Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86750544
Identifier: 86750544
GI number: 86750544
Start: 3931836
End: 3932831
Strand: Direct
Name: 86750544
Synonym: RPB_3433
Alternate gene names: NA
Gene position: 3931836-3932831 (Clockwise)
Preceding gene: 86750543
Following gene: 86750545
Centisome position: 73.75
GC content: 66.16
Gene sequence:
>996_bases ATGATCAAGACGCGATTCACCGAAACCTTCGGCATCGAGCATCCGATCGTCCAGGGCGGGATGCAATGGGTCGGCCGTGC CGAACTGGTCGCGGCGGTCGCCAATGCCGGCGCGCTCGGCATGATCACCGCGCTGACGCAGCCGACGCCGGAAGACCTCA CCAAGGAAATCGCGCGCTGCCGTGAGCTCACCGACAAGCCGTTCGGCGTGAACCTGACGATCCTGCCGGCGATCAAGCCG CCGCCTTATGCGGAATATCGCCAGGCGATCATCGAGAGCGGCGTGCGGATCGTCGAAACCGCGGGCAACAAGCCGCAGGA GCACGTCGAGGAATTCAAGAAGCACGGCGTCAAGGTGCTGCACAAATGCACCAGCGTCCGCCACGCGCTCTCGGCCGAGC GGATGGGCGTCGACGGCATTTCGATCGACGGCTTCGAATGCGCCGGCCATCCGGGCGAGGACGACACCCCCGGCCTGATC CTGATCCCGGCCGCCGCCGACAAGATCAAAATTCCGATGATCGCCTCCGGCGGCTTCGCCGACGGCCGCGGCCTGGTGGC GGCGCTGTCGCTCGGCGCCGACGGCATCAACATGGGCACGCGCTTCATGTGCACCAAGGAGAGCCCGATCCACGAAGCGG TGAAGCAGAAGATCGTCGACAATGACGAGCGCGCGACCGACCTGATCTTCCGGACCTTGCGCAACACCTCGCGCGTCGCG AAGAACGCGATCAGCCAGCAGGTCCTCGAACTGGAAAAGCAGGGCGCGACCTTCGAGCAGGTCAAGGACCTGGTTGCGGG CGCGCGCGGCAAGATGGTCTATGTCACCGGCGACACCGACGAAGGCGTGTGGTCGGCCGGCCAGGTGCAGGGGCTGATCC ACGACATCCCGAGCTGCGCCGACCTGGTGTCGCGGATCGTGCGCGACGCCGAGGCGATCATTCGCGGCCGGCTCGAAACG ATGCTATCGGGGGGCGCGCGTCAGGCTGCGGAATAG
Upstream 100 bases:
>100_bases CCCCTTCCCCGCGCATTGGACATTTCGCTGCCGGTTCGGCAATCTGCCGCCGAACCACAACAGCAACAGGCGCGCGAGGC GCCGGGTCCAGGGGCACATC
Downstream 100 bases:
>100_bases AAGCGGCGGCCCGCGCGGCTCTGAAACGGGAAGCGTTGAGATGAAGGCCTATGTTTACGGCGCCGATGGCGCCGCCATCA CCGAGATCGACAAGCCGGCG
Product: 2-nitropropane dioxygenase, NPD
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MIKTRFTETFGIEHPIVQGGMQWVGRAELVAAVANAGALGMITALTQPTPEDLTKEIARCRELTDKPFGVNLTILPAIKP PPYAEYRQAIIESGVRIVETAGNKPQEHVEEFKKHGVKVLHKCTSVRHALSAERMGVDGISIDGFECAGHPGEDDTPGLI LIPAAADKIKIPMIASGGFADGRGLVAALSLGADGINMGTRFMCTKESPIHEAVKQKIVDNDERATDLIFRTLRNTSRVA KNAISQQVLELEKQGATFEQVKDLVAGARGKMVYVTGDTDEGVWSAGQVQGLIHDIPSCADLVSRIVRDAEAIIRGRLET MLSGGARQAAE
Sequences:
>Translated_331_residues MIKTRFTETFGIEHPIVQGGMQWVGRAELVAAVANAGALGMITALTQPTPEDLTKEIARCRELTDKPFGVNLTILPAIKP PPYAEYRQAIIESGVRIVETAGNKPQEHVEEFKKHGVKVLHKCTSVRHALSAERMGVDGISIDGFECAGHPGEDDTPGLI LIPAAADKIKIPMIASGGFADGRGLVAALSLGADGINMGTRFMCTKESPIHEAVKQKIVDNDERATDLIFRTLRNTSRVA KNAISQQVLELEKQGATFEQVKDLVAGARGKMVYVTGDTDEGVWSAGQVQGLIHDIPSCADLVSRIVRDAEAIIRGRLET MLSGGARQAAE >Mature_331_residues MIKTRFTETFGIEHPIVQGGMQWVGRAELVAAVANAGALGMITALTQPTPEDLTKEIARCRELTDKPFGVNLTILPAIKP PPYAEYRQAIIESGVRIVETAGNKPQEHVEEFKKHGVKVLHKCTSVRHALSAERMGVDGISIDGFECAGHPGEDDTPGLI LIPAAADKIKIPMIASGGFADGRGLVAALSLGADGINMGTRFMCTKESPIHEAVKQKIVDNDERATDLIFRTLRNTSRVA KNAISQQVLELEKQGATFEQVKDLVAGARGKMVYVTGDTDEGVWSAGQVQGLIHDIPSCADLVSRIVRDAEAIIRGRLET MLSGGARQAAE
Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 35554; Mature: 35554
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKTRFTETFGIEHPIVQGGMQWVGRAELVAAVANAGALGMITALTQPTPEDLTKEIARC CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHH RELTDKPFGVNLTILPAIKPPPYAEYRQAIIESGVRIVETAGNKPQEHVEEFKKHGVKVL HHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHH HKCTSVRHALSAERMGVDGISIDGFECAGHPGEDDTPGLILIPAAADKIKIPMIASGGFA HHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCC DGRGLVAALSLGADGINMGTRFMCTKESPIHEAVKQKIVDNDERATDLIFRTLRNTSRVA CCCHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH KNAISQQVLELEKQGATFEQVKDLVAGARGKMVYVTGDTDEGVWSAGQVQGLIHDIPSCA HHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHH DLVSRIVRDAEAIIRGRLETMLSGGARQAAE HHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC >Mature Secondary Structure MIKTRFTETFGIEHPIVQGGMQWVGRAELVAAVANAGALGMITALTQPTPEDLTKEIARC CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHH RELTDKPFGVNLTILPAIKPPPYAEYRQAIIESGVRIVETAGNKPQEHVEEFKKHGVKVL HHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHH HKCTSVRHALSAERMGVDGISIDGFECAGHPGEDDTPGLILIPAAADKIKIPMIASGGFA HHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCC DGRGLVAALSLGADGINMGTRFMCTKESPIHEAVKQKIVDNDERATDLIFRTLRNTSRVA CCCHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH KNAISQQVLELEKQGATFEQVKDLVAGARGKMVYVTGDTDEGVWSAGQVQGLIHDIPSCA HHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHH DLVSRIVRDAEAIIRGRLETMLSGGARQAAE HHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]