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The map label for this gene is hdeD [C]

Identifier: 86750069

GI number: 86750069

Start: 3362188

End: 3362766

Strand: Direct

Name: hdeD [C]

Synonym: RPB_2952

Alternate gene names: 86750069

Gene position: 3362188-3362766 (Clockwise)

Preceding gene: 86750067

Following gene: 86750073

Centisome position: 63.06

GC content: 67.01

Gene sequence:

>579_bases
ATGACACTCTCAGACGGACCCGAGCGGCTTCAGGCCACGGTCGAGGCGGCGATCGGCAAGCACTGGAAGGCCTATCTGGT
CGAAGGCATCCTGCTTCTGGTCTTCGGCTTCGCCGCGATCCTGCTGCCGCTGCTCGCCAGCCTCGCGATCACGATCCTGC
TCGGCTGGCTTTTCCTGGTCAGCGGCATCGCCGGCCTCGCCTTCAGCTTCTGGGCGCGGCAGGCGCCGGGGTTCTGGTGG
TCGCTGGCCTCCGCAATCCTGGCGGTGATCGCCGGCATCGTCGTGATCTCGATGCCGGTGGAGATCACGGTGACGCTCAC
CTTGGTGATCGGCATCTACTTCCTGGCCGAAGGCGTGGCGACGATCATGTACGCGCTCCAGCACCGCGGCCGGCTGTCGG
AACGCTGGGGCTGGATGCTCGCCGCCGGCGTGCTCGACATCCTGGTGGCGTTCATCATCATCTCGGGATGGCCCGGCACC
GCGGCCTGGGCGGTCGGCCTTCTGGTCGGCATCAATCTGGTGTTCGGCGGCACCTCGCTGATCGCGATGGCGCTCGCCGC
CCGCAACAAGGCGTCATGA

Upstream 100 bases:

>100_bases
GGCGCCAAATCGGCGCCAAGCGGGAATACCGGCGAACAATTTGCGCCACCACCCGTTGCGCAGGGGTATGTTCCGCGTGT
TCACGGCACAGGAGATTCCC

Downstream 100 bases:

>100_bases
TGCCGTAAGGCGACGCCGCTGAAACGCGTCTGGCCGCGGCTCAGCAGCCGCGGCAGATGCTCTTGATCTTGCGGTCGAGC
GCCGCATCGGCCGGATCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MTLSDGPERLQATVEAAIGKHWKAYLVEGILLLVFGFAAILLPLLASLAITILLGWLFLVSGIAGLAFSFWARQAPGFWW
SLASAILAVIAGIVVISMPVEITVTLTLVIGIYFLAEGVATIMYALQHRGRLSERWGWMLAAGVLDILVAFIIISGWPGT
AAWAVGLLVGINLVFGGTSLIAMALAARNKAS

Sequences:

>Translated_192_residues
MTLSDGPERLQATVEAAIGKHWKAYLVEGILLLVFGFAAILLPLLASLAITILLGWLFLVSGIAGLAFSFWARQAPGFWW
SLASAILAVIAGIVVISMPVEITVTLTLVIGIYFLAEGVATIMYALQHRGRLSERWGWMLAAGVLDILVAFIIISGWPGT
AAWAVGLLVGINLVFGGTSLIAMALAARNKAS
>Mature_191_residues
TLSDGPERLQATVEAAIGKHWKAYLVEGILLLVFGFAAILLPLLASLAITILLGWLFLVSGIAGLAFSFWARQAPGFWWS
LASAILAVIAGIVVISMPVEITVTLTLVIGIYFLAEGVATIMYALQHRGRLSERWGWMLAAGVLDILVAFIIISGWPGTA
AWAVGLLVGINLVFGGTSLIAMALAARNKAS

Specific function: Unknown

COG id: COG3247

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasmic protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20362; Mature: 20231

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSDGPERLQATVEAAIGKHWKAYLVEGILLLVFGFAAILLPLLASLAITILLGWLFLV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGIAGLAFSFWARQAPGFWWSLASAILAVIAGIVVISMPVEITVTLTLVIGIYFLAEGVA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
TIMYALQHRGRLSERWGWMLAAGVLDILVAFIIISGWPGTAAWAVGLLVGINLVFGGTSL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
IAMALAARNKAS
HHHHHHHHCCCC
>Mature Secondary Structure 
TLSDGPERLQATVEAAIGKHWKAYLVEGILLLVFGFAAILLPLLASLAITILLGWLFLV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGIAGLAFSFWARQAPGFWWSLASAILAVIAGIVVISMPVEITVTLTLVIGIYFLAEGVA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
TIMYALQHRGRLSERWGWMLAAGVLDILVAFIIISGWPGTAAWAVGLLVGINLVFGGTSL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
IAMALAARNKAS
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA