Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is fieF [H]
Identifier: 86750546
GI number: 86750546
Start: 3933915
End: 3935351
Strand: Direct
Name: fieF [H]
Synonym: RPB_3435
Alternate gene names: 86750546
Gene position: 3933915-3935351 (Clockwise)
Preceding gene: 86750545
Following gene: 86750547
Centisome position: 73.78
GC content: 67.99
Gene sequence:
>1437_bases ATGGCGATCCGCTTCGGCCGGCTTTTATGTTCAGGATCGGGCTGCTACACCGCGCCCATGAGCAATTTCGCCAGCACCAA ATCGCGTGTGGCTGCGGTGTCCGTGCTGGCGAGCGCCAGCATGGCCGCGGCGAAATTCGCCGTCGGCATCGCCATCGGAT CGCTGGCGCTGATCTCCGAGGCGCTGCACAGTTCGATCGATCTGGTCGCGACCATCATCACCTGGTTCGTGGTCCGGGTG TCCGACCGCCCGGCCGACGATGCCCATCACTACGGCCACGGCAAGATCGAAAGCCTGTCGGCGCTCGGCGTCATCGCATT GCTGTATGTCCTGGCGGGCGGCATTCTGGTCGAGGCCACAAGCCGGTTGCGCGAGGGCGCTCCGCCGCCGGCCTTCTCGC TGTGGGCCTTCGGTATTCTCGGCGTCGACATCCTGGTGAATTCCTGGCGCGCCTGGGCGTTGCATCGCACGGCGGTCGCG ACCAAGAGCCAGGCGCTCGCCGCCGACGCGCTGCACTTCGCCTCCGACGTGCTCGGCTCGTTCGCGGTGATCGCCGGACT CTCGCTGTCGGCGCTGGGCTTCGCCTGGGGCGACGCCGCCGCCGCGATCGGCGTCGCGGTGATGATCTCGATCCTCGGCC TGCGGCTCGGCCGCTCGACGATCCAGACCCTGCTCGACCGCGCGCCGGAGGGCGTCTCGGACAAGGCCCGCGACGTGATC AGCGCGGTGCCCGGCGTCGTCGGCATCGAACGGCTGCGCACCCGCATGGTCGGGCCGACGCATTTCATCGACGCGCTGGT CGAGGTGCCGCGCACCTACCCGATCGACCGCATCGACGAGATCAAGCGCCGCGCCGACGACGCGCTGAAGGGCGCTTTCG GCGATTCCGACCTCACCTTCACGGCGATCCCGGTCGCCCGCGACAACGAGACCGTGCGCGAGCGCATCATGGTGATCGCG CGCAATTCCGGCCTCGCCGTCCACCACGTCACCGTCCACGACCTCGGCTGCAAGATCACCGTCAGCATCGATCTCGAGGT CGACGGCGACATGCCGCTGATCGAGGCGCACGACATCGCCCACGAACTGGAGCGGCACATCCGCGACGATTTCGGCACCG ACGTCGAGGTCGACACCCATATCGAGCCGCTCGAGCCGGAAATGCCGCACGGCTACGAAGCCGCGCCGGAACGCGTCGAG GAAATTCGCGCGGCGCTGATCGGCTTCGCAAAGAACGGCGCGATCCACGACATCCACAGCGTCCGGGTCCGCGACACCGA GGCCGGCGAGATCGTCAACTTCCACTGCTACGCCGAGCCGTCGCTCAGCGTCATCGCGGTGCACGACCACGTCGACGAGA TCGAGCGCCATATGCGGCGCGCGTTCCCGAGCGTGAAGCGAGTCATCAGCCACGCCGAGCCGCCGAACGCGGACTGA
Upstream 100 bases:
>100_bases TCGGTAAGATCGTGGTGACGTTCTGAGCGGTTCCCGCAATCGCCACGACGCAGCCGCTTGAATAAGAACAATTTGCAATA ACGGCTGTCGCAAAATCGCG
Downstream 100 bases:
>100_bases TCGCCGCGCCTGCGACTCCTACGAGTCTCCGTTCTCGTTTCGGACTCGGCTCACGCACAAATGAGAGCGCGATTCATCTT TGGATAAGAAATTATCCGAT
Product: cation diffusion facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MAIRFGRLLCSGSGCYTAPMSNFASTKSRVAAVSVLASASMAAAKFAVGIAIGSLALISEALHSSIDLVATIITWFVVRV SDRPADDAHHYGHGKIESLSALGVIALLYVLAGGILVEATSRLREGAPPPAFSLWAFGILGVDILVNSWRAWALHRTAVA TKSQALAADALHFASDVLGSFAVIAGLSLSALGFAWGDAAAAIGVAVMISILGLRLGRSTIQTLLDRAPEGVSDKARDVI SAVPGVVGIERLRTRMVGPTHFIDALVEVPRTYPIDRIDEIKRRADDALKGAFGDSDLTFTAIPVARDNETVRERIMVIA RNSGLAVHHVTVHDLGCKITVSIDLEVDGDMPLIEAHDIAHELERHIRDDFGTDVEVDTHIEPLEPEMPHGYEAAPERVE EIRAALIGFAKNGAIHDIHSVRVRDTEAGEIVNFHCYAEPSLSVIAVHDHVDEIERHMRRAFPSVKRVISHAEPPNAD
Sequences:
>Translated_478_residues MAIRFGRLLCSGSGCYTAPMSNFASTKSRVAAVSVLASASMAAAKFAVGIAIGSLALISEALHSSIDLVATIITWFVVRV SDRPADDAHHYGHGKIESLSALGVIALLYVLAGGILVEATSRLREGAPPPAFSLWAFGILGVDILVNSWRAWALHRTAVA TKSQALAADALHFASDVLGSFAVIAGLSLSALGFAWGDAAAAIGVAVMISILGLRLGRSTIQTLLDRAPEGVSDKARDVI SAVPGVVGIERLRTRMVGPTHFIDALVEVPRTYPIDRIDEIKRRADDALKGAFGDSDLTFTAIPVARDNETVRERIMVIA RNSGLAVHHVTVHDLGCKITVSIDLEVDGDMPLIEAHDIAHELERHIRDDFGTDVEVDTHIEPLEPEMPHGYEAAPERVE EIRAALIGFAKNGAIHDIHSVRVRDTEAGEIVNFHCYAEPSLSVIAVHDHVDEIERHMRRAFPSVKRVISHAEPPNAD >Mature_477_residues AIRFGRLLCSGSGCYTAPMSNFASTKSRVAAVSVLASASMAAAKFAVGIAIGSLALISEALHSSIDLVATIITWFVVRVS DRPADDAHHYGHGKIESLSALGVIALLYVLAGGILVEATSRLREGAPPPAFSLWAFGILGVDILVNSWRAWALHRTAVAT KSQALAADALHFASDVLGSFAVIAGLSLSALGFAWGDAAAAIGVAVMISILGLRLGRSTIQTLLDRAPEGVSDKARDVIS AVPGVVGIERLRTRMVGPTHFIDALVEVPRTYPIDRIDEIKRRADDALKGAFGDSDLTFTAIPVARDNETVRERIMVIAR NSGLAVHHVTVHDLGCKITVSIDLEVDGDMPLIEAHDIAHELERHIRDDFGTDVEVDTHIEPLEPEMPHGYEAAPERVEE IRAALIGFAKNGAIHDIHSVRVRDTEAGEIVNFHCYAEPSLSVIAVHDHVDEIERHMRRAFPSVKRVISHAEPPNAD
Specific function: Cation-efflux transporter that may have a role in detoxification [H]
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. FieF subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=261, Percent_Identity=32.5670498084291, Blast_Score=124, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 51295; Mature: 51164
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRFGRLLCSGSGCYTAPMSNFASTKSRVAAVSVLASASMAAAKFAVGIAIGSLALISE CCEEECCCEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALHSSIDLVATIITWFVVRVSDRPADDAHHYGHGKIESLSALGVIALLYVLAGGILVEAT HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH SRLREGAPPPAFSLWAFGILGVDILVNSWRAWALHRTAVATKSQALAADALHFASDVLGS HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVIAGLSLSALGFAWGDAAAAIGVAVMISILGLRLGRSTIQTLLDRAPEGVSDKARDVI HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHH SAVPGVVGIERLRTRMVGPTHFIDALVEVPRTYPIDRIDEIKRRADDALKGAFGDSDLTF HHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE TAIPVARDNETVRERIMVIARNSGLAVHHVTVHDLGCKITVSIDLEVDGDMPLIEAHDIA EEEEECCCCHHHHHHEEEEECCCCEEEEEEEEEECCEEEEEEEEEEECCCCCCHHHHHHH HELERHIRDDFGTDVEVDTHIEPLEPEMPHGYEAAPERVEEIRAALIGFAKNGAIHDIHS HHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECHHE VRVRDTEAGEIVNFHCYAEPSLSVIAVHDHVDEIERHMRRAFPSVKRVISHAEPPNAD EEEECCCCCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AIRFGRLLCSGSGCYTAPMSNFASTKSRVAAVSVLASASMAAAKFAVGIAIGSLALISE CEEECCCEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALHSSIDLVATIITWFVVRVSDRPADDAHHYGHGKIESLSALGVIALLYVLAGGILVEAT HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH SRLREGAPPPAFSLWAFGILGVDILVNSWRAWALHRTAVATKSQALAADALHFASDVLGS HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVIAGLSLSALGFAWGDAAAAIGVAVMISILGLRLGRSTIQTLLDRAPEGVSDKARDVI HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHH SAVPGVVGIERLRTRMVGPTHFIDALVEVPRTYPIDRIDEIKRRADDALKGAFGDSDLTF HHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE TAIPVARDNETVRERIMVIARNSGLAVHHVTVHDLGCKITVSIDLEVDGDMPLIEAHDIA EEEEECCCCHHHHHHEEEEECCCCEEEEEEEEEECCEEEEEEEEEEECCCCCCHHHHHHH HELERHIRDDFGTDVEVDTHIEPLEPEMPHGYEAAPERVEEIRAALIGFAKNGAIHDIHS HHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECHHE VRVRDTEAGEIVNFHCYAEPSLSVIAVHDHVDEIERHMRRAFPSVKRVISHAEPPNAD EEEECCCCCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA