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The map label for this gene is fdxB [H]

Identifier: 86750951

GI number: 86750951

Start: 4389535

End: 4389855

Strand: Reverse

Name: fdxB [H]

Synonym: RPB_3843

Alternate gene names: 86750951

Gene position: 4389855-4389535 (Counterclockwise)

Preceding gene: 86750952

Following gene: 86750949

Centisome position: 82.34

GC content: 65.42

Gene sequence:

>321_bases
ATGGCCAAGATTCACTTTGTTGATCACTCCGGAGAGACCCGCATCGTCGACGTCGAGAACGGCGCGACCGTGATGGAAGC
GGCGATCCGCAACGCCATCCCCGGCATCGAGGCCGAATGCGGCGGCGCCTGCGCCTGCGCGACCTGCCACGTCTATGTCG
ACGAGGCCTGGCGCGAGAAGGTCGGCGGCCCCTCGCCGATGGAAGAGGACATGCTCGACTTCGGCTACGACGTGCGCCCG
AACTCGCGGCTGTCGTGCCAGATCAAGGTCTCGGACGAACTCGACGGCCTGGTGATCTCGACCCCGGATCGTCAGGCGTA
A

Upstream 100 bases:

>100_bases
TTTTGCTCGCCGCGGCGCTGGCGGAAAGCCGATCGACCCGCTATAGGACAGCCCGTCATCCTTCCCCTGTCCGAACGAGC
AGAGCGTCCGACGAGCAATC

Downstream 100 bases:

>100_bases
TCACGCCCGCGGCGTCCGCTCTGCGTGATCGACGCCGCGCAGCCACCACGGCGCCAGGTTGGCGATCAATTGATCGGGCA
ACGGCGTCGGCTTGCGGCTG

Product: ferredoxin

Products: NA

Alternate protein names: FdII [H]

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MAKIHFVDHSGETRIVDVENGATVMEAAIRNAIPGIEAECGGACACATCHVYVDEAWREKVGGPSPMEEDMLDFGYDVRP
NSRLSCQIKVSDELDGLVISTPDRQA

Sequences:

>Translated_106_residues
MAKIHFVDHSGETRIVDVENGATVMEAAIRNAIPGIEAECGGACACATCHVYVDEAWREKVGGPSPMEEDMLDFGYDVRP
NSRLSCQIKVSDELDGLVISTPDRQA
>Mature_105_residues
AKIHFVDHSGETRIVDVENGATVMEAAIRNAIPGIEAECGGACACATCHVYVDEAWREKVGGPSPMEEDMLDFGYDVRPN
SRLSCQIKVSDELDGLVISTPDRQA

Specific function: Ferredoxin Are Iron-Sulfur Proteins That Transfer Electrons In A Wide Variety Of Metabolic Reactions. Although The Function Of This Ferredoxin Is Unknown It Is Probable That It Has A Role As A Cellular Electron Transfer Protein. Involved In The In Vivo As

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI72534754, Length=97, Percent_Identity=39.1752577319588, Blast_Score=67, Evalue=3e-12,
Organism=Homo sapiens, GI4758352, Length=105, Percent_Identity=32.3809523809524, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1788874, Length=105, Percent_Identity=39.0476190476191, Blast_Score=69, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17544202, Length=99, Percent_Identity=41.4141414141414, Blast_Score=75, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6325004, Length=100, Percent_Identity=39, Blast_Score=80, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24661503, Length=102, Percent_Identity=34.3137254901961, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 11468; Mature: 11337

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIHFVDHSGETRIVDVENGATVMEAAIRNAIPGIEAECGGACACATCHVYVDEAWREK
CCEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECHHHHHH
VGGPSPMEEDMLDFGYDVRPNSRLSCQIKVSDELDGLVISTPDRQA
CCCCCCCCHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCC
>Mature Secondary Structure 
AKIHFVDHSGETRIVDVENGATVMEAAIRNAIPGIEAECGGACACATCHVYVDEAWREK
CEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECHHHHHH
VGGPSPMEEDMLDFGYDVRPNSRLSCQIKVSDELDGLVISTPDRQA
CCCCCCCCHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7751304; 11259647 [H]