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The map label for this gene is 86750997

Identifier: 86750997

GI number: 86750997

Start: 4442769

End: 4443521

Strand: Reverse

Name: 86750997

Synonym: RPB_3889

Alternate gene names: NA

Gene position: 4443521-4442769 (Counterclockwise)

Preceding gene: 86750998

Following gene: 86750996

Centisome position: 83.34

GC content: 66.67

Gene sequence:

>753_bases
ATGAACGCCCACGCCTCGATGACCCACATGACCGAAGCCCAGCTCCGCACCGAGCTGGCGCTGTGCTATCGCCTGATCGA
CTTCTTCGGCTGGACCGAAATGATCTTCAACCACGTCTCGGTGCGGCTGCCCGGCGCGGAGAAGCGCTATCTCGTCAATC
CGTTCGGCCTCAACTACAACGAGGTGACGCCGGACAATCTGCTCACCGTCGACGTCTCCGGCGAGTTGATCGGCACCTCC
AACTACAGGCCGAACCCGGCCGGCTTCGCGCTGCACGGCGCGATTCATTCGGCGCGCGAGGATCTGCACTGCGTGCTGCA
CGCCCACACCACGCCGATGTCGGCGGTGGCGCAGAAGGCGGGCGGCCTCAGCCACGACAGCTTCTACGGCGCGCAGCTCA
CCGGCCGGGTCGGCTACCACACCTTCGAGGGCATCACGCTGTATGACGACGAGCGCGAACGCATGCTGGCGAGCCTCGGC
GACGGCGACGTGCTGATCCTGCGCAATCACGGCGTCGCGGTCGGCGCGCCGGACATTCCGCGCGCCTTCATGCTGCTGTG
GACGGTGCAGCGCGCCTGCGAAATCCAGTGCGCCGCGGGCGGCATTCCTGGTCCCGACACGCCGCTGCCGGACCACGTCC
GCCAGCAATGCGTCGACAATTCGAAAGACTTGATCGCGGAAAGCGCGTTCGCACGGCTGTTCTTCGACGGCGCGGTGCGG
CGGATGATCAAGGCCCAGGGGCCGGCGTTCTGA

Upstream 100 bases:

>100_bases
GCGCTCCGCCGCGGCGGCGGAGAGCCACGCCTGAACCGCGGCCCGCCGAAGCGCGCGCTCCGGCGGTGACAGATTTCGCA
GCAACAAGGAGCGCCTGCTC

Downstream 100 bases:

>100_bases
ACGCGGGCGTTTTGAACGCCATGAGCGGCAGCGCGCAAGGCACGGGCGCCATCGGGGCATCGGTGGCGCCCGTTACGCGC
CTGAATGTCTGCGTGGTCGG

Product: class II aldolase/adducin-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MNAHASMTHMTEAQLRTELALCYRLIDFFGWTEMIFNHVSVRLPGAEKRYLVNPFGLNYNEVTPDNLLTVDVSGELIGTS
NYRPNPAGFALHGAIHSAREDLHCVLHAHTTPMSAVAQKAGGLSHDSFYGAQLTGRVGYHTFEGITLYDDERERMLASLG
DGDVLILRNHGVAVGAPDIPRAFMLLWTVQRACEIQCAAGGIPGPDTPLPDHVRQQCVDNSKDLIAESAFARLFFDGAVR
RMIKAQGPAF

Sequences:

>Translated_250_residues
MNAHASMTHMTEAQLRTELALCYRLIDFFGWTEMIFNHVSVRLPGAEKRYLVNPFGLNYNEVTPDNLLTVDVSGELIGTS
NYRPNPAGFALHGAIHSAREDLHCVLHAHTTPMSAVAQKAGGLSHDSFYGAQLTGRVGYHTFEGITLYDDERERMLASLG
DGDVLILRNHGVAVGAPDIPRAFMLLWTVQRACEIQCAAGGIPGPDTPLPDHVRQQCVDNSKDLIAESAFARLFFDGAVR
RMIKAQGPAF
>Mature_250_residues
MNAHASMTHMTEAQLRTELALCYRLIDFFGWTEMIFNHVSVRLPGAEKRYLVNPFGLNYNEVTPDNLLTVDVSGELIGTS
NYRPNPAGFALHGAIHSAREDLHCVLHAHTTPMSAVAQKAGGLSHDSFYGAQLTGRVGYHTFEGITLYDDERERMLASLG
DGDVLILRNHGVAVGAPDIPRAFMLLWTVQRACEIQCAAGGIPGPDTPLPDHVRQQCVDNSKDLIAESAFARLFFDGAVR
RMIKAQGPAF

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family [H]

Homologues:

Organism=Homo sapiens, GI29826325, Length=201, Percent_Identity=39.8009950248756, Blast_Score=142, Evalue=4e-34,
Organism=Homo sapiens, GI29826323, Length=202, Percent_Identity=39.6039603960396, Blast_Score=141, Evalue=4e-34,
Organism=Homo sapiens, GI29826321, Length=201, Percent_Identity=39.8009950248756, Blast_Score=140, Evalue=7e-34,
Organism=Homo sapiens, GI29826319, Length=201, Percent_Identity=39.8009950248756, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI9943848, Length=201, Percent_Identity=36.318407960199, Blast_Score=129, Evalue=3e-30,
Organism=Homo sapiens, GI9951927, Length=201, Percent_Identity=36.318407960199, Blast_Score=128, Evalue=4e-30,
Organism=Homo sapiens, GI62912453, Length=201, Percent_Identity=36.318407960199, Blast_Score=128, Evalue=4e-30,
Organism=Homo sapiens, GI89276787, Length=198, Percent_Identity=33.8383838383838, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI9257190, Length=198, Percent_Identity=33.8383838383838, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI297307160, Length=198, Percent_Identity=33.8383838383838, Blast_Score=121, Evalue=5e-28,
Organism=Homo sapiens, GI297307158, Length=195, Percent_Identity=33.8461538461538, Blast_Score=121, Evalue=6e-28,
Organism=Homo sapiens, GI9257192, Length=195, Percent_Identity=33.8461538461538, Blast_Score=121, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI115533216, Length=201, Percent_Identity=40.2985074626866, Blast_Score=142, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI115533218, Length=201, Percent_Identity=40.2985074626866, Blast_Score=142, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI71989555, Length=187, Percent_Identity=36.8983957219251, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71989560, Length=187, Percent_Identity=36.8983957219251, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71989550, Length=187, Percent_Identity=36.8983957219251, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71989544, Length=187, Percent_Identity=36.8983957219251, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71989541, Length=187, Percent_Identity=36.8983957219251, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI281363755, Length=191, Percent_Identity=34.0314136125654, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI281363751, Length=191, Percent_Identity=34.0314136125654, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24655690, Length=191, Percent_Identity=34.0314136125654, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI281363763, Length=191, Percent_Identity=34.0314136125654, Blast_Score=116, Evalue=1e-26,
Organism=Drosophila melanogaster, GI281363757, Length=191, Percent_Identity=34.0314136125654, Blast_Score=116, Evalue=1e-26,
Organism=Drosophila melanogaster, GI17136738, Length=191, Percent_Identity=34.0314136125654, Blast_Score=116, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24655685, Length=191, Percent_Identity=34.0314136125654, Blast_Score=116, Evalue=1e-26,
Organism=Drosophila melanogaster, GI281363761, Length=191, Percent_Identity=34.0314136125654, Blast_Score=116, Evalue=1e-26,
Organism=Drosophila melanogaster, GI281363759, Length=191, Percent_Identity=34.0314136125654, Blast_Score=116, Evalue=1e-26,
Organism=Drosophila melanogaster, GI281363753, Length=191, Percent_Identity=34.0314136125654, Blast_Score=116, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 27434; Mature: 27434

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAHASMTHMTEAQLRTELALCYRLIDFFGWTEMIFNHVSVRLPGAEKRYLVNPFGLNYN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEECCCCCCCC
EVTPDNLLTVDVSGELIGTSNYRPNPAGFALHGAIHSAREDLHCVLHAHTTPMSAVAQKA
CCCCCCEEEEEECCEEEECCCCCCCCCCEEHHHHHHHHHHHHEEEEEECCCCHHHHHHHH
GGLSHDSFYGAQLTGRVGYHTFEGITLYDDERERMLASLGDGDVLILRNHGVAVGAPDIP
CCCCCCCCCCEEEECCCCEEEECCEEEECCHHHHHHHHCCCCCEEEEECCCEEECCCCCH
RAFMLLWTVQRACEIQCAAGGIPGPDTPLPDHVRQQCVDNSKDLIAESAFARLFFDGAVR
HHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RMIKAQGPAF
HHHHHCCCCC
>Mature Secondary Structure
MNAHASMTHMTEAQLRTELALCYRLIDFFGWTEMIFNHVSVRLPGAEKRYLVNPFGLNYN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEECCCCCCCC
EVTPDNLLTVDVSGELIGTSNYRPNPAGFALHGAIHSAREDLHCVLHAHTTPMSAVAQKA
CCCCCCEEEEEECCEEEECCCCCCCCCCEEHHHHHHHHHHHHEEEEEECCCCHHHHHHHH
GGLSHDSFYGAQLTGRVGYHTFEGITLYDDERERMLASLGDGDVLILRNHGVAVGAPDIP
CCCCCCCCCCEEEECCCCEEEECCEEEECCHHHHHHHHCCCCCEEEEECCCEEECCCCCH
RAFMLLWTVQRACEIQCAAGGIPGPDTPLPDHVRQQCVDNSKDLIAESAFARLFFDGAVR
HHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RMIKAQGPAF
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]