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The map label for this gene is 86749317

Identifier: 86749317

GI number: 86749317

Start: 2490709

End: 2491245

Strand: Reverse

Name: 86749317

Synonym: RPB_2197

Alternate gene names: NA

Gene position: 2491245-2490709 (Counterclockwise)

Preceding gene: 86749323

Following gene: 86749316

Centisome position: 46.73

GC content: 67.6

Gene sequence:

>537_bases
ATGGAGGGATTGCTGATGACCAAAGCTTCGCGACTGCTCGCCTTCGCCCTGCTCTCGGCCGCGCTGATCGCGCCGCCGGC
GTTCGCCGCGCCGGATTCCGACCCGGCGCCGCCGCCGAAATCGGACGCCAAGTCCGGCAAGAAGAAAGACGACCGCAAGT
CCGAGCAGCGCTTCCAGGACGGCTACCGCGCGGCTTACGCGACGATCTACGACCGCGCCGACTACGCCGCCGGCATCGAT
CAGCTGAAGGCGCTGAGCCGCGACGACAACGCCTCGGTGGCCACCCTGATCGGCTATTCCTATCGCAAGCTCGGCGACAT
GAAGCTGGCGCAGGCGTATTACGAGCGCGCGCTGAAGACCGACCCCGACCACGTCCGCACCTGGCAGTATTACGGCCTGT
GGCAGGTCGAACAGGGCCACCGCGAACGCGCGCGCTATCATCTCGACCGCATCGCCGCGCTGTGCGGCAACACGTCGTGC
GCGGAATACACATCGCTCGCCGAGGCGATCGCCGGCGGCGCCGGCGGATCGTACTGA

Upstream 100 bases:

>100_bases
CATTGGCCGGCACGGCGCGGCAAAGGGTTCGAGGCCGCGGCCGGGAATGTCCGGCGAGGCGCGGTGTTTCGATCAGGGCG
TCGCCCTGGATGGGTCGACA

Downstream 100 bases:

>100_bases
CCGGCCTCGCGCGGCCGCCCGCGGGCGGCTCGACAAAACCGGCAAAGGGCGTATAGACCAGCCCGGCGAAGCCCGCCTCC
CGGCGGGTTTCGCGCCGTCC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MEGLLMTKASRLLAFALLSAALIAPPAFAAPDSDPAPPPKSDAKSGKKKDDRKSEQRFQDGYRAAYATIYDRADYAAGID
QLKALSRDDNASVATLIGYSYRKLGDMKLAQAYYERALKTDPDHVRTWQYYGLWQVEQGHRERARYHLDRIAALCGNTSC
AEYTSLAEAIAGGAGGSY

Sequences:

>Translated_178_residues
MEGLLMTKASRLLAFALLSAALIAPPAFAAPDSDPAPPPKSDAKSGKKKDDRKSEQRFQDGYRAAYATIYDRADYAAGID
QLKALSRDDNASVATLIGYSYRKLGDMKLAQAYYERALKTDPDHVRTWQYYGLWQVEQGHRERARYHLDRIAALCGNTSC
AEYTSLAEAIAGGAGGSY
>Mature_178_residues
MEGLLMTKASRLLAFALLSAALIAPPAFAAPDSDPAPPPKSDAKSGKKKDDRKSEQRFQDGYRAAYATIYDRADYAAGID
QLKALSRDDNASVATLIGYSYRKLGDMKLAQAYYERALKTDPDHVRTWQYYGLWQVEQGHRERARYHLDRIAALCGNTSC
AEYTSLAEAIAGGAGGSY

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19535; Mature: 19535

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGLLMTKASRLLAFALLSAALIAPPAFAAPDSDPAPPPKSDAKSGKKKDDRKSEQRFQD
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHH
GYRAAYATIYDRADYAAGIDQLKALSRDDNASVATLIGYSYRKLGDMKLAQAYYERALKT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPDHVRTWQYYGLWQVEQGHRERARYHLDRIAALCGNTSCAEYTSLAEAIAGGAGGSY
CCCHHHEEHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEGLLMTKASRLLAFALLSAALIAPPAFAAPDSDPAPPPKSDAKSGKKKDDRKSEQRFQD
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHH
GYRAAYATIYDRADYAAGIDQLKALSRDDNASVATLIGYSYRKLGDMKLAQAYYERALKT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPDHVRTWQYYGLWQVEQGHRERARYHLDRIAALCGNTSCAEYTSLAEAIAGGAGGSY
CCCHHHEEHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA