| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is cutL [H]
Identifier: 86750209
GI number: 86750209
Start: 3527565
End: 3529913
Strand: Direct
Name: cutL [H]
Synonym: RPB_3096
Alternate gene names: 86750209
Gene position: 3527565-3529913 (Clockwise)
Preceding gene: 86750208
Following gene: 86750218
Centisome position: 66.16
GC content: 64.2
Gene sequence:
>2349_bases ATGGCCGAGACGGGCGGATTCATTGGAAAGTCGGTTCCGCGGCGCGAAGACAAGCGGCTTCTGACCGGCAAGGGCGAGTT CGTCGCGGACCTCAAGCTGCCGTCGATGCTGCACGCGGCGTTCGTTCGCAGCCAGGTCGCCCATGGCCGGATCAAATCGG TCGATCTGTCGCGCGCCCTGCGGTCACCGGGCGTCGTCTATGCGATCTCCGGGCCGGATCTCGCCAAGCTGCTGCCACCC GTGCCCGACACGCAACTGTCGCTGCCGAAGAAATGGACGACGCGGGTCCAGCACACCTTCCTCAATCCGCAGCAACCGCT GCTCGCTTACGACAAGGTCCGGCATGTCGGCGAGGCCGTCGCGGTCATTCTCGCAGAGAGCCGCTACCTCGCTGAAGACG CCGCCGAGCTGGTGACCATGGAGATCGAGCCGCTGCCGGCCGTGGTAGATCCGGAAGCCGGGCTCACCCGCGACAGCGCC GTGTTGCACGAACAATACGACACCAATCTGATCGGCGATTTCGCCATTGCCAAAGGCGACGTCGAGACAGCGCTGGCGAA CGCGCCGCACCGCATGAAGCGCCGCTTCTATCATCATCGCTACGCCGCGATCCCGATGGAGGGCCGCGGCGTCGCCGCCA ACTACGACGCACGCACGGATTCGATCAACATCTGGTCGGCGTGCCAGGTCATTCACTGGCTCCGCCGCGAGGCGTCGACG GTGCTCGGCATGCCCGAAGCTCGCATTCGCTGCGTCGCGCTCGACGTCGGCGGCGGCTTCGGCGTCAAGGGCCACGTCTA TCCCGAAGAATTGCTGATTCCTTATCTTGCGCGCGAAGTCGGCCGCCCGGTGAAATGGATCGAGGATCGGCACGAGCATT TCATGAGCGCCTGCCATTCCCGCGACCAGACCCACGATGTAGAGTTCGGGTTCGACGACGACGGTCGTCTGCTAGCGTTC CAGGACGAATTCCTCGTCGATTGCGGCGCCTGGAATCCGATCGGCTCCGGCATCGCCTACAACACTGCGGTGCATTTGCC CGGCCCCTACAAATTCGAGCACTTCGCGGTGCGATCGAAGATCGTCGCCACCAACAAAGTGCCCAACGCGCCCTATCGCG GTGCCGGCCGCCCCGAAGCGACGTTCGCGATGGAGCGGGTGATCGATCTGATCGCGGCCGAACTCGGCCTCGATCCGGCC GACGTCCGCATGCGCAACATGATTCCGGCTTCCGAGATGCCGTATCGTCTCGGCCTTCCCTACCGGGACGGCGAGCCGAT CGTCTACGACAGCGGCGACTATCCGGAATCGCTGCGCCAGGCATTGGCGGCACTAGGAGGTGTCGACGCCTTCCGCGATC GGCAGCGGGCCGCACGGGCGCAAGGTCGATATTTCGGCCTCGGACTCGGATGCTACGTCGAAGGCACCGGCGTCGGACCG TTCGAAAGCGCTACCGTCCGCGTAGACCCGACCGGCAAGATCTATCTCGCAGGCGGCGCCTGCCCGCAGGGACAAGGCAT GGAAACGATCTTCTCGCAGATCGTCGCGGATGCCTGGCAGGTTCAACCCGATGACGTCGTCGTAGCATTGGCGGACACGA GCGTGATCTCGATCGGCTTCGGCACCATCGCGAGCCGCAGCACCGTGAACTTGTCGGGCGCAATCCACACCGCGAGCCAA TCGCTGCAGAAGAAGGTCTTCGCGATCGCAGCAGACATGCTCGAATGCTCGCCGGCCGACCTCGAGCTGCGCAACGGAAC CGTCGGCCTCGTCGGCGTACCGGGCAGAGAGATTCCCCTCGCCCGCATCGCCAAAGCGGCGATGCCCGGCTGGGACAACA AGCGACCCGCCGGTGTTTCAGCGGGGCTGGAGGAAACCGCCTACTTCGAGCCGCCGACCGTGACCTGGGCTTACGCGACG CACGCCGCGATCGTCGAGCTCGATGTCGAACTCGGCCGCGTCGAGATCGAGAAATACGTCATCGTGCATGATTGCGGCGT GGTGGTGAATCCGATGCTGGTCGACGGGCAGATTAACGGCGGCGCCGTGCAGGGCCTCGGCGGCGCGCTGCTGGAGGAAC TAAGCTACGATTCGGAAGGCCAGTTGCTGGTTGGATCGTTCATGGACTATCTAGTACCGGGCGCGAGCGACGTGCCGCAT TTCGAGCTGAAGCACATGCACTTCCCCTCGCCGCTGAATCCCTATGGCGTGAAAGGCGTCGGAGAAGGTAGCGCGATCGC GCCGCCGGTGGTCATCGCCAATGCGGTCTCCGATGCACTCTCTCACCTCAAGGTCGAATTCAATTCGACGCCGATCAGGC CTGAGCACATCGTCACAGCGTTCGGATAA
Upstream 100 bases:
>100_bases GGCGGTGCTGTGCCGCTGCACCGGCTATCAGAACATCGTCACCGCGGTGCTGGAAGCGGCTGCGGCCATGCGCGGCGACG CAAAGGCGGGAGCGTAGACC
Downstream 100 bases:
>100_bases TCACCAAATCCAGGGCGCCAGATCTCGCTCATGTGGCGCCGCTCCCGTGGTCTTCGAGACACGCAGCGGCGGCGCCCGGC AAGTGGCATCGCCGCACCTC
Product: carbon-monoxide dehydrogenase
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 782; Mature: 781
Protein sequence:
>782_residues MAETGGFIGKSVPRREDKRLLTGKGEFVADLKLPSMLHAAFVRSQVAHGRIKSVDLSRALRSPGVVYAISGPDLAKLLPP VPDTQLSLPKKWTTRVQHTFLNPQQPLLAYDKVRHVGEAVAVILAESRYLAEDAAELVTMEIEPLPAVVDPEAGLTRDSA VLHEQYDTNLIGDFAIAKGDVETALANAPHRMKRRFYHHRYAAIPMEGRGVAANYDARTDSINIWSACQVIHWLRREAST VLGMPEARIRCVALDVGGGFGVKGHVYPEELLIPYLAREVGRPVKWIEDRHEHFMSACHSRDQTHDVEFGFDDDGRLLAF QDEFLVDCGAWNPIGSGIAYNTAVHLPGPYKFEHFAVRSKIVATNKVPNAPYRGAGRPEATFAMERVIDLIAAELGLDPA DVRMRNMIPASEMPYRLGLPYRDGEPIVYDSGDYPESLRQALAALGGVDAFRDRQRAARAQGRYFGLGLGCYVEGTGVGP FESATVRVDPTGKIYLAGGACPQGQGMETIFSQIVADAWQVQPDDVVVALADTSVISIGFGTIASRSTVNLSGAIHTASQ SLQKKVFAIAADMLECSPADLELRNGTVGLVGVPGREIPLARIAKAAMPGWDNKRPAGVSAGLEETAYFEPPTVTWAYAT HAAIVELDVELGRVEIEKYVIVHDCGVVVNPMLVDGQINGGAVQGLGGALLEELSYDSEGQLLVGSFMDYLVPGASDVPH FELKHMHFPSPLNPYGVKGVGEGSAIAPPVVIANAVSDALSHLKVEFNSTPIRPEHIVTAFG
Sequences:
>Translated_782_residues MAETGGFIGKSVPRREDKRLLTGKGEFVADLKLPSMLHAAFVRSQVAHGRIKSVDLSRALRSPGVVYAISGPDLAKLLPP VPDTQLSLPKKWTTRVQHTFLNPQQPLLAYDKVRHVGEAVAVILAESRYLAEDAAELVTMEIEPLPAVVDPEAGLTRDSA VLHEQYDTNLIGDFAIAKGDVETALANAPHRMKRRFYHHRYAAIPMEGRGVAANYDARTDSINIWSACQVIHWLRREAST VLGMPEARIRCVALDVGGGFGVKGHVYPEELLIPYLAREVGRPVKWIEDRHEHFMSACHSRDQTHDVEFGFDDDGRLLAF QDEFLVDCGAWNPIGSGIAYNTAVHLPGPYKFEHFAVRSKIVATNKVPNAPYRGAGRPEATFAMERVIDLIAAELGLDPA DVRMRNMIPASEMPYRLGLPYRDGEPIVYDSGDYPESLRQALAALGGVDAFRDRQRAARAQGRYFGLGLGCYVEGTGVGP FESATVRVDPTGKIYLAGGACPQGQGMETIFSQIVADAWQVQPDDVVVALADTSVISIGFGTIASRSTVNLSGAIHTASQ SLQKKVFAIAADMLECSPADLELRNGTVGLVGVPGREIPLARIAKAAMPGWDNKRPAGVSAGLEETAYFEPPTVTWAYAT HAAIVELDVELGRVEIEKYVIVHDCGVVVNPMLVDGQINGGAVQGLGGALLEELSYDSEGQLLVGSFMDYLVPGASDVPH FELKHMHFPSPLNPYGVKGVGEGSAIAPPVVIANAVSDALSHLKVEFNSTPIRPEHIVTAFG >Mature_781_residues AETGGFIGKSVPRREDKRLLTGKGEFVADLKLPSMLHAAFVRSQVAHGRIKSVDLSRALRSPGVVYAISGPDLAKLLPPV PDTQLSLPKKWTTRVQHTFLNPQQPLLAYDKVRHVGEAVAVILAESRYLAEDAAELVTMEIEPLPAVVDPEAGLTRDSAV LHEQYDTNLIGDFAIAKGDVETALANAPHRMKRRFYHHRYAAIPMEGRGVAANYDARTDSINIWSACQVIHWLRREASTV LGMPEARIRCVALDVGGGFGVKGHVYPEELLIPYLAREVGRPVKWIEDRHEHFMSACHSRDQTHDVEFGFDDDGRLLAFQ DEFLVDCGAWNPIGSGIAYNTAVHLPGPYKFEHFAVRSKIVATNKVPNAPYRGAGRPEATFAMERVIDLIAAELGLDPAD VRMRNMIPASEMPYRLGLPYRDGEPIVYDSGDYPESLRQALAALGGVDAFRDRQRAARAQGRYFGLGLGCYVEGTGVGPF ESATVRVDPTGKIYLAGGACPQGQGMETIFSQIVADAWQVQPDDVVVALADTSVISIGFGTIASRSTVNLSGAIHTASQS LQKKVFAIAADMLECSPADLELRNGTVGLVGVPGREIPLARIAKAAMPGWDNKRPAGVSAGLEETAYFEPPTVTWAYATH AAIVELDVELGRVEIEKYVIVHDCGVVVNPMLVDGQINGGAVQGLGGALLEELSYDSEGQLLVGSFMDYLVPGASDVPHF ELKHMHFPSPLNPYGVKGVGEGSAIAPPVVIANAVSDALSHLKVEFNSTPIRPEHIVTAFG
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71773480, Length=786, Percent_Identity=24.6819338422392, Blast_Score=160, Evalue=6e-39, Organism=Homo sapiens, GI91823271, Length=790, Percent_Identity=21.8987341772152, Blast_Score=141, Evalue=3e-33, Organism=Escherichia coli, GI1789230, Length=778, Percent_Identity=29.8200514138817, Blast_Score=275, Evalue=7e-75, Organism=Escherichia coli, GI1789246, Length=821, Percent_Identity=25.4567600487211, Blast_Score=213, Evalue=4e-56, Organism=Escherichia coli, GI1786478, Length=752, Percent_Identity=25, Blast_Score=107, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17540638, Length=814, Percent_Identity=22.8501228501229, Blast_Score=139, Evalue=8e-33, Organism=Drosophila melanogaster, GI24647193, Length=821, Percent_Identity=24.2387332521315, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI17737937, Length=770, Percent_Identity=25.4545454545455, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI24647199, Length=794, Percent_Identity=23.9294710327456, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI24647201, Length=796, Percent_Identity=23.2412060301508, Blast_Score=108, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 84592; Mature: 84461
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS00879 ODR_DC_2_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETGGFIGKSVPRREDKRLLTGKGEFVADLKLPSMLHAAFVRSQVAHGRIKSVDLSRAL CCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHH RSPGVVYAISGPDLAKLLPPVPDTQLSLPKKWTTRVQHTFLNPQQPLLAYDKVRHVGEAV CCCCEEEEECCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AVILAESRYLAEDAAELVTMEIEPLPAVVDPEAGLTRDSAVLHEQYDTNLIGDFAIAKGD HHHHHCCHHHHHHHHHEEEEEECCCCCEECCCCCCCCCHHHHHHHCCCCCEECCEEECCC VETALANAPHRMKRRFYHHRYAAIPMEGRGVAANYDARTDSINIWSACQVIHWLRREAST HHHHHHCCCHHHHHHHHHHHEEECCCCCCCEEECCCCCCCCEEHHHHHHHHHHHHHHHHH VLGMPEARIRCVALDVGGGFGVKGHVYPEELLIPYLAREVGRPVKWIEDRHEHFMSACHS HCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC RDQTHDVEFGFDDDGRLLAFQDEFLVDCGAWNPIGSGIAYNTAVHLPGPYKFEHFAVRSK CCCCCCEEECCCCCCCEEEEECCEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHH IVATNKVPNAPYRGAGRPEATFAMERVIDLIAAELGLDPADVRMRNMIPASEMPYRLGLP EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEECCC YRDGEPIVYDSGDYPESLRQALAALGGVDAFRDRQRAARAQGRYFGLGLGCYVEGTGVGP CCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCC FESATVRVDPTGKIYLAGGACPQGQGMETIFSQIVADAWQVQPDDVVVALADTSVISIGF CCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEC GTIASRSTVNLSGAIHTASQSLQKKVFAIAADMLECSPADLELRNGTVGLVGVPGREIPL CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCCCCH ARIAKAAMPGWDNKRPAGVSAGLEETAYFEPPTVTWAYATHAAIVELDVELGRVEIEKYV HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEECCEEEEEEEE IVHDCGVVVNPMLVDGQINGGAVQGLGGALLEELSYDSEGQLLVGSFMDYLVPGASDVPH EEEECCEEECCEEEECCCCCCHHCCHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCCCC FELKHMHFPSPLNPYGVKGVGEGSAIAPPVVIANAVSDALSHLKVEFNSTPIRPEHIVTA CEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHEEEE FG CC >Mature Secondary Structure AETGGFIGKSVPRREDKRLLTGKGEFVADLKLPSMLHAAFVRSQVAHGRIKSVDLSRAL CCCCCCCCCCCCCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHH RSPGVVYAISGPDLAKLLPPVPDTQLSLPKKWTTRVQHTFLNPQQPLLAYDKVRHVGEAV CCCCEEEEECCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AVILAESRYLAEDAAELVTMEIEPLPAVVDPEAGLTRDSAVLHEQYDTNLIGDFAIAKGD HHHHHCCHHHHHHHHHEEEEEECCCCCEECCCCCCCCCHHHHHHHCCCCCEECCEEECCC VETALANAPHRMKRRFYHHRYAAIPMEGRGVAANYDARTDSINIWSACQVIHWLRREAST HHHHHHCCCHHHHHHHHHHHEEECCCCCCCEEECCCCCCCCEEHHHHHHHHHHHHHHHHH VLGMPEARIRCVALDVGGGFGVKGHVYPEELLIPYLAREVGRPVKWIEDRHEHFMSACHS HCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC RDQTHDVEFGFDDDGRLLAFQDEFLVDCGAWNPIGSGIAYNTAVHLPGPYKFEHFAVRSK CCCCCCEEECCCCCCCEEEEECCEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHH IVATNKVPNAPYRGAGRPEATFAMERVIDLIAAELGLDPADVRMRNMIPASEMPYRLGLP EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEECCC YRDGEPIVYDSGDYPESLRQALAALGGVDAFRDRQRAARAQGRYFGLGLGCYVEGTGVGP CCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCC FESATVRVDPTGKIYLAGGACPQGQGMETIFSQIVADAWQVQPDDVVVALADTSVISIGF CCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEC GTIASRSTVNLSGAIHTASQSLQKKVFAIAADMLECSPADLELRNGTVGLVGVPGREIPL CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCCCCH ARIAKAAMPGWDNKRPAGVSAGLEETAYFEPPTVTWAYATHAAIVELDVELGRVEIEKYV HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEECCEEEEEEEE IVHDCGVVVNPMLVDGQINGGAVQGLGGALLEELSYDSEGQLLVGSFMDYLVPGASDVPH EEEECCEEECCEEEECCCCCCHHCCHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCCCC FELKHMHFPSPLNPYGVKGVGEGSAIAPPVVIANAVSDALSHLKVEFNSTPIRPEHIVTA CEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHEEEE FG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]