Click here to switch to the map view.

The map label for this gene is 86750097

Identifier: 86750097

GI number: 86750097

Start: 3393275

End: 3393778

Strand: Direct

Name: 86750097

Synonym: RPB_2980

Alternate gene names: NA

Gene position: 3393275-3393778 (Clockwise)

Preceding gene: 86750096

Following gene: 86750098

Centisome position: 63.64

GC content: 49.4

Gene sequence:

>504_bases
GTGCGCGCAATCGTTGATGAAAACGTGGCGATTGTCGCAAATGATGTTTCGCGGCAGATCAAACAAGCCCCTCAAGCCTC
GATCGCTTGTCGAATGGCGTGCATCGATGCGCTGAAAAAAGTTGTTAAGAATGGGATTGTTGTATTGGATGACGCGGGTG
AGGTGCTTGCGAAATATCGCCATTACCTGAATGGCCGGGGACTGCCAGGCGTTGGCGATGCATTCCTCCGGCACATTGTC
GAGAATCAATACAATCCTAGAAAGGTTCGAAGACAGGCACTCAGAAGGAACGAAGATGGCAGCTTTGCCGATTTTCCTGT
CGATGCTAGCTTAGCTCGCTTCGATCCAGCAGATCGGATCTTTGTAGCACTTGCTTGCGCGGTGTCTGATCGATGTTCAA
TCTTAAATGCAGTGGACAGCGACTACTCAATTCACATTAAAGACTTAAGCTCGTTTGGGGTGGAGGTCGTTGAACTATGC
CCTGACTGTCTTCGAAAAGGCTAA

Upstream 100 bases:

>100_bases
TCGATCGAGAATTGGCCAACCGATTTCTTCGGCGATCAATTTGGAGAGATCGCAGCGCGCGAGGAGGCGGCTATCCAGAA
ACAAGCCGCATTGAGCAAAC

Downstream 100 bases:

>100_bases
CGAAGGCCATACAAGGGCTTTAAAGGGCACTGCTTAGCGAGGCCGATGACAATTGGAGACCTCCCCATGCGCATACTCTT
CCTCGTCATCGGCATCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MRAIVDENVAIVANDVSRQIKQAPQASIACRMACIDALKKVVKNGIVVLDDAGEVLAKYRHYLNGRGLPGVGDAFLRHIV
ENQYNPRKVRRQALRRNEDGSFADFPVDASLARFDPADRIFVALACAVSDRCSILNAVDSDYSIHIKDLSSFGVEVVELC
PDCLRKG

Sequences:

>Translated_167_residues
MRAIVDENVAIVANDVSRQIKQAPQASIACRMACIDALKKVVKNGIVVLDDAGEVLAKYRHYLNGRGLPGVGDAFLRHIV
ENQYNPRKVRRQALRRNEDGSFADFPVDASLARFDPADRIFVALACAVSDRCSILNAVDSDYSIHIKDLSSFGVEVVELC
PDCLRKG
>Mature_167_residues
MRAIVDENVAIVANDVSRQIKQAPQASIACRMACIDALKKVVKNGIVVLDDAGEVLAKYRHYLNGRGLPGVGDAFLRHIV
ENQYNPRKVRRQALRRNEDGSFADFPVDASLARFDPADRIFVALACAVSDRCSILNAVDSDYSIHIKDLSSFGVEVVELC
PDCLRKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18372; Mature: 18372

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAIVDENVAIVANDVSRQIKQAPQASIACRMACIDALKKVVKNGIVVLDDAGEVLAKYR
CCCCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHH
HYLNGRGLPGVGDAFLRHIVENQYNPRKVRRQALRRNEDGSFADFPVDASLARFDPADRI
HHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHH
FVALACAVSDRCSILNAVDSDYSIHIKDLSSFGVEVVELCPDCLRKG
HHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCHHHHCCC
>Mature Secondary Structure
MRAIVDENVAIVANDVSRQIKQAPQASIACRMACIDALKKVVKNGIVVLDDAGEVLAKYR
CCCCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHH
HYLNGRGLPGVGDAFLRHIVENQYNPRKVRRQALRRNEDGSFADFPVDASLARFDPADRI
HHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHH
FVALACAVSDRCSILNAVDSDYSIHIKDLSSFGVEVVELCPDCLRKG
HHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA