Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is yeeA [H]

Identifier: 87198286

GI number: 87198286

Start: 276073

End: 278802

Strand: Direct

Name: yeeA [H]

Synonym: Saro_0261

Alternate gene names: 87198286

Gene position: 276073-278802 (Clockwise)

Preceding gene: 87198285

Following gene: 87198287

Centisome position: 7.75

GC content: 56.08

Gene sequence:

>2730_bases
ATGAACCCCGTAGAGATTGAAGAAGCCGTCTCGGACCTCGCTCGCGCACCCTATGACGCTTCCGAGTTTCCGTTCCAGTT
CCTTGCCGCTTTCGGCAACAAGCAGACCACGCTGCAGCGATTGCGGGCGGGCAATTCCAATCAGTCCGATCTTCCGGGCG
CCGTCTTGCAGCGTAACCATATCCACATAGCAACTTGCGATGCGGGCAACGTCGACAGAACGCTGGCCGCTCTTCGCAAG
AGTCCCAAGACGGCGTCACAAAAGGCTCGGTTCATCCTCGCCACTGATGGCGTGGCCTTCCAGGCGGAGGACATGGCCAG
TGGCGAGACAGTAGCCTGCAATTACGCCGCCTTCCCGGACAAGTTTGCCTTCTTCCTGCCACTGGCGGGCATAACCACGG
TCCAGCAGATCCGTGAAAGCAGCTTTGACATCAAGGCGACCGGCCGCCTTAACAAGCTCTATGTCGAACTGCTGAAGGAC
AACCCTGACTGGGCCAGCAGAAGCGAGGACATGAACCACTTCATGGCCCGCCTGATCTTCTGCTTCTTTGCCGAGGATAC
CGACATTTTCGTCGGCGAAGGCCTGTTCAGCCGCACCGTCGAGACCATGAGTGCGCGTGATGCGTCCGACACGCACATGG
TCATCGCCGAAATTTTCCGCGCGATGGACACCAGGCTGGCCGATCGCGCTGCCGCCGGGATCAAGAGCTGGGCCGATGTC
TTCCCCTATGTGAACGGGCAGCTCTTCTCGGGATCCACCGAATGCCCGCGCTTCAGCAAGATCGCGCGGTCATACCTGCT
GCATATCGGCAGCCTCGATTGGCAGAAGATCAACCCGGACATCTTCGGCTCGATGATCCAGGCCGTGGCCGACGATGAGG
AGCGCGGTGCGCTCGGCATGCATTACACCAGCGTGCCGAACATCCTGAAGGTTCTGAACCCGCTGTTCCTCGATGACCTG
CGGGCGAAGCTTGAGGAAGCGGGTGACAACAGCCGCAAGCTGCTCAACCTGCGCAACCGCATGGCCAAGATCCGGGTGTT
CGATCCGGCCTGCGGATCGGGCAACTTCCTCGTCATCGCTTACAAGCAGATGCGCGAGCTTGAGGCGGAGATCAACCGGC
GGCGCGGCGAGGCCGACCGGCGCAGCGACATTCCGCTGACCAACTTCCGCGGTATCGAACTACGCAACTTTCCCGCCGAG
ATCGCCCGGCTGGCCCTGATTATCGCGGAGTACCAGTGCGACGTGCTCTATCGCGGGCAGAAGGAGGCGCTAGCCGAGTT
CTTGCCGCTTGATAGCCAGAACTGGATTACCTGCGGCAATGCCCTGCGGTTGGATTGGCTGAGCATCTGCCCACCAACCG
GAACTGCCGTAAAACTGCAGGCGAACGACCTGTTTGAGATGCCGCTCGATCAGGCGGAGATCGACTTCGAGAATGAAGGT
GGGGAGACGTATATCTGCGGTAATCCCCCTTATCTCGGGGCGAAGAAGAAGAGCTCGGATCAAATAGAGGATATGAAGCG
AGTCGGGTTGGATAAAGCCCAACTTCTGGACTACGTATCCGCTTTTATTGTTCGGGGATTGCCATTAGTTGCGCAACAAA
GATGCGACATGGCTCTGGTTTCGACCAGTTCAATATGTCAGGGAGAGCAAGTCTCGCTCATATGGCCGCGCATATTAAAA
TCCGCGAACGTCAAGTTCGCTTACCGACCATTCCGATGGAGTAATTCCGCGGCGAACAACGCTGGTGTCTATTGCACGAT
AATTGGCCTTACTGGATCTGAGGTATCGAATAAAAAGCTCTTTGGAGAAGGAAGTGTCGTAGAATGTTCGTCGATCGCGC
CCTACCTCGTGCCGGGACCAGAGATCATTTGCGCTCCAAGGCAATCGTCGATCTCAGGCTTCGCCCGTATGGTAATGGGG
AGCAACCCTGTAGATGGAAAGCGCTTGATTTTCGAGCAAGATGAAAAAGAAAGCGTTGTTGCAGCCGACCCTCGGTCAGA
ACGCTTCTTTAAGCGTTATGGGGGTACTCAAGAATTAGTTAATGGCGTGGATCGATGGTGTTTGTGGATTAACGATGATC
AAGTTGATGACGCAAAAGCCATTGCAGAAATAGCGAAGGTGCTTGAAAGCTGTCGTTCATATAGGCAAGGCGCTGGCCGC
GATGCTCAAAAAGCAGCAAATCGTCCCCACTCGTTTTGCTACAGAACGTTTCAGGAAAATATTGGTATCCATGTTGGCCT
AACGATTGGTAACGGCCTCAGCCATGTTCCCGCTGATCTTAAGAGTAGCGGCTTTGTTTCTAGCCATACTGCATACATGA
TTTATGGTTGGCATCCGGTTGAGTTCGCGTTGTTGAACTCGCGGCTGATGTTGGTTTGGACTGAAACGGTTGGTGGCAGA
CTGGGTAATGGAATGCGCTTCAGCAACACGATCGTTTATAATACATTCCCGGTCCCTTCCCTCACTGACCAGAACAAGGC
CGACCTCACCCGCTGCGCGGAGGACATCCTCCTCGCCCGAGAGTCGCATTTCCCGGCTACGATTGCGGACCTCTATGATC
CCGAGACCATGCCCGAAAGCCTGCGCGCCGCGCACGATCGCAACGACGAAGTCCTCGAACGCATCTACATCGGCCGCCGC
TTCCGCAACGACACCGAACGCCTCGAAAAGCTATTCGAACTCTACACCAAAATGACTGGCGGACGATCCTCAGAAGGTGG
AGCGGCATGA

Upstream 100 bases:

>100_bases
GGTTGCGCACCGACACGCGCGACAGCTGGAACGAAACTGACATTCTCGCGCGCGGCGAAGAACTCTTCCATTTTGCCCTT
AAAATCTGGCCTCGCCCCGC

Downstream 100 bases:

>100_bases
CCGAGGTGACGAAAGCGGCTGAAGCGCGCGCGGCATCGGCAAGGTCGAAGACCCTTCTGAAGGTCGCGGTGCTGGTGTTC
GCAATAGAGTTGGCTGCGTG

Product: type II restriction enzyme, methylase subunit

Products: NA

Alternate protein names: Modification methylase BsuMORF677P; M.BsuMORF677P [H]

Number of amino acids: Translated: 909; Mature: 909

Protein sequence:

>909_residues
MNPVEIEEAVSDLARAPYDASEFPFQFLAAFGNKQTTLQRLRAGNSNQSDLPGAVLQRNHIHIATCDAGNVDRTLAALRK
SPKTASQKARFILATDGVAFQAEDMASGETVACNYAAFPDKFAFFLPLAGITTVQQIRESSFDIKATGRLNKLYVELLKD
NPDWASRSEDMNHFMARLIFCFFAEDTDIFVGEGLFSRTVETMSARDASDTHMVIAEIFRAMDTRLADRAAAGIKSWADV
FPYVNGQLFSGSTECPRFSKIARSYLLHIGSLDWQKINPDIFGSMIQAVADDEERGALGMHYTSVPNILKVLNPLFLDDL
RAKLEEAGDNSRKLLNLRNRMAKIRVFDPACGSGNFLVIAYKQMRELEAEINRRRGEADRRSDIPLTNFRGIELRNFPAE
IARLALIIAEYQCDVLYRGQKEALAEFLPLDSQNWITCGNALRLDWLSICPPTGTAVKLQANDLFEMPLDQAEIDFENEG
GETYICGNPPYLGAKKKSSDQIEDMKRVGLDKAQLLDYVSAFIVRGLPLVAQQRCDMALVSTSSICQGEQVSLIWPRILK
SANVKFAYRPFRWSNSAANNAGVYCTIIGLTGSEVSNKKLFGEGSVVECSSIAPYLVPGPEIICAPRQSSISGFARMVMG
SNPVDGKRLIFEQDEKESVVAADPRSERFFKRYGGTQELVNGVDRWCLWINDDQVDDAKAIAEIAKVLESCRSYRQGAGR
DAQKAANRPHSFCYRTFQENIGIHVGLTIGNGLSHVPADLKSSGFVSSHTAYMIYGWHPVEFALLNSRLMLVWTETVGGR
LGNGMRFSNTIVYNTFPVPSLTDQNKADLTRCAEDILLARESHFPATIADLYDPETMPESLRAAHDRNDEVLERIYIGRR
FRNDTERLEKLFELYTKMTGGRSSEGGAA

Sequences:

>Translated_909_residues
MNPVEIEEAVSDLARAPYDASEFPFQFLAAFGNKQTTLQRLRAGNSNQSDLPGAVLQRNHIHIATCDAGNVDRTLAALRK
SPKTASQKARFILATDGVAFQAEDMASGETVACNYAAFPDKFAFFLPLAGITTVQQIRESSFDIKATGRLNKLYVELLKD
NPDWASRSEDMNHFMARLIFCFFAEDTDIFVGEGLFSRTVETMSARDASDTHMVIAEIFRAMDTRLADRAAAGIKSWADV
FPYVNGQLFSGSTECPRFSKIARSYLLHIGSLDWQKINPDIFGSMIQAVADDEERGALGMHYTSVPNILKVLNPLFLDDL
RAKLEEAGDNSRKLLNLRNRMAKIRVFDPACGSGNFLVIAYKQMRELEAEINRRRGEADRRSDIPLTNFRGIELRNFPAE
IARLALIIAEYQCDVLYRGQKEALAEFLPLDSQNWITCGNALRLDWLSICPPTGTAVKLQANDLFEMPLDQAEIDFENEG
GETYICGNPPYLGAKKKSSDQIEDMKRVGLDKAQLLDYVSAFIVRGLPLVAQQRCDMALVSTSSICQGEQVSLIWPRILK
SANVKFAYRPFRWSNSAANNAGVYCTIIGLTGSEVSNKKLFGEGSVVECSSIAPYLVPGPEIICAPRQSSISGFARMVMG
SNPVDGKRLIFEQDEKESVVAADPRSERFFKRYGGTQELVNGVDRWCLWINDDQVDDAKAIAEIAKVLESCRSYRQGAGR
DAQKAANRPHSFCYRTFQENIGIHVGLTIGNGLSHVPADLKSSGFVSSHTAYMIYGWHPVEFALLNSRLMLVWTETVGGR
LGNGMRFSNTIVYNTFPVPSLTDQNKADLTRCAEDILLARESHFPATIADLYDPETMPESLRAAHDRNDEVLERIYIGRR
FRNDTERLEKLFELYTKMTGGRSSEGGAA
>Mature_909_residues
MNPVEIEEAVSDLARAPYDASEFPFQFLAAFGNKQTTLQRLRAGNSNQSDLPGAVLQRNHIHIATCDAGNVDRTLAALRK
SPKTASQKARFILATDGVAFQAEDMASGETVACNYAAFPDKFAFFLPLAGITTVQQIRESSFDIKATGRLNKLYVELLKD
NPDWASRSEDMNHFMARLIFCFFAEDTDIFVGEGLFSRTVETMSARDASDTHMVIAEIFRAMDTRLADRAAAGIKSWADV
FPYVNGQLFSGSTECPRFSKIARSYLLHIGSLDWQKINPDIFGSMIQAVADDEERGALGMHYTSVPNILKVLNPLFLDDL
RAKLEEAGDNSRKLLNLRNRMAKIRVFDPACGSGNFLVIAYKQMRELEAEINRRRGEADRRSDIPLTNFRGIELRNFPAE
IARLALIIAEYQCDVLYRGQKEALAEFLPLDSQNWITCGNALRLDWLSICPPTGTAVKLQANDLFEMPLDQAEIDFENEG
GETYICGNPPYLGAKKKSSDQIEDMKRVGLDKAQLLDYVSAFIVRGLPLVAQQRCDMALVSTSSICQGEQVSLIWPRILK
SANVKFAYRPFRWSNSAANNAGVYCTIIGLTGSEVSNKKLFGEGSVVECSSIAPYLVPGPEIICAPRQSSISGFARMVMG
SNPVDGKRLIFEQDEKESVVAADPRSERFFKRYGGTQELVNGVDRWCLWINDDQVDDAKAIAEIAKVLESCRSYRQGAGR
DAQKAANRPHSFCYRTFQENIGIHVGLTIGNGLSHVPADLKSSGFVSSHTAYMIYGWHPVEFALLNSRLMLVWTETVGGR
LGNGMRFSNTIVYNTFPVPSLTDQNKADLTRCAEDILLARESHFPATIADLYDPETMPESLRAAHDRNDEVLERIYIGRR
FRNDTERLEKLFELYTKMTGGRSSEGGAA

Specific function: Unknown

COG id: COG1002

COG function: function code V; Type II restriction enzyme, methylase subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 101215; Mature: 101215

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPVEIEEAVSDLARAPYDASEFPFQFLAAFGNKQTTLQRLRAGNSNQSDLPGAVLQRNH
CCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHCCCC
IHIATCDAGNVDRTLAALRKSPKTASQKARFILATDGVAFQAEDMASGETVACNYAAFPD
EEEEECCCCCHHHHHHHHHCCCCCHHHCCEEEEEECCCEEEECCCCCCCEEEEEECCCCC
KFAFFLPLAGITTVQQIRESSFDIKATGRLNKLYVELLKDNPDWASRSEDMNHFMARLIF
HHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
CFFAEDTDIFVGEGLFSRTVETMSARDASDTHMVIAEIFRAMDTRLADRAAAGIKSWADV
HHHCCCCCEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPYVNGQLFSGSTECPRFSKIARSYLLHIGSLDWQKINPDIFGSMIQAVADDEERGALGM
CCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCE
HYTSVPNILKVLNPLFLDDLRAKLEEAGDNSRKLLNLRNRMAKIRVFDPACGSGNFLVIA
EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEECCCCCCCCEEEEE
YKQMRELEAEINRRRGEADRRSDIPLTNFRGIELRNFPAEIARLALIIAEYQCDVLYRGQ
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCEEECCC
KEALAEFLPLDSQNWITCGNALRLDWLSICPPTGTAVKLQANDLFEMPLDQAEIDFENEG
HHHHHHHCCCCCCCCEEECCEEEECHHEECCCCCCEEEEECCCHHHCCCCCCCCCEECCC
GETYICGNPPYLGAKKKSSDQIEDMKRVGLDKAQLLDYVSAFIVRGLPLVAQQRCDMALV
CCEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHCCEEEE
STSSICQGEQVSLIWPRILKSANVKFAYRPFRWSNSAANNAGVYCTIIGLTGSEVSNKKL
ECHHHCCCCCEEEEHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCEE
FGEGSVVECSSIAPYLVPGPEIICAPRQSSISGFARMVMGSNPVDGKRLIFEQDEKESVV
ECCCCEEECCCCCCEECCCCCEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEE
AADPRSERFFKRYGGTQELVNGVDRWCLWINDDQVDDAKAIAEIAKVLESCRSYRQGAGR
ECCCHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
DAQKAANRPHSFCYRTFQENIGIHVGLTIGNGLSHVPADLKSSGFVSSHTAYMIYGWHPV
CHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEECCCEEEEEECCHH
EFALLNSRLMLVWTETVGGRLGNGMRFSNTIVYNTFPVPSLTDQNKADLTRCAEDILLAR
EEHEECCCEEEEEECHHCCCCCCCEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
ESHFPATIADLYDPETMPESLRAAHDRNDEVLERIYIGRRFRNDTERLEKLFELYTKMTG
CCCCCCHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
GRSSEGGAA
CCCCCCCCC
>Mature Secondary Structure
MNPVEIEEAVSDLARAPYDASEFPFQFLAAFGNKQTTLQRLRAGNSNQSDLPGAVLQRNH
CCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHCCCC
IHIATCDAGNVDRTLAALRKSPKTASQKARFILATDGVAFQAEDMASGETVACNYAAFPD
EEEEECCCCCHHHHHHHHHCCCCCHHHCCEEEEEECCCEEEECCCCCCCEEEEEECCCCC
KFAFFLPLAGITTVQQIRESSFDIKATGRLNKLYVELLKDNPDWASRSEDMNHFMARLIF
HHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
CFFAEDTDIFVGEGLFSRTVETMSARDASDTHMVIAEIFRAMDTRLADRAAAGIKSWADV
HHHCCCCCEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPYVNGQLFSGSTECPRFSKIARSYLLHIGSLDWQKINPDIFGSMIQAVADDEERGALGM
CCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCE
HYTSVPNILKVLNPLFLDDLRAKLEEAGDNSRKLLNLRNRMAKIRVFDPACGSGNFLVIA
EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEECCCCCCCCEEEEE
YKQMRELEAEINRRRGEADRRSDIPLTNFRGIELRNFPAEIARLALIIAEYQCDVLYRGQ
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCEEECCC
KEALAEFLPLDSQNWITCGNALRLDWLSICPPTGTAVKLQANDLFEMPLDQAEIDFENEG
HHHHHHHCCCCCCCCEEECCEEEECHHEECCCCCCEEEEECCCHHHCCCCCCCCCEECCC
GETYICGNPPYLGAKKKSSDQIEDMKRVGLDKAQLLDYVSAFIVRGLPLVAQQRCDMALV
CCEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHCCEEEE
STSSICQGEQVSLIWPRILKSANVKFAYRPFRWSNSAANNAGVYCTIIGLTGSEVSNKKL
ECHHHCCCCCEEEEHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCEE
FGEGSVVECSSIAPYLVPGPEIICAPRQSSISGFARMVMGSNPVDGKRLIFEQDEKESVV
ECCCCEEECCCCCCEECCCCCEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEE
AADPRSERFFKRYGGTQELVNGVDRWCLWINDDQVDDAKAIAEIAKVLESCRSYRQGAGR
ECCCHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
DAQKAANRPHSFCYRTFQENIGIHVGLTIGNGLSHVPADLKSSGFVSSHTAYMIYGWHPV
CHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEECCCEEEEEECCHH
EFALLNSRLMLVWTETVGGRLGNGMRFSNTIVYNTFPVPSLTDQNKADLTRCAEDILLAR
EEHEECCCEEEEEECHHCCCCCCCEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
ESHFPATIADLYDPETMPESLRAAHDRNDEVLERIYIGRRFRNDTERLEKLFELYTKMTG
CCCCCCHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
GRSSEGGAA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]