Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86751011

Identifier: 86751011

GI number: 86751011

Start: 4455977

End: 4456405

Strand: Reverse

Name: 86751011

Synonym: RPB_3903

Alternate gene names: NA

Gene position: 4456405-4455977 (Counterclockwise)

Preceding gene: 86751012

Following gene: 86751001

Centisome position: 83.58

GC content: 59.91

Gene sequence:

>429_bases
ATGAGAGCCGGTGACTACGTCCGGTGCAATTTTCCCTTCAGGGAGGTGGCCGGCCCCGGCCCATCGGCTCACATCGTCAT
CTGTATCGGCACCGGTCGAGTTGCGGATCGAGCCTATGCGGTGGTTGTCTATACGAGCAGCCGTGTTTCCTTTGAGGGTT
CAAGGCGGCCGCGTCAGCAGCTCTATGTCGATCAACCGCAGGCGGGTTTGCTCGGACAGAAAAAGCCGTTCGTCATTGAT
GCGAGCCGGGTCGCCCGTTTGCCGATCAATCGCGACTATTTTCCAGATCTGCGCGACGGCAGTGTGCCGACACGTGGCCA
AGATCCACGCTGCGCGCGAGCCGTCGTCGATCGTATTCGCGATCTGATAGCGGAGGGATTTGTGGTTGTGCCTGTCGATT
TGACGACGCCGCCCAAGTCGAGTGGCTGA

Upstream 100 bases:

>100_bases
TCGGCCAGGATCCGGATTCGTTCTTGACCGCGACAGCGATGAGAGCGACGACGACTATCAGGCGCGTTCTTCGACGCTCG
ACCGTCTCTTCCCCTGAGCC

Downstream 100 bases:

>100_bases
GAGCTGACATCGCTATCGCGGAGTGAGACGAGGGGGCGTGCGCTGCCCTCACCCCTTCGCCTGCCCCGCCAGTTCTTTCC
TGACCGCGGCGGCCGAGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MRAGDYVRCNFPFREVAGPGPSAHIVICIGTGRVADRAYAVVVYTSSRVSFEGSRRPRQQLYVDQPQAGLLGQKKPFVID
ASRVARLPINRDYFPDLRDGSVPTRGQDPRCARAVVDRIRDLIAEGFVVVPVDLTTPPKSSG

Sequences:

>Translated_142_residues
MRAGDYVRCNFPFREVAGPGPSAHIVICIGTGRVADRAYAVVVYTSSRVSFEGSRRPRQQLYVDQPQAGLLGQKKPFVID
ASRVARLPINRDYFPDLRDGSVPTRGQDPRCARAVVDRIRDLIAEGFVVVPVDLTTPPKSSG
>Mature_142_residues
MRAGDYVRCNFPFREVAGPGPSAHIVICIGTGRVADRAYAVVVYTSSRVSFEGSRRPRQQLYVDQPQAGLLGQKKPFVID
ASRVARLPINRDYFPDLRDGSVPTRGQDPRCARAVVDRIRDLIAEGFVVVPVDLTTPPKSSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15599; Mature: 15599

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGDYVRCNFPFREVAGPGPSAHIVICIGTGRVADRAYAVVVYTSSRVSFEGSRRPRQQ
CCCCCEEEECCCHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEECCEEEECCCCCCCCC
LYVDQPQAGLLGQKKPFVIDASRVARLPINRDYFPDLRDGSVPTRGQDPRCARAVVDRIR
EEECCCCCCCCCCCCCEEEEHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
DLIAEGFVVVPVDLTTPPKSSG
HHHHCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MRAGDYVRCNFPFREVAGPGPSAHIVICIGTGRVADRAYAVVVYTSSRVSFEGSRRPRQQ
CCCCCEEEECCCHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEECCEEEECCCCCCCCC
LYVDQPQAGLLGQKKPFVIDASRVARLPINRDYFPDLRDGSVPTRGQDPRCARAVVDRIR
EEECCCCCCCCCCCCCEEEEHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
DLIAEGFVVVPVDLTTPPKSSG
HHHHCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA