| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is blh [H]
Identifier: 86751697
GI number: 86751697
Start: 5193505
End: 5194377
Strand: Reverse
Name: blh [H]
Synonym: RPB_4599
Alternate gene names: 86751697
Gene position: 5194377-5193505 (Counterclockwise)
Preceding gene: 86751698
Following gene: 86751696
Centisome position: 97.43
GC content: 64.6
Gene sequence:
>873_bases ATGACCAAGCCGATCGTGAAGCCGTTCTGGGACGAGGCGACTGGAAGCTGGCAATACGTATTTCATGATCCGCAGACGAT GCGGGGCGCGGTGGTCGATCCGGTGTGGAACTACGACCCGAAAGCCGGTGCCACATTCACCCGCAGTGTCGACGAGATCG TCGCCTATGTGCGGGAGGCCGGAATCGACGTCGTCTGGATCCTCGACACGCATCCGCATGCCGATCATTTCTCGGCGGCG CCGCTCCTGTCCGAACGGCTGAAGGCGCCGACCGGGATCGGCGAGCGCGTCACCGAGGTGCAGAAGCTGTGGCAGAAGAT CTATCATCTGCCGGAGTCGTTTCCGACCGACGGCCGCCAATGGGACCGGCTGTTCGCCGACGGCGACATCTTCATGGTCG GCGACATTCCGGTGCGGGTGATGTTTTCGCCTGGACACACATTGGCGTCGGTCACCTATGTGGCCGGCGATGCCGCCTTC GTCCATGATACGCTGATGATGCCGGACAGCGGCACCAGCCGCGCCGATTTTCCCGGCGGCTCGTCGAAGCAGCTGTATGC CAGCCTGCAGCGGATCCTGTCGCTCCCCGACGACACCCGGCTTTACGTCGGCCACGACTATGCGCCCGAGGGGCGCGACG CGCAGTGCATGGCGACGGTCGCCGAACACAAGGCGCGCAACATCCATCTTGCCGGCGGTCGCAGCGAAGCCGAGTTCTGC GCCGCCCGCGACCGGCGCGACGCGTCTCTGCCGCTGCCGAAACTGATGCTCGCAGCGCTGCAAATCAACATCCGCGGCGG CCGCAAGCCGGAGCCGGAAGCCGACGGGCGCTCTTATTTGAAGATTCCGCTGGACTATTTCGAGCCGCGTTGA
Upstream 100 bases:
>100_bases GAAGCAGCTCTGGATGATGAAGGCAGCCCGCGCCTGACGATTGCTGCGGCGTCTTCCGAAGGGGGCGCCGCGGTTTACCG ATGCAGAGGAGGACCGACCG
Downstream 100 bases:
>100_bases TCGCCCGGATTGCGGAAGGCGCCGGTCGTTGCATCGGCGTCTTCCGGGCCGCGGCGCGGCTCCCCGGCGGTCGCCGATCC GGATTCCGATCCGCTCCGTC
Product: Beta-lactamase-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTKPIVKPFWDEATGSWQYVFHDPQTMRGAVVDPVWNYDPKAGATFTRSVDEIVAYVREAGIDVVWILDTHPHADHFSAA PLLSERLKAPTGIGERVTEVQKLWQKIYHLPESFPTDGRQWDRLFADGDIFMVGDIPVRVMFSPGHTLASVTYVAGDAAF VHDTLMMPDSGTSRADFPGGSSKQLYASLQRILSLPDDTRLYVGHDYAPEGRDAQCMATVAEHKARNIHLAGGRSEAEFC AARDRRDASLPLPKLMLAALQINIRGGRKPEPEADGRSYLKIPLDYFEPR
Sequences:
>Translated_290_residues MTKPIVKPFWDEATGSWQYVFHDPQTMRGAVVDPVWNYDPKAGATFTRSVDEIVAYVREAGIDVVWILDTHPHADHFSAA PLLSERLKAPTGIGERVTEVQKLWQKIYHLPESFPTDGRQWDRLFADGDIFMVGDIPVRVMFSPGHTLASVTYVAGDAAF VHDTLMMPDSGTSRADFPGGSSKQLYASLQRILSLPDDTRLYVGHDYAPEGRDAQCMATVAEHKARNIHLAGGRSEAEFC AARDRRDASLPLPKLMLAALQINIRGGRKPEPEADGRSYLKIPLDYFEPR >Mature_289_residues TKPIVKPFWDEATGSWQYVFHDPQTMRGAVVDPVWNYDPKAGATFTRSVDEIVAYVREAGIDVVWILDTHPHADHFSAAP LLSERLKAPTGIGERVTEVQKLWQKIYHLPESFPTDGRQWDRLFADGDIFMVGDIPVRVMFSPGHTLASVTYVAGDAAFV HDTLMMPDSGTSRADFPGGSSKQLYASLQRILSLPDDTRLYVGHDYAPEGRDAQCMATVAEHKARNIHLAGGRSEAEFCA ARDRRDASLPLPKLMLAALQINIRGGRKPEPEADGRSYLKIPLDYFEPR
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=266, Percent_Identity=26.3157894736842, Blast_Score=90, Evalue=2e-18, Organism=Escherichia coli, GI1787158, Length=186, Percent_Identity=28.494623655914, Blast_Score=68, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17538952, Length=268, Percent_Identity=25.3731343283582, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI221330176, Length=264, Percent_Identity=25, Blast_Score=79, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 32351; Mature: 32220
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPIVKPFWDEATGSWQYVFHDPQTMRGAVVDPVWNYDPKAGATFTRSVDEIVAYVREA CCCCCCCCCCCCCCCCEEEEEECCCHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHC GIDVVWILDTHPHADHFSAAPLLSERLKAPTGIGERVTEVQKLWQKIYHLPESFPTDGRQ CCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH WDRLFADGDIFMVGDIPVRVMFSPGHTLASVTYVAGDAAFVHDTLMMPDSGTSRADFPGG HHHEECCCCEEEECCCCEEEEECCCCCEEEEEEECCCHHHHHHEEECCCCCCCCCCCCCC SSKQLYASLQRILSLPDDTRLYVGHDYAPEGRDAQCMATVAEHKARNIHLAGGRSEAEFC CCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHH AARDRRDASLPLPKLMLAALQINIRGGRKPEPEADGRSYLKIPLDYFEPR HHCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEEHHHCCCC >Mature Secondary Structure TKPIVKPFWDEATGSWQYVFHDPQTMRGAVVDPVWNYDPKAGATFTRSVDEIVAYVREA CCCCCCCCCCCCCCCEEEEEECCCHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHC GIDVVWILDTHPHADHFSAAPLLSERLKAPTGIGERVTEVQKLWQKIYHLPESFPTDGRQ CCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH WDRLFADGDIFMVGDIPVRVMFSPGHTLASVTYVAGDAAFVHDTLMMPDSGTSRADFPGG HHHEECCCCEEEECCCCEEEEECCCCCEEEEEEECCCHHHHHHEEECCCCCCCCCCCCCC SSKQLYASLQRILSLPDDTRLYVGHDYAPEGRDAQCMATVAEHKARNIHLAGGRSEAEFC CCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHH AARDRRDASLPLPKLMLAALQINIRGGRKPEPEADGRSYLKIPLDYFEPR HHCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEEHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]