| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751698
Identifier: 86751698
GI number: 86751698
Start: 5194441
End: 5194884
Strand: Reverse
Name: 86751698
Synonym: RPB_4600
Alternate gene names: NA
Gene position: 5194884-5194441 (Counterclockwise)
Preceding gene: 86751699
Following gene: 86751697
Centisome position: 97.43
GC content: 66.22
Gene sequence:
>444_bases ATGACCAATGCTGCGCAGACCACGACCGATGCACTCTCCCGCGTCCTCGGCCGGACCTTCGGCCTCTATGTGCAAACCCA CGGCTATCACTGGAATGTCGTCGGGCCGGAATTCCGCCGCCTGCACGCCGCGTTCGAAGAGCAATACAACGACCTCTGGA ACGCGCTCGACGACATCGCGGAACGAATCCGCAGTCTCGGCGCTCATGCACCCGGCTCGCTGGCCGAACTGACCGGACTG GCGGGCGCGTCGCCGGCGCCGGCGCAATCTGCCGAAGCCATGGTCGGCGCGTTGATGGCGGGCCACGAGGCGCTGATCGA GGAACTGCGCCGCGCAATCGCCTCGGCGCAGCAGGATGGGGACGAGCCGACGGTGGGATTGTTGAGTGATCGCACGGCCT GGCATCAGAAGCAGCTCTGGATGATGAAGGCAGCCCGCGCCTGA
Upstream 100 bases:
>100_bases TACTACTCGACCCGCGCTCTCTGAGGCTGCGCGCAAGCTCCGGCGCGCGCCGGAGCTCTTCCTTCAACTCATTCGTCTGA TCATCACGGAGGATCAAGCC
Downstream 100 bases:
>100_bases CGATTGCTGCGGCGTCTTCCGAAGGGGGCGCCGCGGTTTACCGATGCAGAGGAGGACCGACCGATGACCAAGCCGATCGT GAAGCCGTTCTGGGACGAGG
Product: Ferritin and Dps
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MTNAAQTTTDALSRVLGRTFGLYVQTHGYHWNVVGPEFRRLHAAFEEQYNDLWNALDDIAERIRSLGAHAPGSLAELTGL AGASPAPAQSAEAMVGALMAGHEALIEELRRAIASAQQDGDEPTVGLLSDRTAWHQKQLWMMKAARA
Sequences:
>Translated_147_residues MTNAAQTTTDALSRVLGRTFGLYVQTHGYHWNVVGPEFRRLHAAFEEQYNDLWNALDDIAERIRSLGAHAPGSLAELTGL AGASPAPAQSAEAMVGALMAGHEALIEELRRAIASAQQDGDEPTVGLLSDRTAWHQKQLWMMKAARA >Mature_146_residues TNAAQTTTDALSRVLGRTFGLYVQTHGYHWNVVGPEFRRLHAAFEEQYNDLWNALDDIAERIRSLGAHAPGSLAELTGLA GASPAPAQSAEAMVGALMAGHEALIEELRRAIASAQQDGDEPTVGLLSDRTAWHQKQLWMMKAARA
Specific function: Unknown
COG id: COG0783
COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dps family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002177 - InterPro: IPR023188 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 15965; Mature: 15834
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS00818 DPS_1 ; PS00819 DPS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNAAQTTTDALSRVLGRTFGLYVQTHGYHWNVVGPEFRRLHAAFEEQYNDLWNALDDIA CCCCHHHHHHHHHHHHHHHHHHEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH ERIRSLGAHAPGSLAELTGLAGASPAPAQSAEAMVGALMAGHEALIEELRRAIASAQQDG HHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DEPTVGLLSDRTAWHQKQLWMMKAARA CCCCCCHHHCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TNAAQTTTDALSRVLGRTFGLYVQTHGYHWNVVGPEFRRLHAAFEEQYNDLWNALDDIA CCCHHHHHHHHHHHHHHHHHHEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH ERIRSLGAHAPGSLAELTGLAGASPAPAQSAEAMVGALMAGHEALIEELRRAIASAQQDG HHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DEPTVGLLSDRTAWHQKQLWMMKAARA CCCCCCHHHCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]