Definition | Rhodopseudomonas palustris HaA2, complete genome. |
---|---|
Accession | NC_007778 |
Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is ppnK [H]
Identifier: 86749316
GI number: 86749316
Start: 2489806
End: 2490585
Strand: Reverse
Name: ppnK [H]
Synonym: RPB_2196
Alternate gene names: 86749316
Gene position: 2490585-2489806 (Counterclockwise)
Preceding gene: 86749317
Following gene: 86749315
Centisome position: 46.71
GC content: 67.95
Gene sequence:
>780_bases ATGACTCCCTCCCCGCGCCGCGACCGCATCGCCTTCGTCGCGAGCCAGAGCGCGGAAGCGCAAGCCGCACAGGCACAACT CGTGTCGCTCTACGGCGATCACGACGCCGCCGAGGCCGACGTCGTGGTCGCGCTCGGCGGCGACGGGCTGATGCTGCAGA CGCTGCATCAGCAGATGCGCAGCGGCCTGCCGATCTACGGCATGCACCGCGGCACGGTCGGCTTCCTGATGAACGAATAT TCGATCCACGATCTGCGCGGACGGCTCGAGGCCGCGCGCGAGACCGTGATCCATCCGCTGCTGATGCGCGCCACCGACAT CTACGGCGAGGTGCACATCCACCACGCCATCAACGAGGTCTCGCTGTTTCGGCAGAGCCATCAGGCGGCGCGGCTGCGCA TCATCATCGACGAGCGCGAGCGCATGAGCGAGCTCGTCGCCGACGGCATTCTGGTCGCGACGCCGGCGGGCTCGACCGCG TATAATCTGTCGGCGCAGGGCCCGATCCTGCCGATCAACGCGCAGTTACTTGCGCTGACGCCGATCTCGGCGTTCCGGCC GCGGCGCTGGCGCGGCGCGCTGTTGCCGGACAACGCCTTCGTGGTGATCGAAGTGCTGGAAGTCGACAAGCGCCCGGTGG CGGCGGTGGCCGATCACGACGAGGCGCGCGACGTGCGACGGGTCGAGGTGATTTCCGACAAGACCATCGCGCTGCGGATG CTGTTCGACCCCGGCCACAGCCTCGAGGAACGCATCCTCAGCGAGCAGTTCGGCACCTGA
Upstream 100 bases:
>100_bases GGCGGCTCGACAAAACCGGCAAAGGGCGTATAGACCAGCCCGGCGAAGCCCGCCTCCCGGCGGGTTTCGCGCCGTCCACG CCCGCGCAGAGCTTCGCCGC
Downstream 100 bases:
>100_bases CGGCGAGCGCCGCCGCGACGGGCTTTTTCAGTCGACAGATCAAGCACTTGCGCCTGACCTAGTGGGTCTTGCGGCAAACC TGTGGCAGCGCCGCCGGCCG
Product: inorganic polyphosphate/ATP-NAD kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase [H]
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MTPSPRRDRIAFVASQSAEAQAAQAQLVSLYGDHDAAEADVVVALGGDGLMLQTLHQQMRSGLPIYGMHRGTVGFLMNEY SIHDLRGRLEAARETVIHPLLMRATDIYGEVHIHHAINEVSLFRQSHQAARLRIIIDERERMSELVADGILVATPAGSTA YNLSAQGPILPINAQLLALTPISAFRPRRWRGALLPDNAFVVIEVLEVDKRPVAAVADHDEARDVRRVEVISDKTIALRM LFDPGHSLEERILSEQFGT
Sequences:
>Translated_259_residues MTPSPRRDRIAFVASQSAEAQAAQAQLVSLYGDHDAAEADVVVALGGDGLMLQTLHQQMRSGLPIYGMHRGTVGFLMNEY SIHDLRGRLEAARETVIHPLLMRATDIYGEVHIHHAINEVSLFRQSHQAARLRIIIDERERMSELVADGILVATPAGSTA YNLSAQGPILPINAQLLALTPISAFRPRRWRGALLPDNAFVVIEVLEVDKRPVAAVADHDEARDVRRVEVISDKTIALRM LFDPGHSLEERILSEQFGT >Mature_258_residues TPSPRRDRIAFVASQSAEAQAAQAQLVSLYGDHDAAEADVVVALGGDGLMLQTLHQQMRSGLPIYGMHRGTVGFLMNEYS IHDLRGRLEAARETVIHPLLMRATDIYGEVHIHHAINEVSLFRQSHQAARLRIIIDERERMSELVADGILVATPAGSTAY NLSAQGPILPINAQLLALTPISAFRPRRWRGALLPDNAFVVIEVLEVDKRPVAAVADHDEARDVRRVEVISDKTIALRML FDPGHSLEERILSEQFGT
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus [H]
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788968, Length=153, Percent_Identity=32.0261437908497, Blast_Score=62, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322509, Length=216, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6320794, Length=191, Percent_Identity=31.413612565445, Blast_Score=69, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6325068, Length=188, Percent_Identity=29.2553191489362, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 [H]
Pfam domain/function: PF01513 NAD_kinase [H]
EC number: =2.7.1.23 [H]
Molecular weight: Translated: 28616; Mature: 28485
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSPRRDRIAFVASQSAEAQAAQAQLVSLYGDHDAAEADVVVALGGDGLMLQTLHQQMR CCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHH SGLPIYGMHRGTVGFLMNEYSIHDLRGRLEAARETVIHPLLMRATDIYGEVHIHHAINEV CCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHH SLFRQSHQAARLRIIIDERERMSELVADGILVATPAGSTAYNLSAQGPILPINAQLLALT HHHHHHHCCEEEEEEECCHHHHHHHHHCCEEEEECCCCCEEECCCCCCEEEECCEEEEEC PISAFRPRRWRGALLPDNAFVVIEVLEVDKRPVAAVADHDEARDVRRVEVISDKTIALRM CHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCHHHHHHEEEEECCCEEEEEE LFDPGHSLEERILSEQFGT EECCCCHHHHHHHHHHCCC >Mature Secondary Structure TPSPRRDRIAFVASQSAEAQAAQAQLVSLYGDHDAAEADVVVALGGDGLMLQTLHQQMR CCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHH SGLPIYGMHRGTVGFLMNEYSIHDLRGRLEAARETVIHPLLMRATDIYGEVHIHHAINEV CCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHH SLFRQSHQAARLRIIIDERERMSELVADGILVATPAGSTAYNLSAQGPILPINAQLLALT HHHHHHHCCEEEEEEECCHHHHHHHHHCCEEEEECCCCCEEECCCCCCEEEECCEEEEEC PISAFRPRRWRGALLPDNAFVVIEVLEVDKRPVAAVADHDEARDVRRVEVISDKTIALRM CHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCHHHHHHEEEEECCCEEEEEE LFDPGHSLEERILSEQFGT EECCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA