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The map label for this gene is 86749281

Identifier: 86749281

GI number: 86749281

Start: 2449803

End: 2450594

Strand: Reverse

Name: 86749281

Synonym: RPB_2160

Alternate gene names: NA

Gene position: 2450594-2449803 (Counterclockwise)

Preceding gene: 86749284

Following gene: 86749276

Centisome position: 45.96

GC content: 65.53

Gene sequence:

>792_bases
ATGGCACAGACCGAGGGATCGCACGAACTCCTGCGCCGGCCGCTCGCCCGAGCGGCGCCCGAGGATCTGTTGTCCGCCGA
GAACGACAGCCTCCGGCTGTTGCTGTCCCAGGCCAGGCTCGATGCCTGGGACTTGTATTCGCAGTCCAACGCCGATGCCA
AGGCGAGCGCAGACGCTGACCAGCTTCACAAGCTGATCGTCGGCGAACTACATCACCGCATCAAGAACATGCTGGCGACC
GTGCTCGCCATCGTCTCGCAAAGCCTGCGCGGCGTCACCGAGGCGGAGCACGCCCGCCAGGCGATCGAGGGGCGATTGAT
GGCGCTCGGCAAGGCGCACGATCTGCTGCTGCAGGAGCGCTGGAGCAACGCCGATCTCGGTCAGATCGTGCGCGGCGCCA
TCATGCCGTTCGACAATCCGCAGGCATCCCGGATCGCGATCGAGGGCCCGGATCTCAGGATGGCCTCCGGCGCCGTCATT
GCGATTGCGATTGCGATGACGCTGAACGAACTCTGCACCAACGCGATGAAATACGGGGCGCTGTCGGCCGCGGACGGGCG
TGTCGAGATCACCTGGACGCTCGATCCCGCGACGCAGGCGATGCAATTGAGCTGGTGCGAACGAAACGGGCCGCCGGCGC
GCGTTCCGGACCATCAAGGCTTCGGCACGCGTCTGATCGAAATGCTGGGCAAGCAACTCAACGGCAAAGTGGCGCTCAGC
TACGAGACCGCCGGTTTCGCCTATCGGCTGGATGCGCCGCTGGCGTCGCTGATGGCGACGCCGCAGGACTAG

Upstream 100 bases:

>100_bases
ACCTGAAATCGAATCGCATTTTATTAGTTCTGATCGCAGAGCGATCCGGGACCGGTCGATAGCAATTGCAATTCGCGAGC
CGGAGGCAATACACTCGCGG

Downstream 100 bases:

>100_bases
AACAATTCTGCTTTTGATGGAATCGGAGTTGGCTGTCCGAGGTCGCCGTCATCCTGAGGTGCCCGCTGGGCCGCGCTGTG
CGCGGCGGCCGGATCTCACC

Product: signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MAQTEGSHELLRRPLARAAPEDLLSAENDSLRLLLSQARLDAWDLYSQSNADAKASADADQLHKLIVGELHHRIKNMLAT
VLAIVSQSLRGVTEAEHARQAIEGRLMALGKAHDLLLQERWSNADLGQIVRGAIMPFDNPQASRIAIEGPDLRMASGAVI
AIAIAMTLNELCTNAMKYGALSAADGRVEITWTLDPATQAMQLSWCERNGPPARVPDHQGFGTRLIEMLGKQLNGKVALS
YETAGFAYRLDAPLASLMATPQD

Sequences:

>Translated_263_residues
MAQTEGSHELLRRPLARAAPEDLLSAENDSLRLLLSQARLDAWDLYSQSNADAKASADADQLHKLIVGELHHRIKNMLAT
VLAIVSQSLRGVTEAEHARQAIEGRLMALGKAHDLLLQERWSNADLGQIVRGAIMPFDNPQASRIAIEGPDLRMASGAVI
AIAIAMTLNELCTNAMKYGALSAADGRVEITWTLDPATQAMQLSWCERNGPPARVPDHQGFGTRLIEMLGKQLNGKVALS
YETAGFAYRLDAPLASLMATPQD
>Mature_262_residues
AQTEGSHELLRRPLARAAPEDLLSAENDSLRLLLSQARLDAWDLYSQSNADAKASADADQLHKLIVGELHHRIKNMLATV
LAIVSQSLRGVTEAEHARQAIEGRLMALGKAHDLLLQERWSNADLGQIVRGAIMPFDNPQASRIAIEGPDLRMASGAVIA
IAIAMTLNELCTNAMKYGALSAADGRVEITWTLDPATQAMQLSWCERNGPPARVPDHQGFGTRLIEMLGKQLNGKVALSY
ETAGFAYRLDAPLASLMATPQD

Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light. Once ejected from an infected animal host, sunlight acts as an environmental signal that increases the virulence of the bacterium, preparing it for infection o

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR013655
- InterPro:   IPR011102 [H]

Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 28538; Mature: 28407

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTEGSHELLRRPLARAAPEDLLSAENDSLRLLLSQARLDAWDLYSQSNADAKASADAD
CCCCCCCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHH
QLHKLIVGELHHRIKNMLATVLAIVSQSLRGVTEAEHARQAIEGRLMALGKAHDLLLQER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WSNADLGQIVRGAIMPFDNPQASRIAIEGPDLRMASGAVIAIAIAMTLNELCTNAMKYGA
CCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHCC
LSAADGRVEITWTLDPATQAMQLSWCERNGPPARVPDHQGFGTRLIEMLGKQLNGKVALS
CCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEE
YETAGFAYRLDAPLASLMATPQD
EECCCEEEEECCHHHHHHCCCCC
>Mature Secondary Structure 
AQTEGSHELLRRPLARAAPEDLLSAENDSLRLLLSQARLDAWDLYSQSNADAKASADAD
CCCCCCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHH
QLHKLIVGELHHRIKNMLATVLAIVSQSLRGVTEAEHARQAIEGRLMALGKAHDLLLQER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WSNADLGQIVRGAIMPFDNPQASRIAIEGPDLRMASGAVIAIAIAMTLNELCTNAMKYGA
CCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHCC
LSAADGRVEITWTLDPATQAMQLSWCERNGPPARVPDHQGFGTRLIEMLGKQLNGKVALS
CCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEE
YETAGFAYRLDAPLASLMATPQD
EECCCEEEEECCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA