Click here to switch to the map view.

The map label for this gene is trxB [C]

Identifier: 86750949

GI number: 86750949

Start: 4387872

End: 4388900

Strand: Reverse

Name: trxB [C]

Synonym: RPB_3841

Alternate gene names: 86750949

Gene position: 4388900-4387872 (Counterclockwise)

Preceding gene: 86750951

Following gene: 86750947

Centisome position: 82.32

GC content: 62.0

Gene sequence:

>1029_bases
ATGACCGAAACGATCAAAACCGATGTGCTGATTGTCGGCGCGGGTCCGTGCGGACTATTCGCCGTGTTCGAACTGGGCCT
GCTCGATATCAAGACTCACCTCGTCGACATTCTCGACAAGGTCGGCGGCCAGTGCGCCGAGCTGTATCCGGAAAAGCCGA
TCTACGACATTCCCGGCGTTCCGATGATCACGGGCCACGGCCTGACCGAAGCGCTGATGGAGCAGATCAAGCCGTTCAAT
CCGACCATCCATCTCAACGAGATGATCGAAAGCGTCGAGAAGATCGGCGACCCGGAGTTCCGCGTCACCACCAATGCCGG
CACGGTGTTCGAGTGCAAGGTGCTGGTCGTCGCCGCGGGCGGCGGTTCGTTCCAGCCGAAGCGGCCGCCGGTGCCGGGCG
TCGAAGCCTATGAAGGCAAGTCGGTGCACTACGCGGTGCGCAAGATGGAAGAGTTCCGCGGCAAGGACATCGTCATCGTC
GGTGGCGGCGATAGCGCGCTGGACTGGACGCTGAACCTCAACCCGATCTGCAAGAGCATGACGCTGGTGCATCGCCGCGA
CGATTTTCGCGGCGCGCCGCACTCGGTCGAGCAGATGCGCCAGCTGGTCGCGAGCGGCAAGCTCGATCTCAAGATCGGCC
AGATCACCGAACTGCAGGGCGAGGACGGCCAGCTCTCGGGCGCCACCATCAAGCTCAACGGCAACAGCATCGCGCAGATC
AAGTGCGATGCGATGCTGCCGTTCTTCGGGCTGACGATGAAGCTCGGCCCGGTGGCGAATTGGGGCCTGCAGCTCGAGAA
CAATCTGATCCCGGTCGACACCGGCACGTTCGAGACCAACGTCCCCGGCATCTTCGCGATCGGCGACATCAACACCTATC
CGGGCAAGCTGAAGCTGATCCTGTCGGGCTTCCACGAGGGCGCGCTGATGGCGCAGAAGGCGGTGAAATACGTCTATCCC
GACAAGCGCGTCGTGTTCCAGTACACCACCTCGTCGACCAATCTGCAGAAGAAGCTCGGCGTGAACTGA

Upstream 100 bases:

>100_bases
CGCAAGCCATTTATGGCTTTTCTCCCCCGCCGGGCTTGGCTAGACAAGCCGCGGCCGGACCGCCCGCGTCCGAAAATTCT
TCAACACGAAAAGAATCACC

Downstream 100 bases:

>100_bases
GCGCGCGAACAGCTCGGCGGCGCTGCTGCCGGGCGATCACAGCAAGTCGTTAGTTCAGGGCGCGCCGCAAGGTGCGCCCT
TTGTTTTGCGCCTGCCTGCG

Product: thioredoxin reductase

Products: NA

Alternate protein names: FNR; Fd-NADP+ reductase

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MTETIKTDVLIVGAGPCGLFAVFELGLLDIKTHLVDILDKVGGQCAELYPEKPIYDIPGVPMITGHGLTEALMEQIKPFN
PTIHLNEMIESVEKIGDPEFRVTTNAGTVFECKVLVVAAGGGSFQPKRPPVPGVEAYEGKSVHYAVRKMEEFRGKDIVIV
GGGDSALDWTLNLNPICKSMTLVHRRDDFRGAPHSVEQMRQLVASGKLDLKIGQITELQGEDGQLSGATIKLNGNSIAQI
KCDAMLPFFGLTMKLGPVANWGLQLENNLIPVDTGTFETNVPGIFAIGDINTYPGKLKLILSGFHEGALMAQKAVKYVYP
DKRVVFQYTTSSTNLQKKLGVN

Sequences:

>Translated_342_residues
MTETIKTDVLIVGAGPCGLFAVFELGLLDIKTHLVDILDKVGGQCAELYPEKPIYDIPGVPMITGHGLTEALMEQIKPFN
PTIHLNEMIESVEKIGDPEFRVTTNAGTVFECKVLVVAAGGGSFQPKRPPVPGVEAYEGKSVHYAVRKMEEFRGKDIVIV
GGGDSALDWTLNLNPICKSMTLVHRRDDFRGAPHSVEQMRQLVASGKLDLKIGQITELQGEDGQLSGATIKLNGNSIAQI
KCDAMLPFFGLTMKLGPVANWGLQLENNLIPVDTGTFETNVPGIFAIGDINTYPGKLKLILSGFHEGALMAQKAVKYVYP
DKRVVFQYTTSSTNLQKKLGVN
>Mature_341_residues
TETIKTDVLIVGAGPCGLFAVFELGLLDIKTHLVDILDKVGGQCAELYPEKPIYDIPGVPMITGHGLTEALMEQIKPFNP
TIHLNEMIESVEKIGDPEFRVTTNAGTVFECKVLVVAAGGGSFQPKRPPVPGVEAYEGKSVHYAVRKMEEFRGKDIVIVG
GGDSALDWTLNLNPICKSMTLVHRRDDFRGAPHSVEQMRQLVASGKLDLKIGQITELQGEDGQLSGATIKLNGNSIAQIK
CDAMLPFFGLTMKLGPVANWGLQLENNLIPVDTGTFETNVPGIFAIGDINTYPGKLKLILSGFHEGALMAQKAVKYVYPD
KRVVFQYTTSSTNLQKKLGVN

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ferredoxin--NADP reductase type 2 family

Homologues:

Organism=Escherichia coli, GI1787114, Length=331, Percent_Identity=27.190332326284, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI87081763, Length=230, Percent_Identity=27.8260869565217, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): FENR_RHOP2 (Q2ITC6)

Other databases:

- EMBL:   CP000250
- RefSeq:   YP_487445.1
- ProteinModelPortal:   Q2ITC6
- STRING:   Q2ITC6
- GeneID:   3911644
- GenomeReviews:   CP000250_GR
- KEGG:   rpb:RPB_3841
- eggNOG:   COG0492
- HOGENOM:   HBG669726
- OMA:   FQVFELG
- ProtClustDB:   CLSK863087
- BioCyc:   RPAL316058:RPB_3841-MONOMER
- HAMAP:   MF_01685
- InterPro:   IPR013027
- InterPro:   IPR022890
- InterPro:   IPR001327
- InterPro:   IPR000103
- PRINTS:   PR00368
- PRINTS:   PR00469

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2

EC number: =1.18.1.2

Molecular weight: Translated: 37140; Mature: 37008

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: BINDING 17-17 BINDING 36-36 BINDING 44-44 BINDING 49-49 BINDING 89-89 BINDING 124-124 BINDING 289-289 BINDING 330-330

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETIKTDVLIVGAGPCGLFAVFELGLLDIKTHLVDILDKVGGQCAELYPEKPIYDIPGV
CCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCC
PMITGHGLTEALMEQIKPFNPTIHLNEMIESVEKIGDPEFRVTTNAGTVFECKVLVVAAG
CEEECCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEEEC
GGSFQPKRPPVPGVEAYEGKSVHYAVRKMEEFRGKDIVIVGGGDSALDWTLNLNPICKSM
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCHHHHHH
TLVHRRDDFRGAPHSVEQMRQLVASGKLDLKIGQITELQGEDGQLSGATIKLNGNSIAQI
HHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEECCEEEECCCCCCCCCEEEEECCCEEEEE
KCDAMLPFFGLTMKLGPVANWGLQLENNLIPVDTGTFETNVPGIFAIGDINTYPGKLKLI
EECEECCHHHCEEEECCCCCCCEEECCCEEECCCCCCCCCCCCEEEECCCCCCCCEEEEE
LSGFHEGALMAQKAVKYVYPDKRVVFQYTTSSTNLQKKLGVN
EECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCCC
>Mature Secondary Structure 
TETIKTDVLIVGAGPCGLFAVFELGLLDIKTHLVDILDKVGGQCAELYPEKPIYDIPGV
CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCC
PMITGHGLTEALMEQIKPFNPTIHLNEMIESVEKIGDPEFRVTTNAGTVFECKVLVVAAG
CEEECCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEEEC
GGSFQPKRPPVPGVEAYEGKSVHYAVRKMEEFRGKDIVIVGGGDSALDWTLNLNPICKSM
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCHHHHHH
TLVHRRDDFRGAPHSVEQMRQLVASGKLDLKIGQITELQGEDGQLSGATIKLNGNSIAQI
HHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEECCEEEECCCCCCCCCEEEEECCCEEEEE
KCDAMLPFFGLTMKLGPVANWGLQLENNLIPVDTGTFETNVPGIFAIGDINTYPGKLKLI
EECEECCHHHCEEEECCCCCCCEEECCCEEECCCCCCCCCCCCEEEECCCCCCCCEEEEE
LSGFHEGALMAQKAVKYVYPDKRVVFQYTTSSTNLQKKLGVN
EECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA