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The map label for this gene is 86750096

Identifier: 86750096

GI number: 86750096

Start: 3391897

End: 3393291

Strand: Direct

Name: 86750096

Synonym: RPB_2979

Alternate gene names: NA

Gene position: 3391897-3393291 (Clockwise)

Preceding gene: 86750095

Following gene: 86750097

Centisome position: 63.62

GC content: 49.53

Gene sequence:

>1395_bases
ATGCTTACGCATTTAAAACTACAAAACTTCAAATCTTGGAGAAATGCCAATATCGCACTCGCGCCACTTACAGCCCTCTA
TGGCGCTAATTCATCCGGGAAAAGCAGCATAATTCAGTTCTTATTGATGCTGAAGCAAACGAAGGACTCGCAGGACCGGT
CGTTAGCGCTCGACTTCGGAGGAGTCGAATCCCCCGCAGACCTTGGATCATTCAAGGATGCAGTCTTCTTTCACCAGGAA
GATAATGCCATCTCCTGGCAACTCGACTGGCATCTCAAGAGCGACCTAAAAATTGCAGACCCATCCGGAAAGCGAACTGA
CTATCTGTTTGAAGGAAGGGAGATCAAGATTTCTTCCTCAGTTAGACTTCGTAACAAGCAGGCGGTCGGCGAGTATCTCG
AATACGATTTTGCAGGAACACAATTTACTCTCAAACGCGCAAGAGAACGACCTGCGTTTCAATTAGACACGCAAGGTCCG
AACGACTTTCGGTTCATCCGAACGCTGGGACGCAAGTGGGATTTGCCGGGCCCAACAAAATCCTACGCCTTTCCCGATCA
AGCTCGACTCTACTTCCAAAATTCTCAGTTTCTGAGCGAATTTGAGAACGAGTACGTCAAACAGATGGATAGCCTGATTC
ATCTTGGCCCGCTCCGAGACTACCCCAAACGTCAGTATATTTGGGCTGGATCTAGCCCGATCGACGTTGGGCGGACCGGC
GAGCGGACTATCGAGGCTATACTTGCCGCCACCTCCCGGAACGAAGTCAGAAACCTTCGCGCCAAAGCTCGACTAAGGCC
ATTTCAAGAGATGATAGCTTGGTGGCTTAGGGAAATGGGCCTCATCCACTCATTTAAACTCGTGGAGATCGGTTCTGGTG
CTGGACTTTATCGAACTGTAATCAAGCGCGACCCTGAATCTCCAGAAACGCTTATAACGGATGTTGGATTCGGAATTTCT
CAGATTCTTCCCGCTCTCGTTCTACTATACTACGCACCTGAGGGATCGACGATCGTACTCGAACAACCAGAAATACATCT
TCATCCCGCAATTCAGTCTTCTCTTGCAGACTTGATCATAACCGCAATTAAGACCCGCAACATACAGGTCATTCTCGAGA
GCCACAGCGAGCATCTGCTCATGCGACTATTGAGGCGAGTAGCCGAGGGTAACAAGTCACCATATCCCGAGATTGAACCC
CAAGATATGAAGGTTTATTTTTGCCAAGCTCGTGACGGAGAATCACGAGCGGAGGAATTGAAGGTGAACTTGTTCGGCTC
GATCGAGAATTGGCCAACCGATTTCTTCGGCGATCAATTTGGAGAGATCGCAGCGCGCGAGGAGGCGGCTATCCAGAAAC
AAGCCGCATTGAGCAAACGTGCGCGCAATCGTTGA

Upstream 100 bases:

>100_bases
GGCACCAAGGCCGAAGCAAGGTTCGCCTTCATCAGCGACAAGGCGGAATTCGCGAGCGAGGATCTGCTGGACGTGTGAAC
CCGATACGAAAGCGCTGCGC

Downstream 100 bases:

>100_bases
TGAAAACGTGGCGATTGTCGCAAATGATGTTTCGCGGCAGATCAAACAAGCCCCTCAAGCCTCGATCGCTTGTCGAATGG
CGTGCATCGATGCGCTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MLTHLKLQNFKSWRNANIALAPLTALYGANSSGKSSIIQFLLMLKQTKDSQDRSLALDFGGVESPADLGSFKDAVFFHQE
DNAISWQLDWHLKSDLKIADPSGKRTDYLFEGREIKISSSVRLRNKQAVGEYLEYDFAGTQFTLKRARERPAFQLDTQGP
NDFRFIRTLGRKWDLPGPTKSYAFPDQARLYFQNSQFLSEFENEYVKQMDSLIHLGPLRDYPKRQYIWAGSSPIDVGRTG
ERTIEAILAATSRNEVRNLRAKARLRPFQEMIAWWLREMGLIHSFKLVEIGSGAGLYRTVIKRDPESPETLITDVGFGIS
QILPALVLLYYAPEGSTIVLEQPEIHLHPAIQSSLADLIITAIKTRNIQVILESHSEHLLMRLLRRVAEGNKSPYPEIEP
QDMKVYFCQARDGESRAEELKVNLFGSIENWPTDFFGDQFGEIAAREEAAIQKQAALSKRARNR

Sequences:

>Translated_464_residues
MLTHLKLQNFKSWRNANIALAPLTALYGANSSGKSSIIQFLLMLKQTKDSQDRSLALDFGGVESPADLGSFKDAVFFHQE
DNAISWQLDWHLKSDLKIADPSGKRTDYLFEGREIKISSSVRLRNKQAVGEYLEYDFAGTQFTLKRARERPAFQLDTQGP
NDFRFIRTLGRKWDLPGPTKSYAFPDQARLYFQNSQFLSEFENEYVKQMDSLIHLGPLRDYPKRQYIWAGSSPIDVGRTG
ERTIEAILAATSRNEVRNLRAKARLRPFQEMIAWWLREMGLIHSFKLVEIGSGAGLYRTVIKRDPESPETLITDVGFGIS
QILPALVLLYYAPEGSTIVLEQPEIHLHPAIQSSLADLIITAIKTRNIQVILESHSEHLLMRLLRRVAEGNKSPYPEIEP
QDMKVYFCQARDGESRAEELKVNLFGSIENWPTDFFGDQFGEIAAREEAAIQKQAALSKRARNR
>Mature_464_residues
MLTHLKLQNFKSWRNANIALAPLTALYGANSSGKSSIIQFLLMLKQTKDSQDRSLALDFGGVESPADLGSFKDAVFFHQE
DNAISWQLDWHLKSDLKIADPSGKRTDYLFEGREIKISSSVRLRNKQAVGEYLEYDFAGTQFTLKRARERPAFQLDTQGP
NDFRFIRTLGRKWDLPGPTKSYAFPDQARLYFQNSQFLSEFENEYVKQMDSLIHLGPLRDYPKRQYIWAGSSPIDVGRTG
ERTIEAILAATSRNEVRNLRAKARLRPFQEMIAWWLREMGLIHSFKLVEIGSGAGLYRTVIKRDPESPETLITDVGFGIS
QILPALVLLYYAPEGSTIVLEQPEIHLHPAIQSSLADLIITAIKTRNIQVILESHSEHLLMRLLRRVAEGNKSPYPEIEP
QDMKVYFCQARDGESRAEELKVNLFGSIENWPTDFFGDQFGEIAAREEAAIQKQAALSKRARNR

Specific function: Unknown

COG id: COG4938

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52872; Mature: 52872

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTHLKLQNFKSWRNANIALAPLTALYGANSSGKSSIIQFLLMLKQTKDSQDRSLALDFG
CCCCEEHHHHHHHCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECC
GVESPADLGSFKDAVFFHQEDNAISWQLDWHLKSDLKIADPSGKRTDYLFEGREIKISSS
CCCCCHHHCCCCCEEEEEECCCEEEEEEEEEECCCCEEECCCCCCCCEEECCCEEEEECC
VRLRNKQAVGEYLEYDFAGTQFTLKRARERPAFQLDTQGPNDFRFIRTLGRKWDLPGPTK
EEECCHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCC
SYAFPDQARLYFQNSQFLSEFENEYVKQMDSLIHLGPLRDYPKRQYIWAGSSPIDVGRTG
CCCCCCHHEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCC
ERTIEAILAATSRNEVRNLRAKARLRPFQEMIAWWLREMGLIHSFKLVEIGSGAGLYRTV
HHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHH
IKRDPESPETLITDVGFGISQILPALVLLYYAPEGSTIVLEQPEIHLHPAIQSSLADLII
HHCCCCCCHHHHHHCCCCHHHHHHHHHHHEECCCCCEEEEECCCEEECHHHHHHHHHHHH
TAIKTRNIQVILESHSEHLLMRLLRRVAEGNKSPYPEIEPQDMKVYFCQARDGESRAEEL
HHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHE
KVNLFGSIENWPTDFFGDQFGEIAAREEAAIQKQAALSKRARNR
EEEEEECCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLTHLKLQNFKSWRNANIALAPLTALYGANSSGKSSIIQFLLMLKQTKDSQDRSLALDFG
CCCCEEHHHHHHHCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECC
GVESPADLGSFKDAVFFHQEDNAISWQLDWHLKSDLKIADPSGKRTDYLFEGREIKISSS
CCCCCHHHCCCCCEEEEEECCCEEEEEEEEEECCCCEEECCCCCCCCEEECCCEEEEECC
VRLRNKQAVGEYLEYDFAGTQFTLKRARERPAFQLDTQGPNDFRFIRTLGRKWDLPGPTK
EEECCHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCC
SYAFPDQARLYFQNSQFLSEFENEYVKQMDSLIHLGPLRDYPKRQYIWAGSSPIDVGRTG
CCCCCCHHEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCC
ERTIEAILAATSRNEVRNLRAKARLRPFQEMIAWWLREMGLIHSFKLVEIGSGAGLYRTV
HHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHH
IKRDPESPETLITDVGFGISQILPALVLLYYAPEGSTIVLEQPEIHLHPAIQSSLADLII
HHCCCCCCHHHHHHCCCCHHHHHHHHHHHEECCCCCEEEEECCCEEECHHHHHHHHHHHH
TAIKTRNIQVILESHSEHLLMRLLRRVAEGNKSPYPEIEPQDMKVYFCQARDGESRAEEL
HHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHE
KVNLFGSIENWPTDFFGDQFGEIAAREEAAIQKQAALSKRARNR
EEEEEECCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA