Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86751698

Identifier: 86751698

GI number: 86751698

Start: 5194441

End: 5194884

Strand: Reverse

Name: 86751698

Synonym: RPB_4600

Alternate gene names: NA

Gene position: 5194884-5194441 (Counterclockwise)

Preceding gene: 86751699

Following gene: 86751697

Centisome position: 97.43

GC content: 66.22

Gene sequence:

>444_bases
ATGACCAATGCTGCGCAGACCACGACCGATGCACTCTCCCGCGTCCTCGGCCGGACCTTCGGCCTCTATGTGCAAACCCA
CGGCTATCACTGGAATGTCGTCGGGCCGGAATTCCGCCGCCTGCACGCCGCGTTCGAAGAGCAATACAACGACCTCTGGA
ACGCGCTCGACGACATCGCGGAACGAATCCGCAGTCTCGGCGCTCATGCACCCGGCTCGCTGGCCGAACTGACCGGACTG
GCGGGCGCGTCGCCGGCGCCGGCGCAATCTGCCGAAGCCATGGTCGGCGCGTTGATGGCGGGCCACGAGGCGCTGATCGA
GGAACTGCGCCGCGCAATCGCCTCGGCGCAGCAGGATGGGGACGAGCCGACGGTGGGATTGTTGAGTGATCGCACGGCCT
GGCATCAGAAGCAGCTCTGGATGATGAAGGCAGCCCGCGCCTGA

Upstream 100 bases:

>100_bases
TACTACTCGACCCGCGCTCTCTGAGGCTGCGCGCAAGCTCCGGCGCGCGCCGGAGCTCTTCCTTCAACTCATTCGTCTGA
TCATCACGGAGGATCAAGCC

Downstream 100 bases:

>100_bases
CGATTGCTGCGGCGTCTTCCGAAGGGGGCGCCGCGGTTTACCGATGCAGAGGAGGACCGACCGATGACCAAGCCGATCGT
GAAGCCGTTCTGGGACGAGG

Product: Ferritin and Dps

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MTNAAQTTTDALSRVLGRTFGLYVQTHGYHWNVVGPEFRRLHAAFEEQYNDLWNALDDIAERIRSLGAHAPGSLAELTGL
AGASPAPAQSAEAMVGALMAGHEALIEELRRAIASAQQDGDEPTVGLLSDRTAWHQKQLWMMKAARA

Sequences:

>Translated_147_residues
MTNAAQTTTDALSRVLGRTFGLYVQTHGYHWNVVGPEFRRLHAAFEEQYNDLWNALDDIAERIRSLGAHAPGSLAELTGL
AGASPAPAQSAEAMVGALMAGHEALIEELRRAIASAQQDGDEPTVGLLSDRTAWHQKQLWMMKAARA
>Mature_146_residues
TNAAQTTTDALSRVLGRTFGLYVQTHGYHWNVVGPEFRRLHAAFEEQYNDLWNALDDIAERIRSLGAHAPGSLAELTGLA
GASPAPAQSAEAMVGALMAGHEALIEELRRAIASAQQDGDEPTVGLLSDRTAWHQKQLWMMKAARA

Specific function: Unknown

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002177
- InterPro:   IPR023188
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 15965; Mature: 15834

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS00818 DPS_1 ; PS00819 DPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNAAQTTTDALSRVLGRTFGLYVQTHGYHWNVVGPEFRRLHAAFEEQYNDLWNALDDIA
CCCCHHHHHHHHHHHHHHHHHHEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
ERIRSLGAHAPGSLAELTGLAGASPAPAQSAEAMVGALMAGHEALIEELRRAIASAQQDG
HHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DEPTVGLLSDRTAWHQKQLWMMKAARA
CCCCCCHHHCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNAAQTTTDALSRVLGRTFGLYVQTHGYHWNVVGPEFRRLHAAFEEQYNDLWNALDDIA
CCCHHHHHHHHHHHHHHHHHHEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
ERIRSLGAHAPGSLAELTGLAGASPAPAQSAEAMVGALMAGHEALIEELRRAIASAQQDG
HHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DEPTVGLLSDRTAWHQKQLWMMKAARA
CCCCCCHHHCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]