| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is pyk1 [H]
Identifier: 86750280
GI number: 86750280
Start: 3626139
End: 3627617
Strand: Direct
Name: pyk1 [H]
Synonym: RPB_3169
Alternate gene names: 86750280
Gene position: 3626139-3627617 (Clockwise)
Preceding gene: 86750274
Following gene: 86750281
Centisome position: 68.01
GC content: 69.24
Gene sequence:
>1479_bases ATGCCGACCGAAGTCGCCCGCCTGAAGCAGAAACTCGACCGGCTGATCGCCGAGATCGAGGCCGACAGCCGGCCGCGCGT GGCGGCCTGGGGCGACCGGATCGAACGCCCCGGCTTTGCCGCCAGCGCCGGCAACCTGGCGCATTATCTAGCGCTGCGCC GGCACGATCTGCGACCGCTGCAGCGCGCGCTGATGACGCTCGGACTGTCGTCGCTGGGGCGGCTGGAAAGCCGCGTGATG CCGACGCTGGTCGCCGTGCGTGCGACCCTGGCGGCGTTGTGCGGCGAGCCGGAGGCGCTGCGGCCGTCGCCGCGGCAATT CTTCGCGGGCGAGCACGCCCTGGCCGAGCGCAGCGAGGAATTGTTCGGCCTGCCGTCGAGCGGCCGCGCCACCGCGCTGC TGGTGACCTGCCCGAGCGAGGCCGCCGACGATCCCTCGTTCATGCTGCGGCTGGCGGAGCGCAAGGTCGAGGCGGTGCGG ATCAACTGCGCCCACGACGATGCCGATGCGTGGCAGCGCATGATCAATCATCTGCATGTCGCCGAGGAAGCCACCGGCCA CCGCATGAAAGTGCTGATGGACATCGCCGGCCCGAAGATCCGCACCGGCGCCGCGCGCGCACCCGAAGGCCGCGAACGTA TCCTCACCGGCGACCTGATCGCGATCGTCGCCGCCGGCGCCCTGCACCGCATCGATCTCGCCGACGATCACTTCGCGGTG GAATGCACCCTGAGCGACCCGCTGATCAACAGCGCCGTCGGCGCGCGGGTGTTCGTCGACGACGGCAAGCTGTGCATCCG CATCGAGCGCAAGACGCCGTGGGGCCTGGTCGGACGTGTCACCTCGACCTCCGACAAGGGCCTGCGGCTGAAGCCCGAGA AGGGCCTGAACTTTCCGGACACGCTGCTCGATATCCCGGCCCTGACCGCCAAGGACCGCACCGACCTCGATTTCGTCGCC GAGCATGCCGACGGCATCGAGTTCTCGTTCGTGCAATCGGTCGCCGACGTCGAGACGCTGCAGACCGCACTGGCCGAGCG CCGCCCCGACGACTGGCGCAAGCTGTCGCTGGTGTTGAAGATCGAAACGCCCGAAGCGGTCGCCAACCTGCCCGACATTC TGGTGCAGGCAGCGGGGCAGCAGCCGACCGCGGTGATGATCGCGCGCGGCGACCTCGCGGTGGAGATCGGCTTCGCCCGG CTCGCCGAGATGCAGGAAGAGATTCTGTGGCTCGGCGAGGCCGCGCACATCCCGGTGATCTGGGCGACGCAGGTGCTGGA GCAACTCGTCAAGAAGGGCACGCCGTCGCGCGGCGAGATGACCGACGCCGCGATGGCGTCGCGCGCCGAATGCGTGATGC TCAACAAGGGCCCCTATCTGTTCAAGGCGATCACCGAGCTCGACACCCTGCTCGGCCGGATGGCCGATCACCAGCACAAG AAGACGCCGCAGCTCCGCAGGCTGCGGAGCTGGGGGTGA
Upstream 100 bases:
>100_bases CCGGTGACGACAACTCTGTCACAGGAGTTACATCGACGGCCCCTAGACGAACAGATTGGCGGTCGATGGTTCCACCGCCC GCGATTCAAGAGCCCCCGCC
Downstream 100 bases:
>100_bases GGACAAGCGGTATCAACCTCAGGTTGACGATCTTGTTCTTATAATGTTCCATCGCCGCCAATTGAGCCCGTTCGCTGCGT GGGGCGTTCGATGGGATTTC
Product: pyruvate kinase
Products: NA
Alternate protein names: PK 1 [H]
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MPTEVARLKQKLDRLIAEIEADSRPRVAAWGDRIERPGFAASAGNLAHYLALRRHDLRPLQRALMTLGLSSLGRLESRVM PTLVAVRATLAALCGEPEALRPSPRQFFAGEHALAERSEELFGLPSSGRATALLVTCPSEAADDPSFMLRLAERKVEAVR INCAHDDADAWQRMINHLHVAEEATGHRMKVLMDIAGPKIRTGAARAPEGRERILTGDLIAIVAAGALHRIDLADDHFAV ECTLSDPLINSAVGARVFVDDGKLCIRIERKTPWGLVGRVTSTSDKGLRLKPEKGLNFPDTLLDIPALTAKDRTDLDFVA EHADGIEFSFVQSVADVETLQTALAERRPDDWRKLSLVLKIETPEAVANLPDILVQAAGQQPTAVMIARGDLAVEIGFAR LAEMQEEILWLGEAAHIPVIWATQVLEQLVKKGTPSRGEMTDAAMASRAECVMLNKGPYLFKAITELDTLLGRMADHQHK KTPQLRRLRSWG
Sequences:
>Translated_492_residues MPTEVARLKQKLDRLIAEIEADSRPRVAAWGDRIERPGFAASAGNLAHYLALRRHDLRPLQRALMTLGLSSLGRLESRVM PTLVAVRATLAALCGEPEALRPSPRQFFAGEHALAERSEELFGLPSSGRATALLVTCPSEAADDPSFMLRLAERKVEAVR INCAHDDADAWQRMINHLHVAEEATGHRMKVLMDIAGPKIRTGAARAPEGRERILTGDLIAIVAAGALHRIDLADDHFAV ECTLSDPLINSAVGARVFVDDGKLCIRIERKTPWGLVGRVTSTSDKGLRLKPEKGLNFPDTLLDIPALTAKDRTDLDFVA EHADGIEFSFVQSVADVETLQTALAERRPDDWRKLSLVLKIETPEAVANLPDILVQAAGQQPTAVMIARGDLAVEIGFAR LAEMQEEILWLGEAAHIPVIWATQVLEQLVKKGTPSRGEMTDAAMASRAECVMLNKGPYLFKAITELDTLLGRMADHQHK KTPQLRRLRSWG >Mature_491_residues PTEVARLKQKLDRLIAEIEADSRPRVAAWGDRIERPGFAASAGNLAHYLALRRHDLRPLQRALMTLGLSSLGRLESRVMP TLVAVRATLAALCGEPEALRPSPRQFFAGEHALAERSEELFGLPSSGRATALLVTCPSEAADDPSFMLRLAERKVEAVRI NCAHDDADAWQRMINHLHVAEEATGHRMKVLMDIAGPKIRTGAARAPEGRERILTGDLIAIVAAGALHRIDLADDHFAVE CTLSDPLINSAVGARVFVDDGKLCIRIERKTPWGLVGRVTSTSDKGLRLKPEKGLNFPDTLLDIPALTAKDRTDLDFVAE HADGIEFSFVQSVADVETLQTALAERRPDDWRKLSLVLKIETPEAVANLPDILVQAAGQQPTAVMIARGDLAVEIGFARL AEMQEEILWLGEAAHIPVIWATQVLEQLVKKGTPSRGEMTDAAMASRAECVMLNKGPYLFKAITELDTLLGRMADHQHKK TPQLRRLRSWG
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286418, Length=387, Percent_Identity=27.6485788113695, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI33286422, Length=372, Percent_Identity=27.9569892473118, Blast_Score=122, Evalue=9e-28, Organism=Homo sapiens, GI33286420, Length=372, Percent_Identity=27.9569892473118, Blast_Score=122, Evalue=9e-28, Organism=Homo sapiens, GI32967597, Length=354, Percent_Identity=27.683615819209, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI10835121, Length=354, Percent_Identity=27.683615819209, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI310128732, Length=313, Percent_Identity=25.5591054313099, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI310128730, Length=313, Percent_Identity=25.5591054313099, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI310128736, Length=257, Percent_Identity=24.5136186770428, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI310128734, Length=257, Percent_Identity=24.5136186770428, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI310128738, Length=222, Percent_Identity=26.5765765765766, Blast_Score=70, Evalue=5e-12, Organism=Escherichia coli, GI1787965, Length=342, Percent_Identity=26.9005847953216, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1788160, Length=331, Percent_Identity=25.9818731117825, Blast_Score=69, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17544584, Length=370, Percent_Identity=27.027027027027, Blast_Score=118, Evalue=8e-27, Organism=Caenorhabditis elegans, GI17506829, Length=365, Percent_Identity=28.7671232876712, Blast_Score=113, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71984413, Length=365, Percent_Identity=28.7671232876712, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17506831, Length=365, Percent_Identity=28.7671232876712, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI71984406, Length=365, Percent_Identity=28.7671232876712, Blast_Score=112, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6319279, Length=355, Percent_Identity=28.169014084507, Blast_Score=125, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6324923, Length=360, Percent_Identity=28.6111111111111, Blast_Score=111, Evalue=2e-25, Organism=Drosophila melanogaster, GI28571814, Length=289, Percent_Identity=30.4498269896194, Blast_Score=111, Evalue=9e-25, Organism=Drosophila melanogaster, GI24648964, Length=289, Percent_Identity=30.4498269896194, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI24648966, Length=325, Percent_Identity=28, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI24581235, Length=356, Percent_Identity=25.8426966292135, Blast_Score=91, Evalue=1e-18,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 54006; Mature: 53875
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTEVARLKQKLDRLIAEIEADSRPRVAAWGDRIERPGFAASAGNLAHYLALRRHDLRPL CCHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHH QRALMTLGLSSLGRLESRVMPTLVAVRATLAALCGEPEALRPSPRQFFAGEHALAERSEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHH LFGLPSSGRATALLVTCPSEAADDPSFMLRLAERKVEAVRINCAHDDADAWQRMINHLHV HCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHH AEEATGHRMKVLMDIAGPKIRTGAARAPEGRERILTGDLIAIVAAGALHRIDLADDHFAV HHHCCCCEEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCHHHEEECCCCCEEE ECTLSDPLINSAVGARVFVDDGKLCIRIERKTPWGLVGRVTSTSDKGLRLKPEKGLNFPD EEEECCCHHHHHCCCEEEEECCEEEEEEECCCCCCEEEEEECCCCCCEEECCCCCCCCCH TLLDIPALTAKDRTDLDFVAEHADGIEFSFVQSVADVETLQTALAERRPDDWRKLSLVLK HHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE IETPEAVANLPDILVQAAGQQPTAVMIARGDLAVEIGFARLAEMQEEILWLGEAAHIPVI EECCHHHHCCHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCH WATQVLEQLVKKGTPSRGEMTDAAMASRAECVMLNKGPYLFKAITELDTLLGRMADHQHK HHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHC KTPQLRRLRSWG CCHHHHHHHCCC >Mature Secondary Structure PTEVARLKQKLDRLIAEIEADSRPRVAAWGDRIERPGFAASAGNLAHYLALRRHDLRPL CHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHH QRALMTLGLSSLGRLESRVMPTLVAVRATLAALCGEPEALRPSPRQFFAGEHALAERSEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHH LFGLPSSGRATALLVTCPSEAADDPSFMLRLAERKVEAVRINCAHDDADAWQRMINHLHV HCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHH AEEATGHRMKVLMDIAGPKIRTGAARAPEGRERILTGDLIAIVAAGALHRIDLADDHFAV HHHCCCCEEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCHHHEEECCCCCEEE ECTLSDPLINSAVGARVFVDDGKLCIRIERKTPWGLVGRVTSTSDKGLRLKPEKGLNFPD EEEECCCHHHHHCCCEEEEECCEEEEEEECCCCCCEEEEEECCCCCCEEECCCCCCCCCH TLLDIPALTAKDRTDLDFVAEHADGIEFSFVQSVADVETLQTALAERRPDDWRKLSLVLK HHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE IETPEAVANLPDILVQAAGQQPTAVMIARGDLAVEIGFARLAEMQEEILWLGEAAHIPVI EECCHHHHCCHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCH WATQVLEQLVKKGTPSRGEMTDAAMASRAECVMLNKGPYLFKAITELDTLLGRMADHQHK HHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHC KTPQLRRLRSWG CCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]