Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86750067

Identifier: 86750067

GI number: 86750067

Start: 3361243

End: 3361617

Strand: Direct

Name: 86750067

Synonym: RPB_2950

Alternate gene names: NA

Gene position: 3361243-3361617 (Clockwise)

Preceding gene: 86750057

Following gene: 86750069

Centisome position: 63.04

GC content: 59.73

Gene sequence:

>375_bases
ATGGCCAGGATCGGGAACGCCCGCACGATTGCAGACATTGAATTCGTCATCGATGCGCCAAGCCCTGCCACCGACCAGGC
CACGTGGACGGTTCACGGCGTGGAATGCTCTCGCGAACGACACCGATACAATGGACCAAGCTACTCGTTCGCCCTCGAGA
TTCTCCAGTTGCGATCGAAGGCGCAAGGGCAGCCGCCATGGCATGTCGTCATCATCGGCGAACTTTGGAATTTTTACGAC
GCCAAGGCGGCGCCGCACAAAACCCAGCACCTCAAGGTGATTTCCGGCAAAGCCGCCGATATCCTCGCGTGGATGCGGCA
CAACAGGAATGCGAAGCTTCAGCGAGCGACCTCGCACGACGGTCGACCCGAGTGA

Upstream 100 bases:

>100_bases
TGTGCGCTCTGCGCTTTGGCCGCCGTTGCGGCGAAAATGATGCCGGCGTTGGGCCCGGGTGCGAAGCAGAAGCTCGTGTT
GTTGCCGCTTTGGGGGATCG

Downstream 100 bases:

>100_bases
CTCGGCATCGCGCAGAAACAGGTCGATGGACCACGGGCGGGTTTCGGGAGGAGCTTTCGACCCGCGCCGCGTCAAGGCTC
TCACGCGACCGCCGGTGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MARIGNARTIADIEFVIDAPSPATDQATWTVHGVECSRERHRYNGPSYSFALEILQLRSKAQGQPPWHVVIIGELWNFYD
AKAAPHKTQHLKVISGKAADILAWMRHNRNAKLQRATSHDGRPE

Sequences:

>Translated_124_residues
MARIGNARTIADIEFVIDAPSPATDQATWTVHGVECSRERHRYNGPSYSFALEILQLRSKAQGQPPWHVVIIGELWNFYD
AKAAPHKTQHLKVISGKAADILAWMRHNRNAKLQRATSHDGRPE
>Mature_123_residues
ARIGNARTIADIEFVIDAPSPATDQATWTVHGVECSRERHRYNGPSYSFALEILQLRSKAQGQPPWHVVIIGELWNFYDA
KAAPHKTQHLKVISGKAADILAWMRHNRNAKLQRATSHDGRPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13993; Mature: 13862

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIGNARTIADIEFVIDAPSPATDQATWTVHGVECSRERHRYNGPSYSFALEILQLRSK
CCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHH
AQGQPPWHVVIIGELWNFYDAKAAPHKTQHLKVISGKAADILAWMRHNRNAKLQRATSHD
CCCCCCEEEEEEECCCCHHCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEECCCCC
GRPE
CCCC
>Mature Secondary Structure 
ARIGNARTIADIEFVIDAPSPATDQATWTVHGVECSRERHRYNGPSYSFALEILQLRSK
CCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHH
AQGQPPWHVVIIGELWNFYDAKAAPHKTQHLKVISGKAADILAWMRHNRNAKLQRATSHD
CCCCCCEEEEEEECCCCHHCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEECCCCC
GRPE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA