCAATGCGGCGCTCTTATTGGCAAAAAATCTTCATTCGGAGAGACGGGAAAAGCTGGCTT CTTGGTTCAGGATGTACTCGCCGCTTATTATCGATCTGAGTCGCTTAGATAAGAAGTTTTGGTTCGTACGAGATGCCGAG CACAAGATTCTGCCTTTCAACATGGAAGGCGCCAGATCCAATCCGGTATTTCGGCATGGCCGGAACGCACAAAGGCGCTG A
Upstream 100 bases:
>100_bases GTGGATGAGGTGTACGCCCTGATACGAAGCGTTGGTTTCCTGCGCGCAAGGGTATGATCGTTGATGGGAGAGCAACCTGG CTCAGTGCAAGAATTGCGGC
Downstream 100 bases:
>100_bases GGATGGACAGGCAGCGCGATAACTGTGAATAACGAAAAACACCCGAGCCTACCGTTGACGAAGTGACAGAATGACCGCCG ACAAACCGATCCCTGCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MLVEFVTIDGRAIPLHPLGGCSGKGGDSHGGTVRVADGQCIKTRCPKCNEPVFFIRHNGGSVYIDPPLGPPWLRHPCMPD QARKHVPEINPKISSVSPEASHMLGRVRGLITGVVIKAELVSGGKQAVLTIAVAQPDPLVLLMRSPSFYFVGRMVILRPA KRALYSAEDPADVFLIDRALYVPSGLRSPEFPLLQEGASGTAGPDDAKTRLKLDGETRGVAKAYRKFLMQGLSGPWQAQE LASIIHLLDGRSQDDAVHLAAVLSLQKCIDHGDPNAALLLAKNLHSERREKLASWFRMYSPLIIDLSRLDKKFWFVRDAE HKILPFNMEGARSNPVFRHGRNAQRR
Sequences:
>Translated_346_residues MLVEFVTIDGRAIPLHPLGGCSGKGGDSHGGTVRVADGQCIKTRCPKCNEPVFFIRHNGGSVYIDPPLGPPWLRHPCMPD QARKHVPEINPKISSVSPEASHMLGRVRGLITGVVIKAELVSGGKQAVLTIAVAQPDPLVLLMRSPSFYFVGRMVILRPA KRALYSAEDPADVFLIDRALYVPSGLRSPEFPLLQEGASGTAGPDDAKTRLKLDGETRGVAKAYRKFLMQGLSGPWQAQE LASIIHLLDGRSQDDAVHLAAVLSLQKCIDHGDPNAALLLAKNLHSERREKLASWFRMYSPLIIDLSRLDKKFWFVRDAE HKILPFNMEGARSNPVFRHGRNAQRR >Mature_346_residues MLVEFVTIDGRAIPLHPLGGCSGKGGDSHGGTVRVADGQCIKTRCPKCNEPVFFIRHNGGSVYIDPPLGPPWLRHPCMPD QARKHVPEINPKISSVSPEASHMLGRVRGLITGVVIKAELVSGGKQAVLTIAVAQPDPLVLLMRSPSFYFVGRMVILRPA KRALYSAEDPADVFLIDRALYVPSGLRSPEFPLLQEGASGTAGPDDAKTRLKLDGETRGVAKAYRKFLMQGLSGPWQAQE LASIIHLLDGRSQDDAVHLAAVLSLQKCIDHGDPNAALLLAKNLHSERREKLASWFRMYSPLIIDLSRLDKKFWFVRDAE HKILPFNMEGARSNPVFRHGRNAQRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38076; Mature: 38076
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVEFVTIDGRAIPLHPLGGCSGKGGDSHGGTVRVADGQCIKTRCPKCNEPVFFIRHNGG CEEEEEEECCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCC SVYIDPPLGPPWLRHPCMPDQARKHVPEINPKISSVSPEASHMLGRVRGLITGVVIKAEL EEEECCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEHH VSGGKQAVLTIAVAQPDPLVLLMRSPSFYFVGRMVILRPAKRALYSAEDPADVFLIDRAL HCCCCEEEEEEEEECCCCEEEEEECCCEEEEEEEEEEEHHHHHHCCCCCCCCEEEEEHHE YVPSGLRSPEFPLLQEGASGTAGPDDAKTRLKLDGETRGVAKAYRKFLMQGLSGPWQAQE ECCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHH LASIIHLLDGRSQDDAVHLAAVLSLQKCIDHGDPNAALLLAKNLHSERREKLASWFRMYS HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHC PLIIDLSRLDKKFWFVRDAEHKILPFNMEGARSNPVFRHGRNAQRR CCEEEHHHHCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLVEFVTIDGRAIPLHPLGGCSGKGGDSHGGTVRVADGQCIKTRCPKCNEPVFFIRHNGG CEEEEEEECCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCC SVYIDPPLGPPWLRHPCMPDQARKHVPEINPKISSVSPEASHMLGRVRGLITGVVIKAEL EEEECCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEHH VSGGKQAVLTIAVAQPDPLVLLMRSPSFYFVGRMVILRPAKRALYSAEDPADVFLIDRAL HCCCCEEEEEEEEECCCCEEEEEECCCEEEEEEEEEEEHHHHHHCCCCCCCCEEEEEHHE YVPSGLRSPEFPLLQEGASGTAGPDDAKTRLKLDGETRGVAKAYRKFLMQGLSGPWQAQE ECCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHH LASIIHLLDGRSQDDAVHLAAVLSLQKCIDHGDPNAALLLAKNLHSERREKLASWFRMYS HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHC PLIIDLSRLDKKFWFVRDAEHKILPFNMEGARSNPVFRHGRNAQRR CCEEEHHHHCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA