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The map label for this gene is 86751642

Identifier: 86751642

GI number: 86751642

Start: 5138691

End: 5139344

Strand: Reverse

Name: 86751642

Synonym: RPB_4544

Alternate gene names: NA

Gene position: 5139344-5138691 (Counterclockwise)

Preceding gene: 86751643

Following gene: 86751641

Centisome position: 96.39

GC content: 64.68

Gene sequence:

>654_bases
ATGCTCGGCTTGCTTCGCCTAGCCGTCATTCGAACCGCGCTCGCGGCCGCGCTGACGCTGTCGGCAGGCGTCGCCGCGGC
CCACGCCCATCCGCACGTCTGGATCACCGCGACCAGCGAGCTGGTCTACGGGCCCGACGGCGCGCTGACCGGCGTGCGCC
ATTCCTGGGCGTTCGACGACATGTTCTCGACCTACGCGCTGCAGGGGATCGAGACCAAGCAGAAGGGCGTCTACACCCGC
GAGGAGCTGGCGCCGCTGGCCCAGACCAATGTCGAGTCGCTGAAGGAGTTCGCGTTCTTCACCTTCGCCAAGGCCGAGGG
CAAGAAGCAGAAGTTCAACGATCCGGTCGACTACTATCTCGACCACAACAACGGCGTGCTGACGCTGCACTTCTTCCTGC
CGCTGAAGGCGCCGGTGAAGAGCCGGGAGCTCGCGGTCGAAGTGTTCGATCCGAGCTACTTCATCGACTTCACCTTCGCC
GACAAGGACCCGGTCAAGCTCGCCGGCGCGCCGGCCGGCTGCGCGTTCAAATTCGAGCGGCCCAATGACGGCACGGCGAC
CGCGCAGCGGATGTCGGAAGACAATTTTCTGAGCGGCGACAACTCCAACTACGGCGCGATGTTCGCCAACAAGATCGAGG
TCAAGTGCCCGTGA

Upstream 100 bases:

>100_bases
CCGGAGGAGGCCTATATCGCCTTCCGCGGCCGTGCGCCGGAGCCCGACGCGCTGCTGCGCCGGCGCGGCCTGCTCGAAAC
CCCGGAGGCGGCGTAGCGCC

Downstream 100 bases:

>100_bases
TGCCGTTGCGCGCGATGAAGTCTCGCACATGCCTGGCGTTCGGCCTGCTCGCCGTCGCCGCACTGCTCACACTGGGTGAC
GCCACGCTGCACAGCGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MLGLLRLAVIRTALAAALTLSAGVAAAHAHPHVWITATSELVYGPDGALTGVRHSWAFDDMFSTYALQGIETKQKGVYTR
EELAPLAQTNVESLKEFAFFTFAKAEGKKQKFNDPVDYYLDHNNGVLTLHFFLPLKAPVKSRELAVEVFDPSYFIDFTFA
DKDPVKLAGAPAGCAFKFERPNDGTATAQRMSEDNFLSGDNSNYGAMFANKIEVKCP

Sequences:

>Translated_217_residues
MLGLLRLAVIRTALAAALTLSAGVAAAHAHPHVWITATSELVYGPDGALTGVRHSWAFDDMFSTYALQGIETKQKGVYTR
EELAPLAQTNVESLKEFAFFTFAKAEGKKQKFNDPVDYYLDHNNGVLTLHFFLPLKAPVKSRELAVEVFDPSYFIDFTFA
DKDPVKLAGAPAGCAFKFERPNDGTATAQRMSEDNFLSGDNSNYGAMFANKIEVKCP
>Mature_217_residues
MLGLLRLAVIRTALAAALTLSAGVAAAHAHPHVWITATSELVYGPDGALTGVRHSWAFDDMFSTYALQGIETKQKGVYTR
EELAPLAQTNVESLKEFAFFTFAKAEGKKQKFNDPVDYYLDHNNGVLTLHFFLPLKAPVKSRELAVEVFDPSYFIDFTFA
DKDPVKLAGAPAGCAFKFERPNDGTATAQRMSEDNFLSGDNSNYGAMFANKIEVKCP

Specific function: Unknown

COG id: COG3683

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010412
- InterPro:   IPR016537 [H]

Pfam domain/function: PF06226 DUF1007 [H]

EC number: NA

Molecular weight: Translated: 23805; Mature: 23805

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGLLRLAVIRTALAAALTLSAGVAAAHAHPHVWITATSELVYGPDGALTGVRHSWAFDD
CCHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECEEEECCCCCCCCCCCCCCHHH
MFSTYALQGIETKQKGVYTREELAPLAQTNVESLKEFAFFTFAKAEGKKQKFNDPVDYYL
HHHHHHHCCCCHHHCCCCCHHHHHHHHHCCHHHHHHHHHHEEECCCCCHHCCCCCCCEEE
DHNNGVLTLHFFLPLKAPVKSRELAVEVFDPSYFIDFTFADKDPVKLAGAPAGCAFKFER
ECCCCEEEEEEEEECCCCCCCCEEEEEEECCCEEEEEEECCCCCEEEECCCCCCEEEEEC
PNDGTATAQRMSEDNFLSGDNSNYGAMFANKIEVKCP
CCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MLGLLRLAVIRTALAAALTLSAGVAAAHAHPHVWITATSELVYGPDGALTGVRHSWAFDD
CCHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECEEEECCCCCCCCCCCCCCHHH
MFSTYALQGIETKQKGVYTREELAPLAQTNVESLKEFAFFTFAKAEGKKQKFNDPVDYYL
HHHHHHHCCCCHHHCCCCCHHHHHHHHHCCHHHHHHHHHHEEECCCCCHHCCCCCCCEEE
DHNNGVLTLHFFLPLKAPVKSRELAVEVFDPSYFIDFTFADKDPVKLAGAPAGCAFKFER
ECCCCEEEEEEEEECCCCCCCCEEEEEEECCCEEEEEEECCCCCEEEECCCCCCEEEEEC
PNDGTATAQRMSEDNFLSGDNSNYGAMFANKIEVKCP
CCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]