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The map label for this gene is ybgL [C]

Identifier: 86749951

GI number: 86749951

Start: 3227628

End: 3228392

Strand: Direct

Name: ybgL [C]

Synonym: RPB_2834

Alternate gene names: 86749951

Gene position: 3227628-3228392 (Clockwise)

Preceding gene: 86749950

Following gene: 86749956

Centisome position: 60.54

GC content: 66.54

Gene sequence:

>765_bases
ATGAAGATCGATCTGAACTGCGACCTTGGTGAAGGTTTCGGCGCATGGAGCATGGGCGACGACGCGGCAATGATGCGCAT
CGCTACCAGCGTCAACGTCGCCTGCGGCTTTCATGCCGGCGATCCGGACATCATGCACAAGACGGTCGCGATGGCGAAGG
CGCATGGCGTTGCGATCGGGGCGCATCCGGGCTTTCGCGATCTGCACGGCTTCGGCCGCCGCCCGGTGCCGGGCATCACC
GCGGCCGAAATCGAAAACCTCGTGGCCTATCAGATCGGCGCGCTGCAGGCGGTCGCATCGCTGGCGGGACACAAGGTCAC
GCATGTGAAGGCGCACGGCGCGCTGTCGAACGTCGCCTGCCAGGACGACATGACCGCGCGCGCCATCGCTGCTGCGATCA
AGGCGGTCGATCCAAAACTGATCTTCGTGGTGCTGGCGAATTCGAAACTGGTCGACGCCGGCGAGGCCGCCGGCCTGGCG
ATGGTCCACGAGGTGTTCGCCGATCGCGCCTATGAGGACGACGGCAATCTGGTGTCGCGCCGCAAGCCCGGCGCCGTGCT
GCACGATCCGGCCGTCATCGCCGAACGGGTGTTGCGGATGGCGCAGGACGGCGCCGTGGTGTCGATGACCGGCAAGGTCA
TCAAGATGCGCACCGACACCGTGTGCATTCACGGCGACACCGCCGGCGCCGTCGACATCGCACGCGGCGTCAGGACGGCG
CTCGAGGCCAACGGCATCACGGTCGCGCCATTCGCCCGATCGTGA

Upstream 100 bases:

>100_bases
CAGCATATGACGCTCGACCTCGACGCGCTGCTGACGGCCAACGTGGCGGGCGCGGCCACCAACGCGCTCGAAATCTGAGA
TCGTTTCAAGAGGATGTGAG

Downstream 100 bases:

>100_bases
TGCGGGTCTGCTACTCGCCGAGCAGGCTCAGCAGTTCGGTAGTCAAGGCGCCGTCGGAGCCGGCCAGTTCGTCCAGCATC
GAAAAGTGATGATGCCCGGG

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKIDLNCDLGEGFGAWSMGDDAAMMRIATSVNVACGFHAGDPDIMHKTVAMAKAHGVAIGAHPGFRDLHGFGRRPVPGIT
AAEIENLVAYQIGALQAVASLAGHKVTHVKAHGALSNVACQDDMTARAIAAAIKAVDPKLIFVVLANSKLVDAGEAAGLA
MVHEVFADRAYEDDGNLVSRRKPGAVLHDPAVIAERVLRMAQDGAVVSMTGKVIKMRTDTVCIHGDTAGAVDIARGVRTA
LEANGITVAPFARS

Sequences:

>Translated_254_residues
MKIDLNCDLGEGFGAWSMGDDAAMMRIATSVNVACGFHAGDPDIMHKTVAMAKAHGVAIGAHPGFRDLHGFGRRPVPGIT
AAEIENLVAYQIGALQAVASLAGHKVTHVKAHGALSNVACQDDMTARAIAAAIKAVDPKLIFVVLANSKLVDAGEAAGLA
MVHEVFADRAYEDDGNLVSRRKPGAVLHDPAVIAERVLRMAQDGAVVSMTGKVIKMRTDTVCIHGDTAGAVDIARGVRTA
LEANGITVAPFARS
>Mature_254_residues
MKIDLNCDLGEGFGAWSMGDDAAMMRIATSVNVACGFHAGDPDIMHKTVAMAKAHGVAIGAHPGFRDLHGFGRRPVPGIT
AAEIENLVAYQIGALQAVASLAGHKVTHVKAHGALSNVACQDDMTARAIAAAIKAVDPKLIFVVLANSKLVDAGEAAGLA
MVHEVFADRAYEDDGNLVSRRKPGAVLHDPAVIAERVLRMAQDGAVVSMTGKVIKMRTDTVCIHGDTAGAVDIARGVRTA
LEANGITVAPFARS

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=249, Percent_Identity=44.9799196787149, Blast_Score=194, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2834_RHOP2 (Q2IW74)

Other databases:

- EMBL:   CP000250
- RefSeq:   YP_486447.1
- ProteinModelPortal:   Q2IW74
- SMR:   Q2IW74
- STRING:   Q2IW74
- GeneID:   3910627
- GenomeReviews:   CP000250_GR
- KEGG:   rpb:RPB_2834
- eggNOG:   COG1540
- HOGENOM:   HBG482818
- OMA:   QTICLHG
- ProtClustDB:   PRK05406
- BioCyc:   RPAL316058:RPB_2834-MONOMER
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 26406; Mature: 26406

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDLNCDLGEGFGAWSMGDDAAMMRIATSVNVACGFHAGDPDIMHKTVAMAKAHGVAIG
CEEEEECCCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCEEEE
AHPGFRDLHGFGRRPVPGITAAEIENLVAYQIGALQAVASLAGHKVTHVKAHGALSNVAC
CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCC
QDDMTARAIAAAIKAVDPKLIFVVLANSKLVDAGEAAGLAMVHEVFADRAYEDDGNLVSR
CCCHHHHHHHHHHHHCCCEEEEEEEECCCEECCCCCCHHHHHHHHHHHCCCCCCCCEECC
RKPGAVLHDPAVIAERVLRMAQDGAVVSMTGKVIKMRTDTVCIHGDTAGAVDIARGVRTA
CCCCCEEECHHHHHHHHHHHHCCCCEEEECCEEEEEEECEEEEECCCCCHHHHHHHHHHH
LEANGITVAPFARS
HHCCCEEEECCCCC
>Mature Secondary Structure
MKIDLNCDLGEGFGAWSMGDDAAMMRIATSVNVACGFHAGDPDIMHKTVAMAKAHGVAIG
CEEEEECCCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCEEEE
AHPGFRDLHGFGRRPVPGITAAEIENLVAYQIGALQAVASLAGHKVTHVKAHGALSNVAC
CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCC
QDDMTARAIAAAIKAVDPKLIFVVLANSKLVDAGEAAGLAMVHEVFADRAYEDDGNLVSR
CCCHHHHHHHHHHHHCCCEEEEEEEECCCEECCCCCCHHHHHHHHHHHCCCCCCCCEECC
RKPGAVLHDPAVIAERVLRMAQDGAVVSMTGKVIKMRTDTVCIHGDTAGAVDIARGVRTA
CCCCCEEECHHHHHHHHHHHHCCCCEEEECCEEEEEEECEEEEECCCCCHHHHHHHHHHH
LEANGITVAPFARS
HHCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA