Definition | Rhodopseudomonas palustris HaA2, complete genome. |
---|---|
Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is qor [H]
Identifier: 86750545
GI number: 86750545
Start: 3932872
End: 3933840
Strand: Direct
Name: qor [H]
Synonym: RPB_3434
Alternate gene names: 86750545
Gene position: 3932872-3933840 (Clockwise)
Preceding gene: 86750544
Following gene: 86750546
Centisome position: 73.76
GC content: 68.32
Gene sequence:
>969_bases ATGAAGGCCTATGTTTACGGCGCCGATGGCGCCGCCATCACCGAGATCGACAAGCCGGCGCCGAAGGGGCCGCAGGTCCT GGTCCGGGTCCGCGCCTGCGGGCTCAATCGCGCCGACCTCGGAATGACCAAGGGCCACGCCCACGGCGCGGCCGGTGGCG TCGGCGCGGTGCTCGGCATGGAATGGGCCGGCGAGATCGAGGCGGTCGGCGACGAGGCCTATGGCTGCGAGGTCGGCCAG CGGGTGATGGGCTCCGGCACAGCCGCGTTCGGGGAATCCACCCTCGCCGATCACGGCCGGCTGTTTCCGATTCCGGACGG CATCGGCTTCGAGGAAGCCGCGACCCTGCCCGTCGCGCTCACCACGATGCACAACGCGCTGATCGCGGTCGGCAAGCTGC GCGCCGGCCAGGCCGTGCTGATCCAGGGCGCAAGCTCCGGCGTCGGGCTGATGGCAATGCAGATCGCGAAGTTGAAAGGC GCGAGACTGGTGATCGGGTCGTCGACCGACAAACACCGCCGCGACCGGCTGAGCGAATTCGGCGCCGATCTCGCGATCGA TTCGTCGGATGCGGGCTGGGTCGATCAGGTGCTCGAAGCCACCGGCGGCGCCGGCGTCGATCTGATCATCGACCAGATCT CCGGCAAGGTCGCCAACCAGAACCTCGCCGCGGCGCGCGTGCTCGGCCGCATCGTCAATGTCGGCCGGCTCGGCGGCACC CACGCCGATTTCAACTTCGACCTGCACGCGGCGCGCCGGATCGATTATGTCGGCGTCACCTTCCGCAGCCGCAGCATCGA GGAGATCCGCGAAATCTTCCGCCAGGTCCGCGGCGACATCTGGCCGGCGGTCGAATCCCGCAAGCTGCGCCTGCCGATCG ACCGCGTCTTCCCGTTCTCGGAGATCGGCGAGGCGTTCGCTCACATGGAAGCGAACCGTCACCTCGGTAAGATCGTGGTG ACGTTCTGA
Upstream 100 bases:
>100_bases ATCATTCGCGGCCGGCTCGAAACGATGCTATCGGGGGGCGCGCGTCAGGCTGCGGAATAGAAGCGGCGGCCCGCGCGGCT CTGAAACGGGAAGCGTTGAG
Downstream 100 bases:
>100_bases GCGGTTCCCGCAATCGCCACGACGCAGCCGCTTGAATAAGAACAATTTGCAATAACGGCTGTCGCAAAATCGCGATGGCG ATCCGCTTCGGCCGGCTTTT
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MKAYVYGADGAAITEIDKPAPKGPQVLVRVRACGLNRADLGMTKGHAHGAAGGVGAVLGMEWAGEIEAVGDEAYGCEVGQ RVMGSGTAAFGESTLADHGRLFPIPDGIGFEEAATLPVALTTMHNALIAVGKLRAGQAVLIQGASSGVGLMAMQIAKLKG ARLVIGSSTDKHRRDRLSEFGADLAIDSSDAGWVDQVLEATGGAGVDLIIDQISGKVANQNLAAARVLGRIVNVGRLGGT HADFNFDLHAARRIDYVGVTFRSRSIEEIREIFRQVRGDIWPAVESRKLRLPIDRVFPFSEIGEAFAHMEANRHLGKIVV TF
Sequences:
>Translated_322_residues MKAYVYGADGAAITEIDKPAPKGPQVLVRVRACGLNRADLGMTKGHAHGAAGGVGAVLGMEWAGEIEAVGDEAYGCEVGQ RVMGSGTAAFGESTLADHGRLFPIPDGIGFEEAATLPVALTTMHNALIAVGKLRAGQAVLIQGASSGVGLMAMQIAKLKG ARLVIGSSTDKHRRDRLSEFGADLAIDSSDAGWVDQVLEATGGAGVDLIIDQISGKVANQNLAAARVLGRIVNVGRLGGT HADFNFDLHAARRIDYVGVTFRSRSIEEIREIFRQVRGDIWPAVESRKLRLPIDRVFPFSEIGEAFAHMEANRHLGKIVV TF >Mature_322_residues MKAYVYGADGAAITEIDKPAPKGPQVLVRVRACGLNRADLGMTKGHAHGAAGGVGAVLGMEWAGEIEAVGDEAYGCEVGQ RVMGSGTAAFGESTLADHGRLFPIPDGIGFEEAATLPVALTTMHNALIAVGKLRAGQAVLIQGASSGVGLMAMQIAKLKG ARLVIGSSTDKHRRDRLSEFGADLAIDSSDAGWVDQVLEATGGAGVDLIIDQISGKVANQNLAAARVLGRIVNVGRLGGT HADFNFDLHAARRIDYVGVTFRSRSIEEIREIFRQVRGDIWPAVESRKLRLPIDRVFPFSEIGEAFAHMEANRHLGKIVV TF
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI22538446, Length=330, Percent_Identity=31.5151515151515, Blast_Score=139, Evalue=3e-33, Organism=Homo sapiens, GI22538444, Length=330, Percent_Identity=31.5151515151515, Blast_Score=139, Evalue=3e-33, Organism=Homo sapiens, GI194239674, Length=298, Percent_Identity=28.8590604026846, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI13236495, Length=298, Percent_Identity=28.8590604026846, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI24308257, Length=323, Percent_Identity=26.0061919504644, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI18379349, Length=312, Percent_Identity=26.9230769230769, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI41872631, Length=318, Percent_Identity=27.9874213836478, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI194239676, Length=186, Percent_Identity=31.7204301075269, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI28557745, Length=222, Percent_Identity=29.2792792792793, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI197927207, Length=187, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=6e-12, Organism=Escherichia coli, GI87082125, Length=365, Percent_Identity=25.7534246575342, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17507255, Length=223, Percent_Identity=30.4932735426009, Blast_Score=78, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6319520, Length=310, Percent_Identity=26.4516129032258, Blast_Score=94, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6323961, Length=337, Percent_Identity=26.1127596439169, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581345, Length=273, Percent_Identity=25.2747252747253, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI19920632, Length=272, Percent_Identity=25, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI221330659, Length=272, Percent_Identity=25, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI45550423, Length=150, Percent_Identity=32, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34031; Mature: 34031
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAYVYGADGAAITEIDKPAPKGPQVLVRVRACGLNRADLGMTKGHAHGAAGGVGAVLGM CCEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHCC EWAGEIEAVGDEAYGCEVGQRVMGSGTAAFGESTLADHGRLFPIPDGIGFEEAATLPVAL CCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCCHHHCCCCEEECCCCCCCCHHCCCCCHH TTMHNALIAVGKLRAGQAVLIQGASSGVGLMAMQIAKLKGARLVIGSSTDKHRRDRLSEF HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH GADLAIDSSDAGWVDQVLEATGGAGVDLIIDQISGKVANQNLAAARVLGRIVNVGRLGGT CCCEEECCCCCHHHHHHHHHCCCCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHHHCCCCC HADFNFDLHAARRIDYVGVTFRSRSIEEIREIFRQVRGDIWPAVESRKLRLPIDRVFPFS CCCCCEEEHHHHEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEECCHHHCCCHH EIGEAFAHMEANRHLGKIVVTF HHHHHHHHHHHCCCCCEEEEEC >Mature Secondary Structure MKAYVYGADGAAITEIDKPAPKGPQVLVRVRACGLNRADLGMTKGHAHGAAGGVGAVLGM CCEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHCC EWAGEIEAVGDEAYGCEVGQRVMGSGTAAFGESTLADHGRLFPIPDGIGFEEAATLPVAL CCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCCHHHCCCCEEECCCCCCCCHHCCCCCHH TTMHNALIAVGKLRAGQAVLIQGASSGVGLMAMQIAKLKGARLVIGSSTDKHRRDRLSEF HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH GADLAIDSSDAGWVDQVLEATGGAGVDLIIDQISGKVANQNLAAARVLGRIVNVGRLGGT CCCEEECCCCCHHHHHHHHHCCCCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHHHCCCCC HADFNFDLHAARRIDYVGVTFRSRSIEEIREIFRQVRGDIWPAVESRKLRLPIDRVFPFS CCCCCEEEHHHHEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEECCHHHCCCHH EIGEAFAHMEANRHLGKIVVTF HHHHHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]