| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is cutS [H]
Identifier: 86750208
GI number: 86750208
Start: 3527067
End: 3527561
Strand: Direct
Name: cutS [H]
Synonym: RPB_3095
Alternate gene names: 86750208
Gene position: 3527067-3527561 (Clockwise)
Preceding gene: 86750207
Following gene: 86750209
Centisome position: 66.15
GC content: 64.65
Gene sequence:
>495_bases ATGTCGAGATCAATCGAGGTCAAGCTCAAGGTCAACGGCAAGAGTTATGTGGGCCATTGCGAGTCCCGGACGCTGATGGC CGATTTCCTGCGCGATCACCTGAACCTGACCGGGACGCATGTCGGATGCGAGCATGGCGTCTGCGGCGTCTGCACCATCC TGGTCGACGGCGAAGCGGTGCGCTCCTGCATCATGCTGGCGGCGCAGGCCGACGGCGCCGACGTGGTGACGATCGAAGGG TTGTCGCAGGCGGGCGCGTACCATCCGGTCCAGAAGGCGTTTCACGATCACCACGCCCTGCAGTGCGGCTTCTGCACGCC GGGCATGCTGGCCACCGCGATCGATTTTCTCAACACCAATGCTTCCCCGACCGAACAGGAAGTGCGCGAGGCGCTATCGG CGGTGCTGTGCCGCTGCACCGGCTATCAGAACATCGTCACCGCGGTGCTGGAAGCGGCTGCGGCCATGCGCGGCGACGCA AAGGCGGGAGCGTAG
Upstream 100 bases:
>100_bases GAACGCTATCGCCGGCACCTCACCAAGGTGCTGACCAGGCGGGTGTTGCAGCGCGCCAAACAACAAGCCTGATAGCCCCA CTGCCGGAAAGCAACGAACG
Downstream 100 bases:
>100_bases ACCATGGCCGAGACGGGCGGATTCATTGGAAAGTCGGTTCCGCGGCGCGAAGACAAGCGGCTTCTGACCGGCAAGGGCGA GTTCGTCGCGGACCTCAAGC
Product: (2Fe-2S)-binding protein
Products: NA
Alternate protein names: CO dehydrogenase subunit S; CO-DH S [H]
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSRSIEVKLKVNGKSYVGHCESRTLMADFLRDHLNLTGTHVGCEHGVCGVCTILVDGEAVRSCIMLAAQADGADVVTIEG LSQAGAYHPVQKAFHDHHALQCGFCTPGMLATAIDFLNTNASPTEQEVREALSAVLCRCTGYQNIVTAVLEAAAAMRGDA KAGA
Sequences:
>Translated_164_residues MSRSIEVKLKVNGKSYVGHCESRTLMADFLRDHLNLTGTHVGCEHGVCGVCTILVDGEAVRSCIMLAAQADGADVVTIEG LSQAGAYHPVQKAFHDHHALQCGFCTPGMLATAIDFLNTNASPTEQEVREALSAVLCRCTGYQNIVTAVLEAAAAMRGDA KAGA >Mature_163_residues SRSIEVKLKVNGKSYVGHCESRTLMADFLRDHLNLTGTHVGCEHGVCGVCTILVDGEAVRSCIMLAAQADGADVVTIEGL SQAGAYHPVQKAFHDHHALQCGFCTPGMLATAIDFLNTNASPTEQEVREALSAVLCRCTGYQNIVTAVLEAAAAMRGDAK AGA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI71773480, Length=160, Percent_Identity=35.625, Blast_Score=78, Evalue=5e-15, Organism=Homo sapiens, GI91823271, Length=148, Percent_Identity=33.7837837837838, Blast_Score=74, Evalue=5e-14, Organism=Escherichia coli, GI1786480, Length=168, Percent_Identity=37.5, Blast_Score=127, Evalue=4e-31, Organism=Escherichia coli, GI1789232, Length=155, Percent_Identity=40.6451612903226, Blast_Score=117, Evalue=4e-28, Organism=Escherichia coli, GI1789246, Length=117, Percent_Identity=31.6239316239316, Blast_Score=65, Evalue=3e-12, Organism=Caenorhabditis elegans, GI32566215, Length=152, Percent_Identity=36.1842105263158, Blast_Score=108, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17539860, Length=152, Percent_Identity=35.5263157894737, Blast_Score=108, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17540638, Length=162, Percent_Identity=37.6543209876543, Blast_Score=105, Evalue=1e-23, Organism=Drosophila melanogaster, GI24647195, Length=160, Percent_Identity=34.375, Blast_Score=91, Evalue=5e-19, Organism=Drosophila melanogaster, GI24647197, Length=160, Percent_Identity=34.375, Blast_Score=91, Evalue=5e-19, Organism=Drosophila melanogaster, GI24647199, Length=154, Percent_Identity=33.7662337662338, Blast_Score=91, Evalue=5e-19, Organism=Drosophila melanogaster, GI17737937, Length=158, Percent_Identity=35.4430379746835, Blast_Score=90, Evalue=7e-19, Organism=Drosophila melanogaster, GI24647201, Length=127, Percent_Identity=36.2204724409449, Blast_Score=88, Evalue=3e-18, Organism=Drosophila melanogaster, GI24647193, Length=159, Percent_Identity=32.0754716981132, Blast_Score=80, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 17275; Mature: 17144
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSIEVKLKVNGKSYVGHCESRTLMADFLRDHLNLTGTHVGCEHGVCGVCTILVDGEAV CCCCEEEEEEECCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCHHH RSCIMLAAQADGADVVTIEGLSQAGAYHPVQKAFHDHHALQCGFCTPGMLATAIDFLNTN HHHHHHHHCCCCCCEEEECCCHHCCCCCHHHHHHHHHCCEEECCCCCHHHHHHHHHHCCC ASPTEQEVREALSAVLCRCTGYQNIVTAVLEAAAAMRGDAKAGA CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SRSIEVKLKVNGKSYVGHCESRTLMADFLRDHLNLTGTHVGCEHGVCGVCTILVDGEAV CCCEEEEEEECCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCHHH RSCIMLAAQADGADVVTIEGLSQAGAYHPVQKAFHDHHALQCGFCTPGMLATAIDFLNTN HHHHHHHHCCCCCCEEEECCCHHCCCCCHHHHHHHHHCCEEECCCCCHHHHHHHHHHCCC ASPTEQEVREALSAVLCRCTGYQNIVTAVLEAAAAMRGDAKAGA CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]