| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is nuoI [H]
Identifier: 86749700
GI number: 86749700
Start: 2963762
End: 2964250
Strand: Direct
Name: nuoI [H]
Synonym: RPB_2582
Alternate gene names: 86749700
Gene position: 2963762-2964250 (Clockwise)
Preceding gene: 86749699
Following gene: 86749701
Centisome position: 55.59
GC content: 62.78
Gene sequence:
>489_bases ATGAATATCAACGCAACCGCCCGTTCGCTGCTGCTGACGGAATTCGTATCGGCGTTCTTCCTCGCCATGCGCTATTTCTT CAAGCCGAAGCCGACGATCAATTATCCTTTCGAGAAAAATCCGATCTCGCCCCGCTTCCGCGGCGAGCACGCGCTGCGCC GCTATCCCAACGGCGAGGAGCGCTGCATCGCCTGCAAGCTGTGCGAGGCGATCTGCCCGGCGCAGGCGATCACCATCGAG GCCGGTCCGCGGCGCAACGACGGCACCCGCCGCACCGTGCGCTACGACATCGACATGGTGAAGTGCATCTATTGCGGGCT GTGCCAGGAGGCCTGCCCGGTCGACGCGATCGTCGAGGGGCCGAATTTCGAATTCGCCACCGAGACCCGCGAAGAGCTGT ATTACGACAAGGCTCGGCTGCTCGCGAACGGTGATCGTTGGGAGCGCGAGATCGCCAAGTCGATCGAACTCGACGCGCCG TACCGGTGA
Upstream 100 bases:
>100_bases CGGCTCGGCTGGAAGGTGTTCCTGCCGCTGTCGCTGGCGATGGTGGTGATCGTCGCCGCCGTCCTGCAATTCGCGGGGCT CGCGCCGAAATGAGGCCGTC
Downstream 100 bases:
>100_bases GCTGACGCCATGTCCATGCCTGTCCTGTTCTTCTATCTCTACGCCGGGGCCGCGATCGCCGCCGCGGTGATGGTGGTGTT CGCGCGCAACCCGGTGCACT
Product: NADH dehydrogenase subunit I
Products: NA
Alternate protein names: NADH dehydrogenase I subunit I; NDH-1 subunit I [H]
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MNINATARSLLLTEFVSAFFLAMRYFFKPKPTINYPFEKNPISPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIE AGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEGPNFEFATETREELYYDKARLLANGDRWEREIAKSIELDAP YR
Sequences:
>Translated_162_residues MNINATARSLLLTEFVSAFFLAMRYFFKPKPTINYPFEKNPISPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIE AGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEGPNFEFATETREELYYDKARLLANGDRWEREIAKSIELDAP YR >Mature_162_residues MNINATARSLLLTEFVSAFFLAMRYFFKPKPTINYPFEKNPISPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIE AGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEGPNFEFATETREELYYDKARLLANGDRWEREIAKSIELDAP YR
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1143
COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI4505371, Length=156, Percent_Identity=73.0769230769231, Blast_Score=239, Evalue=6e-64, Organism=Escherichia coli, GI1788617, Length=142, Percent_Identity=38.7323943661972, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1789075, Length=127, Percent_Identity=28.3464566929134, Blast_Score=60, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17555194, Length=161, Percent_Identity=66.4596273291926, Blast_Score=227, Evalue=2e-60, Organism=Drosophila melanogaster, GI17864306, Length=156, Percent_Identity=69.8717948717949, Blast_Score=234, Evalue=1e-62,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012285 - InterPro: IPR010226 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 18715; Mature: 18715
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNINATARSLLLTEFVSAFFLAMRYFFKPKPTINYPFEKNPISPRFRGEHALRRYPNGEE CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCH RCIACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEG HHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEECC PNFEFATETREELYYDKARLLANGDRWEREIAKSIELDAPYR CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNINATARSLLLTEFVSAFFLAMRYFFKPKPTINYPFEKNPISPRFRGEHALRRYPNGEE CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCH RCIACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEG HHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEECC PNFEFATETREELYYDKARLLANGDRWEREIAKSIELDAPYR CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]