Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86750067
Identifier: 86750067
GI number: 86750067
Start: 3361243
End: 3361617
Strand: Direct
Name: 86750067
Synonym: RPB_2950
Alternate gene names: NA
Gene position: 3361243-3361617 (Clockwise)
Preceding gene: 86750057
Following gene: 86750069
Centisome position: 63.04
GC content: 59.73
Gene sequence:
>375_bases ATGGCCAGGATCGGGAACGCCCGCACGATTGCAGACATTGAATTCGTCATCGATGCGCCAAGCCCTGCCACCGACCAGGC CACGTGGACGGTTCACGGCGTGGAATGCTCTCGCGAACGACACCGATACAATGGACCAAGCTACTCGTTCGCCCTCGAGA TTCTCCAGTTGCGATCGAAGGCGCAAGGGCAGCCGCCATGGCATGTCGTCATCATCGGCGAACTTTGGAATTTTTACGAC GCCAAGGCGGCGCCGCACAAAACCCAGCACCTCAAGGTGATTTCCGGCAAAGCCGCCGATATCCTCGCGTGGATGCGGCA CAACAGGAATGCGAAGCTTCAGCGAGCGACCTCGCACGACGGTCGACCCGAGTGA
Upstream 100 bases:
>100_bases TGTGCGCTCTGCGCTTTGGCCGCCGTTGCGGCGAAAATGATGCCGGCGTTGGGCCCGGGTGCGAAGCAGAAGCTCGTGTT GTTGCCGCTTTGGGGGATCG
Downstream 100 bases:
>100_bases CTCGGCATCGCGCAGAAACAGGTCGATGGACCACGGGCGGGTTTCGGGAGGAGCTTTCGACCCGCGCCGCGTCAAGGCTC TCACGCGACCGCCGGTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MARIGNARTIADIEFVIDAPSPATDQATWTVHGVECSRERHRYNGPSYSFALEILQLRSKAQGQPPWHVVIIGELWNFYD AKAAPHKTQHLKVISGKAADILAWMRHNRNAKLQRATSHDGRPE
Sequences:
>Translated_124_residues MARIGNARTIADIEFVIDAPSPATDQATWTVHGVECSRERHRYNGPSYSFALEILQLRSKAQGQPPWHVVIIGELWNFYD AKAAPHKTQHLKVISGKAADILAWMRHNRNAKLQRATSHDGRPE >Mature_123_residues ARIGNARTIADIEFVIDAPSPATDQATWTVHGVECSRERHRYNGPSYSFALEILQLRSKAQGQPPWHVVIIGELWNFYDA KAAPHKTQHLKVISGKAADILAWMRHNRNAKLQRATSHDGRPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13993; Mature: 13862
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIGNARTIADIEFVIDAPSPATDQATWTVHGVECSRERHRYNGPSYSFALEILQLRSK CCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHH AQGQPPWHVVIIGELWNFYDAKAAPHKTQHLKVISGKAADILAWMRHNRNAKLQRATSHD CCCCCCEEEEEEECCCCHHCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEECCCCC GRPE CCCC >Mature Secondary Structure ARIGNARTIADIEFVIDAPSPATDQATWTVHGVECSRERHRYNGPSYSFALEILQLRSK CCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHH AQGQPPWHVVIIGELWNFYDAKAAPHKTQHLKVISGKAADILAWMRHNRNAKLQRATSHD CCCCCCEEEEEEECCCCHHCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEECCCCC GRPE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA