Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86750947
Identifier: 86750947
GI number: 86750947
Start: 4384806
End: 4386140
Strand: Reverse
Name: 86750947
Synonym: RPB_3839
Alternate gene names: NA
Gene position: 4386140-4384806 (Counterclockwise)
Preceding gene: 86750949
Following gene: 86750946
Centisome position: 82.27
GC content: 68.76
Gene sequence:
>1335_bases TTGGCGCAGCCCCCCGACAGCCAGACCCCGCCGCCGCGACAACCCTGGCTGTGGATGGACGTATCGACCAGCGCTCGCGC GCGCTCCGGCCAGATGAACGGCACGCTGCGGGTCGAGCACAGAATCGCCACCGCGTTGCGCGAACGGATCGGACCGCAGC TCGGATTTTGCCGCTACGAACCGCTGCGACAGGACTACGTGCCGGTTGCGGCGGTGCCCGATCTCGGCGCCAAGCCGGTC GCCGCGGCGAAGCCGAAGGCGGCGCGTGCCACGATGCTGTCGTCGATCAAGCCGCTCGGCAAGAAACTCGAACGCGCGGT TCGTACTTCGGTGCGTGGCGCTGTCGCGCCGCTGCTGCAGAAAATGGCCGGCGGCGAGGGGCTGCCGCCGCCCGGCCCGG CTGCGGGCCACGAGGTGCTGCTGCTCGCCGGCGAGAACTGGTCGCGGGTCGACTACGCAGCGGTGGCGCGGATGCGCCGC GCGCGCGGAACCCGGATCGCGGCGGTGTGCCAGGACTTCATCCCGGTGGTCGCGCCGCAATTCTTCGCCGACGGCGAGTT CGTCACGCAGTTCGAGGCCTATGCGCAGTTCCTGATCCGCGAATGCGACATGGTGATTTCGATTTCCGACTCCACCAGCG CCGACGTGCGCGCCTATGCGCAGCGCCATGGCGGGTTGCGCGGCGCGATCGAGGTGGTGCATCTGGGCGCCGATCTGGCG ACGCCGGCGACCGCGCGCCGGCCCGCTGCGCTCGGCGACGGGCAGGCGCAGCGCTTCGTGCTCAGCGTCTCGACCATCCA GTCGCGCAAGAATTTCGATCTGCTGTATCACTTGTGGCGGCGCTTGACCGAGCAGGGCACGCCTCGTCTGCCGACGCTGG TGATCGTCGGGCAGCCCGGCTTCGGCAGTGCCGACCTGCTGTGGCAGATCGCGCATGATCCGGTCACCGCGTCGTCGATC CTGCATCTGCCTCGCGCTGGCGACGAGGAACTGGCGTGGCTGTACCGGAACTGCGCGTTTACGCTGTATCCCTCGTTCTA CGAGGGCTGGGGACTGCCGGTGTCGGAGAGCCTCGCCTTCGGCAAGTACTGTCTCGCATCGAACACGTCGTCACTGCCGG AAGCCGGCGCCGGCCTCGCGGGGCACCTCGATCCGCTGGATTTCGCAGCCTGGCGCGATGCGGTGCTTGACCTGATCCAT TCCCCTGAGCAACTTGCCGGATACGAAGCCGCGATCCGGTCGAACTATCGCCCGGTAACCTGGGCGCAATCCGCCGGCCG GATGGTGGAGGTGCTGCGCAGCGTAGCGGCTGCCCCTGCCGGTTTCACGAGCTAG
Upstream 100 bases:
>100_bases CCCGAGTCGACCTCGATCCGATTGATTGCAGCGCGGGCCTCGCCGCGCATGAATATTATTCAGGCCGGCTCCGAAGCCGG CACCACGCGACGGACAGAAC
Downstream 100 bases:
>100_bases GAGTCCAATGGTATCCGTCGTCGCCCGATCGTCGCGCGCCCGGCAGACTCTGGCGCAGACCCGCGACTGGCTGATACGCA TGCGGGCCGGCGAGAAGCTG
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Mannosyltransferase; Glycosyl Transferase Group 1 Family Protein; Glycosyltransferase WbpX; Mannosyltransferase A; Glycosyl Transferase Group 1 Protein; Lipopolysaccharide N-Acetylglucosaminyltransferase II; Lipopolysaccharide N-Acetylglucosaminyltransferase I; Mannosyl Transferase B; Glycosyl Transferase Protein; LPS Side Chain Defect Mannosyl Transferase; Bifunctional Glycosyltransferase; Mannosyltransferase B
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MAQPPDSQTPPPRQPWLWMDVSTSARARSGQMNGTLRVEHRIATALRERIGPQLGFCRYEPLRQDYVPVAAVPDLGAKPV AAAKPKAARATMLSSIKPLGKKLERAVRTSVRGAVAPLLQKMAGGEGLPPPGPAAGHEVLLLAGENWSRVDYAAVARMRR ARGTRIAAVCQDFIPVVAPQFFADGEFVTQFEAYAQFLIRECDMVISISDSTSADVRAYAQRHGGLRGAIEVVHLGADLA TPATARRPAALGDGQAQRFVLSVSTIQSRKNFDLLYHLWRRLTEQGTPRLPTLVIVGQPGFGSADLLWQIAHDPVTASSI LHLPRAGDEELAWLYRNCAFTLYPSFYEGWGLPVSESLAFGKYCLASNTSSLPEAGAGLAGHLDPLDFAAWRDAVLDLIH SPEQLAGYEAAIRSNYRPVTWAQSAGRMVEVLRSVAAAPAGFTS
Sequences:
>Translated_444_residues MAQPPDSQTPPPRQPWLWMDVSTSARARSGQMNGTLRVEHRIATALRERIGPQLGFCRYEPLRQDYVPVAAVPDLGAKPV AAAKPKAARATMLSSIKPLGKKLERAVRTSVRGAVAPLLQKMAGGEGLPPPGPAAGHEVLLLAGENWSRVDYAAVARMRR ARGTRIAAVCQDFIPVVAPQFFADGEFVTQFEAYAQFLIRECDMVISISDSTSADVRAYAQRHGGLRGAIEVVHLGADLA TPATARRPAALGDGQAQRFVLSVSTIQSRKNFDLLYHLWRRLTEQGTPRLPTLVIVGQPGFGSADLLWQIAHDPVTASSI LHLPRAGDEELAWLYRNCAFTLYPSFYEGWGLPVSESLAFGKYCLASNTSSLPEAGAGLAGHLDPLDFAAWRDAVLDLIH SPEQLAGYEAAIRSNYRPVTWAQSAGRMVEVLRSVAAAPAGFTS >Mature_443_residues AQPPDSQTPPPRQPWLWMDVSTSARARSGQMNGTLRVEHRIATALRERIGPQLGFCRYEPLRQDYVPVAAVPDLGAKPVA AAKPKAARATMLSSIKPLGKKLERAVRTSVRGAVAPLLQKMAGGEGLPPPGPAAGHEVLLLAGENWSRVDYAAVARMRRA RGTRIAAVCQDFIPVVAPQFFADGEFVTQFEAYAQFLIRECDMVISISDSTSADVRAYAQRHGGLRGAIEVVHLGADLAT PATARRPAALGDGQAQRFVLSVSTIQSRKNFDLLYHLWRRLTEQGTPRLPTLVIVGQPGFGSADLLWQIAHDPVTASSIL HLPRAGDEELAWLYRNCAFTLYPSFYEGWGLPVSESLAFGKYCLASNTSSLPEAGAGLAGHLDPLDFAAWRDAVLDLIHS PEQLAGYEAAIRSNYRPVTWAQSAGRMVEVLRSVAAAPAGFTS
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48052; Mature: 47921
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQPPDSQTPPPRQPWLWMDVSTSARARSGQMNGTLRVEHRIATALRERIGPQLGFCRYE CCCCCCCCCCCCCCCEEEEECCCCCHHCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCC PLRQDYVPVAAVPDLGAKPVAAAKPKAARATMLSSIKPLGKKLERAVRTSVRGAVAPLLQ CHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMAGGEGLPPPGPAAGHEVLLLAGENWSRVDYAAVARMRRARGTRIAAVCQDFIPVVAPQ HHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FFADGEFVTQFEAYAQFLIRECDMVISISDSTSADVRAYAQRHGGLRGAIEVVHLGADLA HHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCHHEEEEEEECCCCC TPATARRPAALGDGQAQRFVLSVSTIQSRKNFDLLYHLWRRLTEQGTPRLPTLVIVGQPG CCCCCCCCCCCCCCCHHEEEEEHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCC FGSADLLWQIAHDPVTASSILHLPRAGDEELAWLYRNCAFTLYPSFYEGWGLPVSESLAF CCCHHHHEEECCCCCCHHHHHCCCCCCCHHHHHHHHHCCEEECCHHHCCCCCCHHHHHHH GKYCLASNTSSLPEAGAGLAGHLDPLDFAAWRDAVLDLIHSPEQLAGYEAAIRSNYRPVT HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCH WAQSAGRMVEVLRSVAAAPAGFTS HHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AQPPDSQTPPPRQPWLWMDVSTSARARSGQMNGTLRVEHRIATALRERIGPQLGFCRYE CCCCCCCCCCCCCCEEEEECCCCCHHCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCC PLRQDYVPVAAVPDLGAKPVAAAKPKAARATMLSSIKPLGKKLERAVRTSVRGAVAPLLQ CHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMAGGEGLPPPGPAAGHEVLLLAGENWSRVDYAAVARMRRARGTRIAAVCQDFIPVVAPQ HHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FFADGEFVTQFEAYAQFLIRECDMVISISDSTSADVRAYAQRHGGLRGAIEVVHLGADLA HHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCHHEEEEEEECCCCC TPATARRPAALGDGQAQRFVLSVSTIQSRKNFDLLYHLWRRLTEQGTPRLPTLVIVGQPG CCCCCCCCCCCCCCCHHEEEEEHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCC FGSADLLWQIAHDPVTASSILHLPRAGDEELAWLYRNCAFTLYPSFYEGWGLPVSESLAF CCCHHHHEEECCCCCCHHHHHCCCCCCCHHHHHHHHHCCEEECCHHHCCCCCCHHHHHHH GKYCLASNTSSLPEAGAGLAGHLDPLDFAAWRDAVLDLIHSPEQLAGYEAAIRSNYRPVT HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCH WAQSAGRMVEVLRSVAAAPAGFTS HHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA