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The map label for this gene is 86751641

Identifier: 86751641

GI number: 86751641

Start: 5137495

End: 5138691

Strand: Reverse

Name: 86751641

Synonym: RPB_4543

Alternate gene names: NA

Gene position: 5138691-5137495 (Counterclockwise)

Preceding gene: 86751642

Following gene: 86751640

Centisome position: 96.38

GC content: 69.26

Gene sequence:

>1197_bases
ATGCCGTTGCGCGCGATGAAGTCTCGCACATGCCTGGCGTTCGGCCTGCTCGCCGTCGCCGCACTGCTCACACTGGGTGA
CGCCACGCTGCACAGCGCGCTGGCGCAGAATCCGTTCGGCGCGCCGAAGGCCGCCGCCGAGCCGCAGGCCGGCGGGATCA
TCGGCTGGCTGCTGGCGCAGCAATCGGCGTTCTATCGGCAGATGTCGGCGACGATTCGCGCCGCCAAGGCGGACGGCAGC
GCGGTCTGGACGCTGCTCGGCATTTCGTTCGCCTACGGCATCTTCCATGCCGCCGGCCCCGGCCACGGCAAGGCGGTGAT
CTCGTCCTACATGATCGCCAATGAAGAGACCGCGCGGCGCGGCATCGTGCTGTCGTTCGTCTCGGCGCTGATGCAGGCGC
TGGTCGCGGTGCTGATCGTCGGGATCTGCGCCTGGCTGCTCAACGCCACGGCGAAGACGATGTGCAGCGCCGAACGGGCG
ATCGAGATCGGCAGCTACGCCCTGATCGCCCTGTTCGGCGCGCGGCTGGTGTGGAGCAAGGGCGGCGGGTTCTTTCGCGC
GCTGCAGGGCAGCATGCGCAAGCCGGGCCTGGCGCTGGCCGGCGTCCCGGCAATGGCCCCCGCCGGCGCGGCGTCCCATG
ATCACGATCACGCGCACGGCCACAGCCATTCGCATCCGCTGCAGGCCCATGCCGGCCACGACCATCACGATCACGGCCAT
AGTCATGGCCACGATCATGCTCACGCGCACGATCATCATGGTCATGATCACGCCCATGACCATGCGCATGCCCACGACGA
ATCCTGCGACCATTGCGGCCATTCGCATGGTCCGACGCCCGCGGAACTCGCCGGCCCGGGCGGCTGGCAGCGCGGCCTCG
GTGCGGTGCTGACGGTCGGCATCCGGCCGTGCTCGGGCGCGATCCTGGTGCTGGTGTTCGCGCTGGCGCAGGGCATGTTC
TGGGCCGGGATCGCCGCGACCTTCGTGATGGGGCTCGGCACCGCCATCACCGTGGCGACCATCGCCACGATCGCGGTATC
CGCCAAAGGCGTGGCGCGGCGGCTTGCCGCGGGTCACGCCGGCGCCGGAGCGCTGGTCATGCGTGGCGTCGAATTCGGCG
CAGCCGGGCTGGTGCTGCTGTTCGGCATCGGGCTTCTACTAGGTTACGTTGCAGCCGAGCGCGTGACCTGTCTTTAA

Upstream 100 bases:

>100_bases
CGGCGACCGCGCAGCGGATGTCGGAAGACAATTTTCTGAGCGGCGACAACTCCAACTACGGCGCGATGTTCGCCAACAAG
ATCGAGGTCAAGTGCCCGTG

Downstream 100 bases:

>100_bases
CCAGCGCGCTGCAATTTCGGGCAATGCGCGACTGCAGCAAAACCGGATCGGTTGTCGTTCGTAGATCGCTTCATACGTAT
GGGTTTCATACGTATGGTGT

Product: high-affinity nickel-transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MPLRAMKSRTCLAFGLLAVAALLTLGDATLHSALAQNPFGAPKAAAEPQAGGIIGWLLAQQSAFYRQMSATIRAAKADGS
AVWTLLGISFAYGIFHAAGPGHGKAVISSYMIANEETARRGIVLSFVSALMQALVAVLIVGICAWLLNATAKTMCSAERA
IEIGSYALIALFGARLVWSKGGGFFRALQGSMRKPGLALAGVPAMAPAGAASHDHDHAHGHSHSHPLQAHAGHDHHDHGH
SHGHDHAHAHDHHGHDHAHDHAHAHDESCDHCGHSHGPTPAELAGPGGWQRGLGAVLTVGIRPCSGAILVLVFALAQGMF
WAGIAATFVMGLGTAITVATIATIAVSAKGVARRLAAGHAGAGALVMRGVEFGAAGLVLLFGIGLLLGYVAAERVTCL

Sequences:

>Translated_398_residues
MPLRAMKSRTCLAFGLLAVAALLTLGDATLHSALAQNPFGAPKAAAEPQAGGIIGWLLAQQSAFYRQMSATIRAAKADGS
AVWTLLGISFAYGIFHAAGPGHGKAVISSYMIANEETARRGIVLSFVSALMQALVAVLIVGICAWLLNATAKTMCSAERA
IEIGSYALIALFGARLVWSKGGGFFRALQGSMRKPGLALAGVPAMAPAGAASHDHDHAHGHSHSHPLQAHAGHDHHDHGH
SHGHDHAHAHDHHGHDHAHDHAHAHDESCDHCGHSHGPTPAELAGPGGWQRGLGAVLTVGIRPCSGAILVLVFALAQGMF
WAGIAATFVMGLGTAITVATIATIAVSAKGVARRLAAGHAGAGALVMRGVEFGAAGLVLLFGIGLLLGYVAAERVTCL
>Mature_397_residues
PLRAMKSRTCLAFGLLAVAALLTLGDATLHSALAQNPFGAPKAAAEPQAGGIIGWLLAQQSAFYRQMSATIRAAKADGSA
VWTLLGISFAYGIFHAAGPGHGKAVISSYMIANEETARRGIVLSFVSALMQALVAVLIVGICAWLLNATAKTMCSAERAI
EIGSYALIALFGARLVWSKGGGFFRALQGSMRKPGLALAGVPAMAPAGAASHDHDHAHGHSHSHPLQAHAGHDHHDHGHS
HGHDHAHAHDHHGHDHAHDHAHAHDESCDHCGHSHGPTPAELAGPGGWQRGLGAVLTVGIRPCSGAILVLVFALAQGMFW
AGIAATFVMGLGTAITVATIATIAVSAKGVARRLAAGHAGAGALVMRGVEFGAAGLVLLFGIGLLLGYVAAERVTCL

Specific function: Efflux system for nickel and cobalt (Potential) [H]

COG id: COG2215

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011541 [H]

Pfam domain/function: PF03824 NicO [H]

EC number: NA

Molecular weight: Translated: 40869; Mature: 40737

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PLRAMKSRTCLAFGLLAVAALLTLGDATLHSALAQNPFGAPKAAAEPQAGGIIGWLLAQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
QSAFYRQMSATIRAAKADGSAVWTLLGISFAYGIFHAAGPGHGKAVISSYMIANEETARR
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHH
GIVLSFVSALMQALVAVLIVGICAWLLNATAKTMCSAERAIEIGSYALIALFGARLVWSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GGGFFRALQGSMRKPGLALAGVPAMAPAGAASHDHDHAHGHSHSHPLQAHAGHDHHDHGH
CCCHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SHGHDHAHAHDHHGHDHAHDHAHAHDESCDHCGHSHGPTPAELAGPGGWQRGLGAVLTVG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCCHHHHHHHHHEEC
IRPCSGAILVLVFALAQGMFWAGIAATFVMGLGTAITVATIATIAVSAKGVARRLAAGHA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAGALVMRGVEFGAAGLVLLFGIGLLLGYVAAERVTCL
CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]