Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is qor [H]

Identifier: 86750545

GI number: 86750545

Start: 3932872

End: 3933840

Strand: Direct

Name: qor [H]

Synonym: RPB_3434

Alternate gene names: 86750545

Gene position: 3932872-3933840 (Clockwise)

Preceding gene: 86750544

Following gene: 86750546

Centisome position: 73.76

GC content: 68.32

Gene sequence:

>969_bases
ATGAAGGCCTATGTTTACGGCGCCGATGGCGCCGCCATCACCGAGATCGACAAGCCGGCGCCGAAGGGGCCGCAGGTCCT
GGTCCGGGTCCGCGCCTGCGGGCTCAATCGCGCCGACCTCGGAATGACCAAGGGCCACGCCCACGGCGCGGCCGGTGGCG
TCGGCGCGGTGCTCGGCATGGAATGGGCCGGCGAGATCGAGGCGGTCGGCGACGAGGCCTATGGCTGCGAGGTCGGCCAG
CGGGTGATGGGCTCCGGCACAGCCGCGTTCGGGGAATCCACCCTCGCCGATCACGGCCGGCTGTTTCCGATTCCGGACGG
CATCGGCTTCGAGGAAGCCGCGACCCTGCCCGTCGCGCTCACCACGATGCACAACGCGCTGATCGCGGTCGGCAAGCTGC
GCGCCGGCCAGGCCGTGCTGATCCAGGGCGCAAGCTCCGGCGTCGGGCTGATGGCAATGCAGATCGCGAAGTTGAAAGGC
GCGAGACTGGTGATCGGGTCGTCGACCGACAAACACCGCCGCGACCGGCTGAGCGAATTCGGCGCCGATCTCGCGATCGA
TTCGTCGGATGCGGGCTGGGTCGATCAGGTGCTCGAAGCCACCGGCGGCGCCGGCGTCGATCTGATCATCGACCAGATCT
CCGGCAAGGTCGCCAACCAGAACCTCGCCGCGGCGCGCGTGCTCGGCCGCATCGTCAATGTCGGCCGGCTCGGCGGCACC
CACGCCGATTTCAACTTCGACCTGCACGCGGCGCGCCGGATCGATTATGTCGGCGTCACCTTCCGCAGCCGCAGCATCGA
GGAGATCCGCGAAATCTTCCGCCAGGTCCGCGGCGACATCTGGCCGGCGGTCGAATCCCGCAAGCTGCGCCTGCCGATCG
ACCGCGTCTTCCCGTTCTCGGAGATCGGCGAGGCGTTCGCTCACATGGAAGCGAACCGTCACCTCGGTAAGATCGTGGTG
ACGTTCTGA

Upstream 100 bases:

>100_bases
ATCATTCGCGGCCGGCTCGAAACGATGCTATCGGGGGGCGCGCGTCAGGCTGCGGAATAGAAGCGGCGGCCCGCGCGGCT
CTGAAACGGGAAGCGTTGAG

Downstream 100 bases:

>100_bases
GCGGTTCCCGCAATCGCCACGACGCAGCCGCTTGAATAAGAACAATTTGCAATAACGGCTGTCGCAAAATCGCGATGGCG
ATCCGCTTCGGCCGGCTTTT

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NADPH:quinone reductase [H]

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MKAYVYGADGAAITEIDKPAPKGPQVLVRVRACGLNRADLGMTKGHAHGAAGGVGAVLGMEWAGEIEAVGDEAYGCEVGQ
RVMGSGTAAFGESTLADHGRLFPIPDGIGFEEAATLPVALTTMHNALIAVGKLRAGQAVLIQGASSGVGLMAMQIAKLKG
ARLVIGSSTDKHRRDRLSEFGADLAIDSSDAGWVDQVLEATGGAGVDLIIDQISGKVANQNLAAARVLGRIVNVGRLGGT
HADFNFDLHAARRIDYVGVTFRSRSIEEIREIFRQVRGDIWPAVESRKLRLPIDRVFPFSEIGEAFAHMEANRHLGKIVV
TF

Sequences:

>Translated_322_residues
MKAYVYGADGAAITEIDKPAPKGPQVLVRVRACGLNRADLGMTKGHAHGAAGGVGAVLGMEWAGEIEAVGDEAYGCEVGQ
RVMGSGTAAFGESTLADHGRLFPIPDGIGFEEAATLPVALTTMHNALIAVGKLRAGQAVLIQGASSGVGLMAMQIAKLKG
ARLVIGSSTDKHRRDRLSEFGADLAIDSSDAGWVDQVLEATGGAGVDLIIDQISGKVANQNLAAARVLGRIVNVGRLGGT
HADFNFDLHAARRIDYVGVTFRSRSIEEIREIFRQVRGDIWPAVESRKLRLPIDRVFPFSEIGEAFAHMEANRHLGKIVV
TF
>Mature_322_residues
MKAYVYGADGAAITEIDKPAPKGPQVLVRVRACGLNRADLGMTKGHAHGAAGGVGAVLGMEWAGEIEAVGDEAYGCEVGQ
RVMGSGTAAFGESTLADHGRLFPIPDGIGFEEAATLPVALTTMHNALIAVGKLRAGQAVLIQGASSGVGLMAMQIAKLKG
ARLVIGSSTDKHRRDRLSEFGADLAIDSSDAGWVDQVLEATGGAGVDLIIDQISGKVANQNLAAARVLGRIVNVGRLGGT
HADFNFDLHAARRIDYVGVTFRSRSIEEIREIFRQVRGDIWPAVESRKLRLPIDRVFPFSEIGEAFAHMEANRHLGKIVV
TF

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Homo sapiens, GI22538446, Length=330, Percent_Identity=31.5151515151515, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI22538444, Length=330, Percent_Identity=31.5151515151515, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI194239674, Length=298, Percent_Identity=28.8590604026846, Blast_Score=119, Evalue=2e-27,
Organism=Homo sapiens, GI13236495, Length=298, Percent_Identity=28.8590604026846, Blast_Score=119, Evalue=2e-27,
Organism=Homo sapiens, GI24308257, Length=323, Percent_Identity=26.0061919504644, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI18379349, Length=312, Percent_Identity=26.9230769230769, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI41872631, Length=318, Percent_Identity=27.9874213836478, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI194239676, Length=186, Percent_Identity=31.7204301075269, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI28557745, Length=222, Percent_Identity=29.2792792792793, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI197927207, Length=187, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI87082125, Length=365, Percent_Identity=25.7534246575342, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17507255, Length=223, Percent_Identity=30.4932735426009, Blast_Score=78, Evalue=7e-15,
Organism=Saccharomyces cerevisiae, GI6319520, Length=310, Percent_Identity=26.4516129032258, Blast_Score=94, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6323961, Length=337, Percent_Identity=26.1127596439169, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24581345, Length=273, Percent_Identity=25.2747252747253, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI19920632, Length=272, Percent_Identity=25, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI221330659, Length=272, Percent_Identity=25, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI45550423, Length=150, Percent_Identity=32, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR002364 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: =1.6.5.5 [H]

Molecular weight: Translated: 34031; Mature: 34031

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAYVYGADGAAITEIDKPAPKGPQVLVRVRACGLNRADLGMTKGHAHGAAGGVGAVLGM
CCEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHCC
EWAGEIEAVGDEAYGCEVGQRVMGSGTAAFGESTLADHGRLFPIPDGIGFEEAATLPVAL
CCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCCHHHCCCCEEECCCCCCCCHHCCCCCHH
TTMHNALIAVGKLRAGQAVLIQGASSGVGLMAMQIAKLKGARLVIGSSTDKHRRDRLSEF
HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
GADLAIDSSDAGWVDQVLEATGGAGVDLIIDQISGKVANQNLAAARVLGRIVNVGRLGGT
CCCEEECCCCCHHHHHHHHHCCCCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHHHCCCCC
HADFNFDLHAARRIDYVGVTFRSRSIEEIREIFRQVRGDIWPAVESRKLRLPIDRVFPFS
CCCCCEEEHHHHEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEECCHHHCCCHH
EIGEAFAHMEANRHLGKIVVTF
HHHHHHHHHHHCCCCCEEEEEC
>Mature Secondary Structure
MKAYVYGADGAAITEIDKPAPKGPQVLVRVRACGLNRADLGMTKGHAHGAAGGVGAVLGM
CCEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHCC
EWAGEIEAVGDEAYGCEVGQRVMGSGTAAFGESTLADHGRLFPIPDGIGFEEAATLPVAL
CCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCCHHHCCCCEEECCCCCCCCHHCCCCCHH
TTMHNALIAVGKLRAGQAVLIQGASSGVGLMAMQIAKLKGARLVIGSSTDKHRRDRLSEF
HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
GADLAIDSSDAGWVDQVLEATGGAGVDLIIDQISGKVANQNLAAARVLGRIVNVGRLGGT
CCCEEECCCCCHHHHHHHHHCCCCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHHHCCCCC
HADFNFDLHAARRIDYVGVTFRSRSIEEIREIFRQVRGDIWPAVESRKLRLPIDRVFPFS
CCCCCEEEHHHHEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEECCHHHCCCHH
EIGEAFAHMEANRHLGKIVVTF
HHHHHHHHHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]