Click here to switch to the map view.

The map label for this gene is 86750177

Identifier: 86750177

GI number: 86750177

Start: 3492503

End: 3493282

Strand: Direct

Name: 86750177

Synonym: RPB_3061

Alternate gene names: NA

Gene position: 3492503-3493282 (Clockwise)

Preceding gene: 86750176

Following gene: 86750178

Centisome position: 65.51

GC content: 63.08

Gene sequence:

>780_bases
ATGCCCCTGAGAGTTCATCTGGTCGCCGGCTTCAACGGCGGCTCGGGCCGCACCCTGACGGCGGCGTTGCTGGCGTACGG
ATTCCATCTTCAGGCTCGCCGAACGCTGTTGGTGCGGCAGACTTACGCCGGCTCTGTCTCGGCGATCGACCCGATCGGAG
CGACGCTGCCATTGCCCTGTTGCGAATTGTCGCTGCCAAAGCCCTACGAGCTTCCGGCCGATCTTACCGCCGGGTTAGCG
ACGACGATCCATGATGCCGACGGAAGGTTCATGACTGCCCTGACGGATCTAGCGACGGCCGAAATCGGCGCAGACGGCGA
CGTCGTTGTGGACCTCTGCTGCCATGAACGCGCCTGCAACGCAGCGACCATCCGCTATGGTGCCGTGATCCTCGTCCCGG
TGCGGGCGTCGGTGCTCGAGATCGATTGGGCCGTTCGCAGCTTCAGCCATATCCTCGATTCGCAGCGTTATCGCGACACC
CCGGTGCCAACGTTGCTTGCGGCCATAGCTCCCGACAGCGAACGAGCCGGCCAGACGGCATTTCTGAGTGGCATGCTGCG
CGACTTCGATCCGGAGCGCGAGTTCGTGCCGGACGAACCAAGGGAAGTCATTGTGGAGGTGCCGTTTCTCGACGGAGCCT
CTCTGACCGCCCTCTTGATTGAACGTCCCATTTGGCAGGATCCGACACTGTTCGAGCGCTGCCGCATCTTTGCAGCTGCA
GTGGCCCTTCACGCCGACGCGTGCATGACCGTACCGACGGAGGATGCGGATGACCTCTGA

Upstream 100 bases:

>100_bases
CGTGCAACGACCAAGCTCCGCGCCACGTATGACGCACCTCCGGCCGCATCCCTGATGCGGCCGCGCGTTCCTTTTCGTCA
TGCGGCTTGAGGATGCCGTG

Downstream 100 bases:

>100_bases
TCGTCAGGCCCCCTCCTTTAGCCTCGATAGATCGGTCACCAGAGCAGAGGTTGGGGGGTGCTGCGTTGGCTTGAGCCGAT
GCCCTCGCGTTCAGGGAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MPLRVHLVAGFNGGSGRTLTAALLAYGFHLQARRTLLVRQTYAGSVSAIDPIGATLPLPCCELSLPKPYELPADLTAGLA
TTIHDADGRFMTALTDLATAEIGADGDVVVDLCCHERACNAATIRYGAVILVPVRASVLEIDWAVRSFSHILDSQRYRDT
PVPTLLAAIAPDSERAGQTAFLSGMLRDFDPEREFVPDEPREVIVEVPFLDGASLTALLIERPIWQDPTLFERCRIFAAA
VALHADACMTVPTEDADDL

Sequences:

>Translated_259_residues
MPLRVHLVAGFNGGSGRTLTAALLAYGFHLQARRTLLVRQTYAGSVSAIDPIGATLPLPCCELSLPKPYELPADLTAGLA
TTIHDADGRFMTALTDLATAEIGADGDVVVDLCCHERACNAATIRYGAVILVPVRASVLEIDWAVRSFSHILDSQRYRDT
PVPTLLAAIAPDSERAGQTAFLSGMLRDFDPEREFVPDEPREVIVEVPFLDGASLTALLIERPIWQDPTLFERCRIFAAA
VALHADACMTVPTEDADDL
>Mature_258_residues
PLRVHLVAGFNGGSGRTLTAALLAYGFHLQARRTLLVRQTYAGSVSAIDPIGATLPLPCCELSLPKPYELPADLTAGLAT
TIHDADGRFMTALTDLATAEIGADGDVVVDLCCHERACNAATIRYGAVILVPVRASVLEIDWAVRSFSHILDSQRYRDTP
VPTLLAAIAPDSERAGQTAFLSGMLRDFDPEREFVPDEPREVIVEVPFLDGASLTALLIERPIWQDPTLFERCRIFAAAV
ALHADACMTVPTEDADDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27954; Mature: 27823

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLRVHLVAGFNGGSGRTLTAALLAYGFHLQARRTLLVRQTYAGSVSAIDPIGATLPLPC
CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCH
CELSLPKPYELPADLTAGLATTIHDADGRFMTALTDLATAEIGADGDVVVDLCCHERACN
HCCCCCCCCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC
AATIRYGAVILVPVRASVLEIDWAVRSFSHILDSQRYRDTPVPTLLAAIAPDSERAGQTA
CEEEEECEEEEEECCCEEEHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHCCCCHHCCHHH
FLSGMLRDFDPEREFVPDEPREVIVEVPFLDGASLTALLIERPIWQDPTLFERCRIFAAA
HHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHH
VALHADACMTVPTEDADDL
HHHHCCCEEECCCCCCCCC
>Mature Secondary Structure 
PLRVHLVAGFNGGSGRTLTAALLAYGFHLQARRTLLVRQTYAGSVSAIDPIGATLPLPC
CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCH
CELSLPKPYELPADLTAGLATTIHDADGRFMTALTDLATAEIGADGDVVVDLCCHERACN
HCCCCCCCCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC
AATIRYGAVILVPVRASVLEIDWAVRSFSHILDSQRYRDTPVPTLLAAIAPDSERAGQTA
CEEEEECEEEEEECCCEEEHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHCCCCHHCCHHH
FLSGMLRDFDPEREFVPDEPREVIVEVPFLDGASLTALLIERPIWQDPTLFERCRIFAAA
HHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHH
VALHADACMTVPTEDADDL
HHHHCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA