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The map label for this gene is 86750281

Identifier: 86750281

GI number: 86750281

Start: 3627708

End: 3628670

Strand: Direct

Name: 86750281

Synonym: RPB_3170

Alternate gene names: NA

Gene position: 3627708-3628670 (Clockwise)

Preceding gene: 86750280

Following gene: 86750282

Centisome position: 68.04

GC content: 65.84

Gene sequence:

>963_bases
ATGGGATTTCGCGGATTTTGCGCGGCACTGATTGCCGTTCCGACAATCGTCGTCAGTCTGGATGGAGCCGCGGCACAGAC
GCCTGTCGACCGGATCGACGCGGCTCTGCAGAACATCACCAGTATTAGCCGCACGGGTCGCGTCGGCTACGCCACGGCCT
GGGACGGCAACAAATACGTCCAGTGCCGCCGACTGCAGACGCGAGAGATGCGCTGCGAAGCCGCCGGCATCGTGCTGCAG
CCGTCGCTCGCCCGCATCCTCAACGCCGAGCGGCAGACCCGCCTCACCGCGCTCGGCTGGGTGCTCGATCCGGCCTTCGG
CAACTACGTCCGGCAATTCCCCGCCGACGCGCCGACCACGGAGATCGCCGGCCAGGTGCTCAAGGCTCTGGCGGAAGCCT
ATGCAGCCAACACCGCCGACCTCGAAATCTCGACCGCTTGGGTGGTCGATATGCCCTGCCCGCCCCGCAACGGCCCGTCG
CAGAATCTCGCCGGCCTGATCAACGATGCGAAAGCGATGTTGCCCACCGCGGTGATCGCCTGCTCCTACAAGGCGCCGGA
TCCGGCGCAGAAGGCGGACACGGTCCAGGCGCTGATCGCCTTGTACGGTCCGAGCGTGACCGCGGAAATCCAGCGCCTGC
GCATCAACGCGACACGCAAGGTCCATGTCGTGTTCGACAGCGACATCGGCTACATCCAGTGCATGCCGGAAATTCCGCCC
GTCGCCTTCTATTGCGAGGCGCAATCTGCCGAGAGCTGGGCGGCGCTGAGCGCAGTGCTCACCCCGGACCGGACCGCCCG
ACTGACCGCGGCCGGCTACGCCGAGCCCGGTCGCGCGCCGAACTACAGCAAGAGCTACCCGATGACGCTGAGCGATGCGG
CGATCGCGCACGAAATCCTTTCGCTGCTGCACGACGTCTACGGCTACACCGGCGCGACCAAACTGACGATCATGACTGAA
TGA

Upstream 100 bases:

>100_bases
CTGGGGGTGAGGACAAGCGGTATCAACCTCAGGTTGACGATCTTGTTCTTATAATGTTCCATCGCCGCCAATTGAGCCCG
TTCGCTGCGTGGGGCGTTCG

Downstream 100 bases:

>100_bases
CGGGCTCTTCGTCGCCAGAACCCGCGCCGCCCGATCGCTGACCACAGCGCGTGCATCGCACAACTACGCATGACCACAAC
TTCAACATCACGCCGCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MGFRGFCAALIAVPTIVVSLDGAAAQTPVDRIDAALQNITSISRTGRVGYATAWDGNKYVQCRRLQTREMRCEAAGIVLQ
PSLARILNAERQTRLTALGWVLDPAFGNYVRQFPADAPTTEIAGQVLKALAEAYAANTADLEISTAWVVDMPCPPRNGPS
QNLAGLINDAKAMLPTAVIACSYKAPDPAQKADTVQALIALYGPSVTAEIQRLRINATRKVHVVFDSDIGYIQCMPEIPP
VAFYCEAQSAESWAALSAVLTPDRTARLTAAGYAEPGRAPNYSKSYPMTLSDAAIAHEILSLLHDVYGYTGATKLTIMTE

Sequences:

>Translated_320_residues
MGFRGFCAALIAVPTIVVSLDGAAAQTPVDRIDAALQNITSISRTGRVGYATAWDGNKYVQCRRLQTREMRCEAAGIVLQ
PSLARILNAERQTRLTALGWVLDPAFGNYVRQFPADAPTTEIAGQVLKALAEAYAANTADLEISTAWVVDMPCPPRNGPS
QNLAGLINDAKAMLPTAVIACSYKAPDPAQKADTVQALIALYGPSVTAEIQRLRINATRKVHVVFDSDIGYIQCMPEIPP
VAFYCEAQSAESWAALSAVLTPDRTARLTAAGYAEPGRAPNYSKSYPMTLSDAAIAHEILSLLHDVYGYTGATKLTIMTE
>Mature_319_residues
GFRGFCAALIAVPTIVVSLDGAAAQTPVDRIDAALQNITSISRTGRVGYATAWDGNKYVQCRRLQTREMRCEAAGIVLQP
SLARILNAERQTRLTALGWVLDPAFGNYVRQFPADAPTTEIAGQVLKALAEAYAANTADLEISTAWVVDMPCPPRNGPSQ
NLAGLINDAKAMLPTAVIACSYKAPDPAQKADTVQALIALYGPSVTAEIQRLRINATRKVHVVFDSDIGYIQCMPEIPPV
AFYCEAQSAESWAALSAVLTPDRTARLTAAGYAEPGRAPNYSKSYPMTLSDAAIAHEILSLLHDVYGYTGATKLTIMTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34321; Mature: 34189

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFRGFCAALIAVPTIVVSLDGAAAQTPVDRIDAALQNITSISRTGRVGYATAWDGNKYV
CCHHHHHHHHHHHHHHEEEECCCHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEE
QCRRLQTREMRCEAAGIVLQPSLARILNAERQTRLTALGWVLDPAFGNYVRQFPADAPTT
EEEHHHHHHHHHHHCCEEECCHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHH
EIAGQVLKALAEAYAANTADLEISTAWVVDMPCPPRNGPSQNLAGLINDAKAMLPTAVIA
HHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEE
CSYKAPDPAQKADTVQALIALYGPSVTAEIQRLRINATRKVHVVFDSDIGYIQCMPEIPP
EECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHEEECCCEEEEEEEECCCCEEEECCCCCC
VAFYCEAQSAESWAALSAVLTPDRTARLTAAGYAEPGRAPNYSKSYPMTLSDAAIAHEIL
EEEEEECCCCCHHHHHHHEECCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
SLLHDVYGYTGATKLTIMTE
HHHHHHHCCCCCEEEEEEEC
>Mature Secondary Structure 
GFRGFCAALIAVPTIVVSLDGAAAQTPVDRIDAALQNITSISRTGRVGYATAWDGNKYV
CHHHHHHHHHHHHHHEEEECCCHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEE
QCRRLQTREMRCEAAGIVLQPSLARILNAERQTRLTALGWVLDPAFGNYVRQFPADAPTT
EEEHHHHHHHHHHHCCEEECCHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHH
EIAGQVLKALAEAYAANTADLEISTAWVVDMPCPPRNGPSQNLAGLINDAKAMLPTAVIA
HHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEE
CSYKAPDPAQKADTVQALIALYGPSVTAEIQRLRINATRKVHVVFDSDIGYIQCMPEIPP
EECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHEEECCCEEEEEEEECCCCEEEECCCCCC
VAFYCEAQSAESWAALSAVLTPDRTARLTAAGYAEPGRAPNYSKSYPMTLSDAAIAHEIL
EEEEEECCCCCHHHHHHHEECCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
SLLHDVYGYTGATKLTIMTE
HHHHHHHCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA