Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is ordL [H]

Identifier: 86750931

GI number: 86750931

Start: 4367646

End: 4369109

Strand: Reverse

Name: ordL [H]

Synonym: RPB_3822

Alternate gene names: 86750931

Gene position: 4369109-4367646 (Counterclockwise)

Preceding gene: 86750934

Following gene: 86750930

Centisome position: 81.95

GC content: 72.81

Gene sequence:

>1464_bases
ATGACCCCTCCGGCGACAAGTGCGACCAATGGACCGGACCCGTTCGCGCCCGACACGGCGGCGAATCCGCACGCGCGGCT
GACCTTCGACCTCGACGTCGACCTGTGCGTGATCGGCGCCGGCCTGGCCGGATTGTCGGTGGCGCTGGAGGCGGCGCAGC
AGGGCCTCAGCGTCGCCGTGCTCGAAGCGCGGCGGGTCGGCTGGGGCGCGTCCGGCGCCACGCTCGGCAGCGTGATGCCG
GGCTACGGCGTGCCGATCGGCGACCTGATCGAACGGATCGGCGTCGCCCACACGGGCGAATTGTGGACATTGTCGCGCGA
GGGCATGGCGATCGTCCGCGCGCGCGCCACCGAGGAGACGATGCCGGGCATCGCGCTGACGACGGGCGCGCTCGAAGTCT
CCAATGTCGATCTCGGCGACCGGCTGATCGATCGGTTGCAGACGCTCGGCGTCGATTTCGGCACCGCGGTCGAGGGCTGG
CAGATCGAGCGCGTGCGCGACATGCTGCGGACCAACCGCTATTTCCACGGCATCCATTTTCCCGACGCGTTCCAGCTCGA
TGGCCGCCGCTATGTTCGCGGGCTGGAGGCGATGGCGCGACGCGCCGGCGTCCGGATCTTCGAGGACACGCCGGCGCTCG
GGATCGACTTCTCCGGCATCCGCAAGCGCGTGGCCACGCCGAACGCGCGGCTGCGCGCCTCCGACATCGTGCTCGCCGGC
AATGTCGATCTCGGCGCGCCGTCGCCGCGGCTGACCGCGACGCTGCTGCCGATGTGGCGCGCCGCCGTGCTCACCGAGCC
GCTCGGGGAGCGCCTGGCCGACGCGATCGCCTTTGCCGGCTCGATTGCCGATACCGACGGCGTCGATCACTACCGCATCG
TCGGCGGCGACCGGCTGCTGTGGACCGGGCCGGAGACGACGTTCGAGGTCGCACCGAAGCGGCTCGAGGGCCTGATCCGG
CGGCGGATCGCGGCGCTGTATCCGCAACTCGGCGCCGTGGCGATCGCGCAAAGCTGGAGCGGGGCGATCGGCCAGACCGT
GCACGGCATGCCGCAGATCGGCGAATTGCGCCGCGGGCTGTGGGTGGCGAGCGGGTTCGGCCGACAGGGGCTGGCGACCA
CCGCGATCGCCGGCCGGCTGATCGCGCAGGGCATCGTCCATGGCGACCAGCGCTGGCGGCTGTTCGATCCGTTCGAACTG
GTCTGGGCCGGCGGCCGGATCGGCCGCGTTGTCGGCCAGGGCGTCAGCATCGTCGAACGCCGCGCCGCGATGACCGCGGG
CCTGCTGGCGCGCTATCGCGAACGCGCCGCCGTGCGCAGCCGGCTCCGCGAGGAGCGGCTGCAGGCCGCCAACAGCCGCG
TGCGAAGTGCCGGGGGGCAGCGGCGGGCTGACGCGCCGCCGCGGGATCGCGCCGAGCCCGGCGCACAGGACGCCCGCCGC
GGTGAACCCGGCCCGATCGAGTGA

Upstream 100 bases:

>100_bases
CGGCGCATGGATCCCTTCCGGCGGCGCGAGCTTGCGGATTAATCGAGAACCCGGGACAGGACAAGGTGACAAGCGCCCGG
GCTGTCCGTAAGGAAACGTC

Downstream 100 bases:

>100_bases
TCTTGCCGCAGCGCACGCCGCGCTTGCTCGCGACAATGTGAGCGCGCCGGCAGGGCGCTGATGTAACTTTGAGGGTGCCG
CCTGCGTATCTCGGACCAAG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MTPPATSATNGPDPFAPDTAANPHARLTFDLDVDLCVIGAGLAGLSVALEAAQQGLSVAVLEARRVGWGASGATLGSVMP
GYGVPIGDLIERIGVAHTGELWTLSREGMAIVRARATEETMPGIALTTGALEVSNVDLGDRLIDRLQTLGVDFGTAVEGW
QIERVRDMLRTNRYFHGIHFPDAFQLDGRRYVRGLEAMARRAGVRIFEDTPALGIDFSGIRKRVATPNARLRASDIVLAG
NVDLGAPSPRLTATLLPMWRAAVLTEPLGERLADAIAFAGSIADTDGVDHYRIVGGDRLLWTGPETTFEVAPKRLEGLIR
RRIAALYPQLGAVAIAQSWSGAIGQTVHGMPQIGELRRGLWVASGFGRQGLATTAIAGRLIAQGIVHGDQRWRLFDPFEL
VWAGGRIGRVVGQGVSIVERRAAMTAGLLARYRERAAVRSRLREERLQAANSRVRSAGGQRRADAPPRDRAEPGAQDARR
GEPGPIE

Sequences:

>Translated_487_residues
MTPPATSATNGPDPFAPDTAANPHARLTFDLDVDLCVIGAGLAGLSVALEAAQQGLSVAVLEARRVGWGASGATLGSVMP
GYGVPIGDLIERIGVAHTGELWTLSREGMAIVRARATEETMPGIALTTGALEVSNVDLGDRLIDRLQTLGVDFGTAVEGW
QIERVRDMLRTNRYFHGIHFPDAFQLDGRRYVRGLEAMARRAGVRIFEDTPALGIDFSGIRKRVATPNARLRASDIVLAG
NVDLGAPSPRLTATLLPMWRAAVLTEPLGERLADAIAFAGSIADTDGVDHYRIVGGDRLLWTGPETTFEVAPKRLEGLIR
RRIAALYPQLGAVAIAQSWSGAIGQTVHGMPQIGELRRGLWVASGFGRQGLATTAIAGRLIAQGIVHGDQRWRLFDPFEL
VWAGGRIGRVVGQGVSIVERRAAMTAGLLARYRERAAVRSRLREERLQAANSRVRSAGGQRRADAPPRDRAEPGAQDARR
GEPGPIE
>Mature_486_residues
TPPATSATNGPDPFAPDTAANPHARLTFDLDVDLCVIGAGLAGLSVALEAAQQGLSVAVLEARRVGWGASGATLGSVMPG
YGVPIGDLIERIGVAHTGELWTLSREGMAIVRARATEETMPGIALTTGALEVSNVDLGDRLIDRLQTLGVDFGTAVEGWQ
IERVRDMLRTNRYFHGIHFPDAFQLDGRRYVRGLEAMARRAGVRIFEDTPALGIDFSGIRKRVATPNARLRASDIVLAGN
VDLGAPSPRLTATLLPMWRAAVLTEPLGERLADAIAFAGSIADTDGVDHYRIVGGDRLLWTGPETTFEVAPKRLEGLIRR
RIAALYPQLGAVAIAQSWSGAIGQTVHGMPQIGELRRGLWVASGFGRQGLATTAIAGRLIAQGIVHGDQRWRLFDPFELV
WAGGRIGRVVGQGVSIVERRAAMTAGLLARYRERAAVRSRLREERLQAANSRVRSAGGQRRADAPPRDRAEPGAQDARRG
EPGPIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787559, Length=415, Percent_Identity=29.1566265060241, Blast_Score=121, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 52198; Mature: 52067

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPPATSATNGPDPFAPDTAANPHARLTFDLDVDLCVIGAGLAGLSVALEAAQQGLSVAV
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHCCCEEEE
LEARRVGWGASGATLGSVMPGYGVPIGDLIERIGVAHTGELWTLSREGMAIVRARATEET
EHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCHHH
MPGIALTTGALEVSNVDLGDRLIDRLQTLGVDFGTAVEGWQIERVRDMLRTNRYFHGIHF
CCCEEEEECCEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHCCCEEECCC
PDAFQLDGRRYVRGLEAMARRAGVRIFEDTPALGIDFSGIRKRVATPNARLRASDIVLAG
CCCEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCCCCEEECCEEEEC
NVDLGAPSPRLTATLLPMWRAAVLTEPLGERLADAIAFAGSIADTDGVDHYRIVGGDRLL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEE
WTGPETTFEVAPKRLEGLIRRRIAALYPQLGAVAIAQSWSGAIGQTVHGMPQIGELRRGL
ECCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHCE
WVASGFGRQGLATTAIAGRLIAQGIVHGDQRWRLFDPFELVWAGGRIGRVVGQGVSIVER
EEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCHHHEECCCHHHHHHHCCHHHHHH
RAAMTAGLLARYRERAAVRSRLREERLQAANSRVRSAGGQRRADAPPRDRAEPGAQDARR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCC
GEPGPIE
CCCCCCC
>Mature Secondary Structure 
TPPATSATNGPDPFAPDTAANPHARLTFDLDVDLCVIGAGLAGLSVALEAAQQGLSVAV
CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHCCCEEEE
LEARRVGWGASGATLGSVMPGYGVPIGDLIERIGVAHTGELWTLSREGMAIVRARATEET
EHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCHHH
MPGIALTTGALEVSNVDLGDRLIDRLQTLGVDFGTAVEGWQIERVRDMLRTNRYFHGIHF
CCCEEEEECCEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHCCCEEECCC
PDAFQLDGRRYVRGLEAMARRAGVRIFEDTPALGIDFSGIRKRVATPNARLRASDIVLAG
CCCEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCCCCEEECCEEEEC
NVDLGAPSPRLTATLLPMWRAAVLTEPLGERLADAIAFAGSIADTDGVDHYRIVGGDRLL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEE
WTGPETTFEVAPKRLEGLIRRRIAALYPQLGAVAIAQSWSGAIGQTVHGMPQIGELRRGL
ECCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHCE
WVASGFGRQGLATTAIAGRLIAQGIVHGDQRWRLFDPFELVWAGGRIGRVVGQGVSIVER
EEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCHHHEECCCHHHHHHHCCHHHHHH
RAAMTAGLLARYRERAAVRSRLREERLQAANSRVRSAGGQRRADAPPRDRAEPGAQDARR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCC
GEPGPIE
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]