| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is nosR [H]
Identifier: 86750252
GI number: 86750252
Start: 3592042
End: 3594300
Strand: Direct
Name: nosR [H]
Synonym: RPB_3141
Alternate gene names: 86750252
Gene position: 3592042-3594300 (Clockwise)
Preceding gene: 86750250
Following gene: 86750253
Centisome position: 67.37
GC content: 66.36
Gene sequence:
>2259_bases GTGTTGCTCGCGACGCTGCTGATCGTGTGCGGCGGCAGTGCTGTGCACGCCGCGTCTCTCGCCGATTTCATCGGCAAGGC TCAGCCGGGCGAGCTGCTGCCGGGCGCCGACAGATTTGGACCGCTGCAAGGCACGCCCGCGATCGCGCCGGTGTATCAGG ACGACCGGCTGCTCGGTTTCGCCTATCTCTCCTCCGATTTCGCCAACGCCACCGGCTATTCCGGAAAGCCGATCCAGATT CTGACCGGCATCGATCCGGCCGGCGTCATCAAGGGAATCAAGCTGGTCGAACACAAGGAACCGATCGTGCTGGTCGGGAT TCCGGTGCAGCGCATCCTCGACGTGGTCAACAAGCTGATCGGCGCCGACATGGCGCGCGTGGCGCGCGGCACGGCGCCGG CGCCGCAGGTCGATATCGTCAGCGGCGCGACCGTCACCGTGCTGGTGATGGGCGACAGCATCGTGCGCTCCGCCACCAAA CTGATCCGCAGCGGCCGCATCGGCGGCGGCGCTGTCGTCGCGGCCGCCGCGGTGCCGCCGGTGACGAGGACGATCGATCT CGACAAAAGCGAGGTTCGCGACTGGCAGGGATTGCTCGCCGACGGCGCGGTGCGGCGGCTGCTGGTCACCGTCGGCGAGG TCAATCAGGCGTTCGAAAAGTCCGGCAATACGGCGGCCGCGGCGCATCCCGAGGAAGGCGATCCCGACGAGCCGTTCGTC GACATGTACGCCGCCGACGTCGCGGTGCCGACGATCGGCCGCAGCCTGCTCGGCGACGATGGCTACAACCGCCTCGCCGC ACGGCTGAAGCCCGGGCAGCAGGCGCTTGTGGTCGCCGGCGCCGGGAAATACTCGTTCAAAGGCTCCGGCTATGTCCGCG GCGGCATCTTCGACCGCATCGAGCTGATCCAGGACGGCAACAGTATGCGGTTCCGCGACCGCGATCACACCCGGCTGGGA AGTCTGGCTGCGGAAGGCGCGCCGGAATTTCCGGAGATTGCTTTGTTCGTCGTTCCGAACGATTTCAGCTTCGACCCCAC GGCGCCCTGGTCACTGCAACTTCTGGTGCAGCGTGTCATCAACGTGCGCGACAAGGCGGTTCTGACCTTCGATCTCGGCT ACACGCTGCCGGAGGTGCTCACCAAACGGGAGCAGCAGGCGCCGACCGTCACCGATGCCGCTCCCGCCAAGGCTCCCGCT CCCGCCAAGGCGCCCTCCTCCAATCCGGCAGCCACGAGTTCGCCCGACGCGATGGATAACGGCGAGCAGCCGCTGTGGAT GCGGATCTGGCAGGGCGACCTGGTCAAGATCGGCATCACCATCGCCGCGCTCGGCACGCTGGTCGTGATCTTCTTCTTCC AGAACGCGCTGGTGCGGCGCCCCAGGCTCTACACCTGGGTGCGCCGGGCCTACCTCACCTTCATCCTGGTCTGGCTCGGC TGGTACGCCAACGCACAGCTCTCCGTCGTCAACGTGCTGACCTTCGCCAACTCGCTGATCTCCGGCTTCAGTTGGGAGTA CTTCCTGTCGGCGCCGCTGATCTTCCTGCTATGGGCATCCACCGCCGCCGGCCTGCTGTTCTGGGGCCGCGGTCCGCTCT GCGGCTGGCTGTGCCCGTTCGGCGCGCTGCAGGAGCTGCTCAACAACATCGCCCAGGCGTTCAAAGTCCCGCAATATCGG CTGCCGTGGGGGCTGCACGAACGGCTGTGGCCGATCAAATACATCATCTTCCTCGTGCTGTTCGGGCTGTCGCTGTACTC CACCGCCCTCGCCGAGCAAATCGCCGAAGTCGAACCGTTCAAGACCTCGATCGTGCTGAAATTCGCACGCGAGTGGCCGT TCGTGGTGTACGCGCTCACCTTGCTGGCCGTAGGACTGTTCGTCGAACGCTTCTTCTGCCGCTATCTCTGTCCGCTCGGC GCTGCGCTGGCGATCCCCGGCCGGATCCGGATGTTCGAGTGGCTGCGGCGCTGGCCGGAATGCGGATCGCCCTGCCAGCG CTGCGCCAACGAATGCCCGGTGCAGGCGATCCATCCGGAGGGCCACATCAACGTCAACGAATGCATCTACTGCATGCACT GCCAGGAATTGTACTTCGACGACCATCGCTGCCCGCATCAGATCCAGGTCCGGCTGAAGCGCGAGAAGCGCGCGGCGCTG GCGTCGCCCGCGATGCGCAGCGGCAAAGGCCCGGACACGCTCATCACCGCCGGCGGCCGACCGATCGCCGGCCTGACGAC ATCCCCACCCGCACCCTGA
Upstream 100 bases:
>100_bases CTCGACACTGAAACGGCATCGCGCAATTTCCCGCACTCCACCGATCGAAAACGATGGAACTATCTTGCGGGAATTACAAG CCATATCCGCCTTCCTATCC
Downstream 100 bases:
>100_bases AAGCCTAGGAGCAAACGATGACCGACAACACCAAGGATCACGGCGTCAGCCGACGCACCTTGCTCGGAACCACTGCCGCG GCGGCCGGCGTCGGCCTCGC
Product: FMN-binding
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 752; Mature: 752
Protein sequence:
>752_residues MLLATLLIVCGGSAVHAASLADFIGKAQPGELLPGADRFGPLQGTPAIAPVYQDDRLLGFAYLSSDFANATGYSGKPIQI LTGIDPAGVIKGIKLVEHKEPIVLVGIPVQRILDVVNKLIGADMARVARGTAPAPQVDIVSGATVTVLVMGDSIVRSATK LIRSGRIGGGAVVAAAAVPPVTRTIDLDKSEVRDWQGLLADGAVRRLLVTVGEVNQAFEKSGNTAAAAHPEEGDPDEPFV DMYAADVAVPTIGRSLLGDDGYNRLAARLKPGQQALVVAGAGKYSFKGSGYVRGGIFDRIELIQDGNSMRFRDRDHTRLG SLAAEGAPEFPEIALFVVPNDFSFDPTAPWSLQLLVQRVINVRDKAVLTFDLGYTLPEVLTKREQQAPTVTDAAPAKAPA PAKAPSSNPAATSSPDAMDNGEQPLWMRIWQGDLVKIGITIAALGTLVVIFFFQNALVRRPRLYTWVRRAYLTFILVWLG WYANAQLSVVNVLTFANSLISGFSWEYFLSAPLIFLLWASTAAGLLFWGRGPLCGWLCPFGALQELLNNIAQAFKVPQYR LPWGLHERLWPIKYIIFLVLFGLSLYSTALAEQIAEVEPFKTSIVLKFAREWPFVVYALTLLAVGLFVERFFCRYLCPLG AALAIPGRIRMFEWLRRWPECGSPCQRCANECPVQAIHPEGHINVNECIYCMHCQELYFDDHRCPHQIQVRLKREKRAAL ASPAMRSGKGPDTLITAGGRPIAGLTTSPPAP
Sequences:
>Translated_752_residues MLLATLLIVCGGSAVHAASLADFIGKAQPGELLPGADRFGPLQGTPAIAPVYQDDRLLGFAYLSSDFANATGYSGKPIQI LTGIDPAGVIKGIKLVEHKEPIVLVGIPVQRILDVVNKLIGADMARVARGTAPAPQVDIVSGATVTVLVMGDSIVRSATK LIRSGRIGGGAVVAAAAVPPVTRTIDLDKSEVRDWQGLLADGAVRRLLVTVGEVNQAFEKSGNTAAAAHPEEGDPDEPFV DMYAADVAVPTIGRSLLGDDGYNRLAARLKPGQQALVVAGAGKYSFKGSGYVRGGIFDRIELIQDGNSMRFRDRDHTRLG SLAAEGAPEFPEIALFVVPNDFSFDPTAPWSLQLLVQRVINVRDKAVLTFDLGYTLPEVLTKREQQAPTVTDAAPAKAPA PAKAPSSNPAATSSPDAMDNGEQPLWMRIWQGDLVKIGITIAALGTLVVIFFFQNALVRRPRLYTWVRRAYLTFILVWLG WYANAQLSVVNVLTFANSLISGFSWEYFLSAPLIFLLWASTAAGLLFWGRGPLCGWLCPFGALQELLNNIAQAFKVPQYR LPWGLHERLWPIKYIIFLVLFGLSLYSTALAEQIAEVEPFKTSIVLKFAREWPFVVYALTLLAVGLFVERFFCRYLCPLG AALAIPGRIRMFEWLRRWPECGSPCQRCANECPVQAIHPEGHINVNECIYCMHCQELYFDDHRCPHQIQVRLKREKRAAL ASPAMRSGKGPDTLITAGGRPIAGLTTSPPAP >Mature_752_residues MLLATLLIVCGGSAVHAASLADFIGKAQPGELLPGADRFGPLQGTPAIAPVYQDDRLLGFAYLSSDFANATGYSGKPIQI LTGIDPAGVIKGIKLVEHKEPIVLVGIPVQRILDVVNKLIGADMARVARGTAPAPQVDIVSGATVTVLVMGDSIVRSATK LIRSGRIGGGAVVAAAAVPPVTRTIDLDKSEVRDWQGLLADGAVRRLLVTVGEVNQAFEKSGNTAAAAHPEEGDPDEPFV DMYAADVAVPTIGRSLLGDDGYNRLAARLKPGQQALVVAGAGKYSFKGSGYVRGGIFDRIELIQDGNSMRFRDRDHTRLG SLAAEGAPEFPEIALFVVPNDFSFDPTAPWSLQLLVQRVINVRDKAVLTFDLGYTLPEVLTKREQQAPTVTDAAPAKAPA PAKAPSSNPAATSSPDAMDNGEQPLWMRIWQGDLVKIGITIAALGTLVVIFFFQNALVRRPRLYTWVRRAYLTFILVWLG WYANAQLSVVNVLTFANSLISGFSWEYFLSAPLIFLLWASTAAGLLFWGRGPLCGWLCPFGALQELLNNIAQAFKVPQYR LPWGLHERLWPIKYIIFLVLFGLSLYSTALAEQIAEVEPFKTSIVLKFAREWPFVVYALTLLAVGLFVERFFCRYLCPLG AALAIPGRIRMFEWLRRWPECGSPCQRCANECPVQAIHPEGHINVNECIYCMHCQELYFDDHRCPHQIQVRLKREKRAAL ASPAMRSGKGPDTLITAGGRPIAGLTTSPPAP
Specific function: Transcriptional activator of the nitrous-oxide reductase gene nosZ [H]
COG id: COG3901
COG function: function code K; Regulator of nitric oxide reductase transcription
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787226, Length=196, Percent_Identity=28.0612244897959, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007329 - InterPro: IPR011399 [H]
Pfam domain/function: PF04205 FMN_bind [H]
EC number: NA
Molecular weight: Translated: 81730; Mature: 81730
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLATLLIVCGGSAVHAASLADFIGKAQPGELLPGADRFGPLQGTPAIAPVYQDDRLLGF CHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE AYLSSDFANATGYSGKPIQILTGIDPAGVIKGIKLVEHKEPIVLVGIPVQRILDVVNKLI HHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHEECCCCEEEECCCHHHHHHHHHHHH GADMARVARGTAPAPQVDIVSGATVTVLVMGDSIVRSATKLIRSGRIGGGAVVAAAAVPP CCHHHHHHCCCCCCCCEEEECCCEEEEEEECCHHHHHHHHHHHCCCCCCCCEEEECCCCC VTRTIDLDKSEVRDWQGLLADGAVRRLLVTVGEVNQAFEKSGNTAAAAHPEEGDPDEPFV CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHH DMYAADVAVPTIGRSLLGDDGYNRLAARLKPGQQALVVAGAGKYSFKGSGYVRGGIFDRI HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEECCCEECCCCCEEECCHHHHH ELIQDGNSMRFRDRDHTRLGSLAAEGAPEFPEIALFVVPNDFSFDPTAPWSLQLLVQRVI HHHHCCCCCEECCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH NVRDKAVLTFDLGYTLPEVLTKREQQAPTVTDAAPAKAPAPAKAPSSNPAATSSPDAMDN CCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GEQPLWMRIWQGDLVKIGITIAALGTLVVIFFFQNALVRRPRLYTWVRRAYLTFILVWLG CCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH WYANAQLSVVNVLTFANSLISGFSWEYFLSAPLIFLLWASTAAGLLFWGRGPLCGWLCPF HHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHCCH GALQELLNNIAQAFKVPQYRLPWGLHERLWPIKYIIFLVLFGLSLYSTALAEQIAEVEPF HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH KTSIVLKFAREWPFVVYALTLLAVGLFVERFFCRYLCPLGAALAIPGRIRMFEWLRRWPE HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCC CGSPCQRCANECPVQAIHPEGHINVNECIYCMHCQELYFDDHRCPHQIQVRLKREKRAAL CCCHHHHHHHHCCCEEECCCCCCCHHHHEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHH ASPAMRSGKGPDTLITAGGRPIAGLTTSPPAP HCCHHHCCCCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MLLATLLIVCGGSAVHAASLADFIGKAQPGELLPGADRFGPLQGTPAIAPVYQDDRLLGF CHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE AYLSSDFANATGYSGKPIQILTGIDPAGVIKGIKLVEHKEPIVLVGIPVQRILDVVNKLI HHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHEECCCCEEEECCCHHHHHHHHHHHH GADMARVARGTAPAPQVDIVSGATVTVLVMGDSIVRSATKLIRSGRIGGGAVVAAAAVPP CCHHHHHHCCCCCCCCEEEECCCEEEEEEECCHHHHHHHHHHHCCCCCCCCEEEECCCCC VTRTIDLDKSEVRDWQGLLADGAVRRLLVTVGEVNQAFEKSGNTAAAAHPEEGDPDEPFV CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHH DMYAADVAVPTIGRSLLGDDGYNRLAARLKPGQQALVVAGAGKYSFKGSGYVRGGIFDRI HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEECCCEECCCCCEEECCHHHHH ELIQDGNSMRFRDRDHTRLGSLAAEGAPEFPEIALFVVPNDFSFDPTAPWSLQLLVQRVI HHHHCCCCCEECCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH NVRDKAVLTFDLGYTLPEVLTKREQQAPTVTDAAPAKAPAPAKAPSSNPAATSSPDAMDN CCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GEQPLWMRIWQGDLVKIGITIAALGTLVVIFFFQNALVRRPRLYTWVRRAYLTFILVWLG CCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH WYANAQLSVVNVLTFANSLISGFSWEYFLSAPLIFLLWASTAAGLLFWGRGPLCGWLCPF HHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHCCH GALQELLNNIAQAFKVPQYRLPWGLHERLWPIKYIIFLVLFGLSLYSTALAEQIAEVEPF HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH KTSIVLKFAREWPFVVYALTLLAVGLFVERFFCRYLCPLGAALAIPGRIRMFEWLRRWPE HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCC CGSPCQRCANECPVQAIHPEGHINVNECIYCMHCQELYFDDHRCPHQIQVRLKREKRAAL CCCHHHHHHHHCCCEEECCCCCCCHHHHEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHH ASPAMRSGKGPDTLITAGGRPIAGLTTSPPAP HCCHHHCCCCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]