| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is fabG [H]
Identifier: 86749215
GI number: 86749215
Start: 2379551
End: 2380285
Strand: Reverse
Name: fabG [H]
Synonym: RPB_2094
Alternate gene names: 86749215
Gene position: 2380285-2379551 (Counterclockwise)
Preceding gene: 86749216
Following gene: 86749214
Centisome position: 44.64
GC content: 68.71
Gene sequence:
>735_bases ATGTCCGACCGACTGAAAGGCAAGCGCGCATTCGTCACGGCAGCGGCGGCGGGGATCGGCCGGGCGTCGGCGATCGCGTT CGTGCGCGAGGGCGCCGAGGTGTTCGCCACCGACATCGACGAGGCCGGGCTCGCCTCGCTCGCCAAGGAAGGCATCGGCG AAGCGGCGAAACTCGACGTACGCGACAGCGACGCGGTGGCCGCGATCGCAAAGCAGGTCGGCGCCGTCGACATCCTGCTC AACGCCGCGGGCTTCGTGCATCACGGCACCGTGCTCGACTGTTCGGACGCCGATTGGGACTTTTCGTTCGACCTCAACGT CAAGTCGATGCACCGCACCATCCGCGCGTTCCTGCCGGGGATGCTGGAGAAAGGCGGCGGTTCGATCGTCAACATCTCGT CCGCCGCCGGCGTCTTCAAGGCGGCGCCGAACCGCTACGTCTATGGCGCGACCAAAGCCGCGGTCGCAGCACTCACGCGC GCGATCGCCGCCGACTTCATCACCCGCGGCATCCGCTGCAACGCGATCTGCCCGGGCACGATCGAGACGCCGTCGATGCT CGGTCGCGCCGCCGCCGCGGGCCCTCAGGGCCGCGAGATGTTCGTGGCGCGCCAGCCGATGGGTCGGCTCGGCACCGCCG AGGAAATCGCAGCACTCGCGGTGTATCTCGCCAGCGACGAAAGCGCCTTCACCACCGGCGTCGCGCACATCATCGACGGC GGCTGGACGTTGTAA
Upstream 100 bases:
>100_bases CACCCCAGCCCTCTCCCCGCACGCGGGGCGAGGGAGCGCACCTCATGCGCGGCGAGGGCCAACACCTAGCTCAAGCAAGA AATGCACGAGAGGAAACACC
Downstream 100 bases:
>100_bases GGCTCTCTCAATGATTGGAGACCGTCATTGCGAGGAGCGAAGCGACGAAGCAATCCATAGCGCCGAGCACGTGCCGCGGG ATTGCTTCGCTTCGCTCGCA
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSDRLKGKRAFVTAAAAGIGRASAIAFVREGAEVFATDIDEAGLASLAKEGIGEAAKLDVRDSDAVAAIAKQVGAVDILL NAAGFVHHGTVLDCSDADWDFSFDLNVKSMHRTIRAFLPGMLEKGGGSIVNISSAAGVFKAAPNRYVYGATKAAVAALTR AIAADFITRGIRCNAICPGTIETPSMLGRAAAAGPQGREMFVARQPMGRLGTAEEIAALAVYLASDESAFTTGVAHIIDG GWTL
Sequences:
>Translated_244_residues MSDRLKGKRAFVTAAAAGIGRASAIAFVREGAEVFATDIDEAGLASLAKEGIGEAAKLDVRDSDAVAAIAKQVGAVDILL NAAGFVHHGTVLDCSDADWDFSFDLNVKSMHRTIRAFLPGMLEKGGGSIVNISSAAGVFKAAPNRYVYGATKAAVAALTR AIAADFITRGIRCNAICPGTIETPSMLGRAAAAGPQGREMFVARQPMGRLGTAEEIAALAVYLASDESAFTTGVAHIIDG GWTL >Mature_243_residues SDRLKGKRAFVTAAAAGIGRASAIAFVREGAEVFATDIDEAGLASLAKEGIGEAAKLDVRDSDAVAAIAKQVGAVDILLN AAGFVHHGTVLDCSDADWDFSFDLNVKSMHRTIRAFLPGMLEKGGGSIVNISSAAGVFKAAPNRYVYGATKAAVAALTRA IAADFITRGIRCNAICPGTIETPSMLGRAAAAGPQGREMFVARQPMGRLGTAEEIAALAVYLASDESAFTTGVAHIIDGG WTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI66933014, Length=243, Percent_Identity=55.1440329218107, Blast_Score=256, Evalue=2e-68, Organism=Homo sapiens, GI7705925, Length=240, Percent_Identity=32.0833333333333, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=32.2709163346614, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI15277342, Length=259, Percent_Identity=32.046332046332, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI59889578, Length=230, Percent_Identity=35.6521739130435, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI126723750, Length=253, Percent_Identity=28.4584980237154, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI10190704, Length=257, Percent_Identity=31.1284046692607, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI40254992, Length=239, Percent_Identity=29.7071129707113, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI142976729, Length=239, Percent_Identity=28.4518828451883, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI40807363, Length=190, Percent_Identity=32.6315789473684, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI126723191, Length=185, Percent_Identity=32.4324324324324, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI31542939, Length=196, Percent_Identity=33.6734693877551, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI19923817, Length=257, Percent_Identity=26.4591439688716, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI5031737, Length=241, Percent_Identity=29.045643153527, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI210032110, Length=189, Percent_Identity=26.4550264550265, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI109715829, Length=198, Percent_Identity=30.8080808080808, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI33667109, Length=191, Percent_Identity=32.4607329842932, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4504505, Length=190, Percent_Identity=29.4736842105263, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4503301, Length=196, Percent_Identity=29.5918367346939, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI302344755, Length=107, Percent_Identity=35.5140186915888, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI20149619, Length=195, Percent_Identity=29.7435897435897, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI25282469, Length=214, Percent_Identity=26.1682242990654, Blast_Score=64, Evalue=1e-10, Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=39.7637795275591, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1787335, Length=246, Percent_Identity=32.520325203252, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1789378, Length=257, Percent_Identity=33.4630350194552, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=29.8387096774194, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI87082160, Length=249, Percent_Identity=30.5220883534137, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1786812, Length=251, Percent_Identity=30.6772908366534, Blast_Score=98, Evalue=4e-22, Organism=Escherichia coli, GI1788459, Length=246, Percent_Identity=28.8617886178862, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI2367365, Length=241, Percent_Identity=33.195020746888, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI1787905, Length=247, Percent_Identity=32.3886639676113, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1790717, Length=249, Percent_Identity=28.9156626506024, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1787820, Length=184, Percent_Identity=33.695652173913, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI2367175, Length=240, Percent_Identity=32.0833333333333, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786701, Length=191, Percent_Identity=28.7958115183246, Blast_Score=67, Evalue=9e-13, Organism=Caenorhabditis elegans, GI25147288, Length=253, Percent_Identity=32.4110671936759, Blast_Score=114, Evalue=3e-26, Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=33.4677419354839, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=32.9365079365079, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=31.3253012048193, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI72000259, Length=263, Percent_Identity=31.5589353612167, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17555706, Length=248, Percent_Identity=31.4516129032258, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17563726, Length=261, Percent_Identity=31.4176245210728, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI115534694, Length=246, Percent_Identity=28.8617886178862, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17562990, Length=269, Percent_Identity=31.2267657992565, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI193204405, Length=265, Percent_Identity=29.811320754717, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17559104, Length=265, Percent_Identity=29.811320754717, Blast_Score=94, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17562908, Length=266, Percent_Identity=30.4511278195489, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17562910, Length=269, Percent_Identity=30.1115241635688, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17560150, Length=261, Percent_Identity=30.6513409961686, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17508895, Length=201, Percent_Identity=32.8358208955224, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17562906, Length=263, Percent_Identity=30.0380228136882, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17538480, Length=268, Percent_Identity=32.089552238806, Blast_Score=89, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17531453, Length=269, Percent_Identity=29.7397769516729, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17560676, Length=255, Percent_Identity=30.1960784313725, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17536025, Length=261, Percent_Identity=32.183908045977, Blast_Score=88, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=29.0566037735849, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17564282, Length=192, Percent_Identity=30.2083333333333, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17551412, Length=267, Percent_Identity=28.4644194756554, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17544670, Length=270, Percent_Identity=27.7777777777778, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI193203117, Length=191, Percent_Identity=29.8429319371728, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI193203115, Length=190, Percent_Identity=30, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17560220, Length=273, Percent_Identity=27.8388278388278, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17536651, Length=262, Percent_Identity=30.1526717557252, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17538486, Length=264, Percent_Identity=28.7878787878788, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17565030, Length=269, Percent_Identity=30.4832713754647, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17538182, Length=241, Percent_Identity=29.4605809128631, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17568967, Length=196, Percent_Identity=30.6122448979592, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17561272, Length=200, Percent_Identity=31.5, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17560332, Length=271, Percent_Identity=29.1512915129151, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17567345, Length=195, Percent_Identity=27.6923076923077, Blast_Score=68, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6324126, Length=256, Percent_Identity=30.078125, Blast_Score=86, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6323882, Length=243, Percent_Identity=28.3950617283951, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6322861, Length=252, Percent_Identity=23.015873015873, Blast_Score=62, Evalue=8e-11, Organism=Drosophila melanogaster, GI24639444, Length=248, Percent_Identity=34.2741935483871, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI21355319, Length=251, Percent_Identity=34.6613545816733, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI23397609, Length=255, Percent_Identity=31.7647058823529, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI21357041, Length=251, Percent_Identity=29.8804780876494, Blast_Score=104, Evalue=6e-23, Organism=Drosophila melanogaster, GI24644339, Length=248, Percent_Identity=29.8387096774194, Blast_Score=101, Evalue=5e-22, Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=30.6772908366534, Blast_Score=100, Evalue=9e-22, Organism=Drosophila melanogaster, GI24643142, Length=246, Percent_Identity=30.4878048780488, Blast_Score=95, Evalue=5e-20, Organism=Drosophila melanogaster, GI24644337, Length=251, Percent_Identity=34.2629482071713, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI281364892, Length=170, Percent_Identity=34.7058823529412, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI24640492, Length=270, Percent_Identity=27.4074074074074, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI24581726, Length=212, Percent_Identity=27.3584905660377, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24640442, Length=226, Percent_Identity=29.646017699115, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24649181, Length=192, Percent_Identity=28.6458333333333, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI18859837, Length=190, Percent_Identity=29.4736842105263, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI21355631, Length=170, Percent_Identity=28.2352941176471, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI17737361, Length=263, Percent_Identity=30.7984790874525, Blast_Score=68, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 25157; Mature: 25026
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRLKGKRAFVTAAAAGIGRASAIAFVREGAEVFATDIDEAGLASLAKEGIGEAAKLDV CCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHHEECCCCHHHHHHHHHHCCCCCEEECC RDSDAVAAIAKQVGAVDILLNAAGFVHHGTVLDCSDADWDFSFDLNVKSMHRTIRAFLPG CCCHHHHHHHHHHCHHHEEHHCCCCEECCCEEECCCCCCCEEEECCHHHHHHHHHHHHHH MLEKGGGSIVNISSAAGVFKAAPNRYVYGATKAAVAALTRAIAADFITRGIRCNAICPGT HHHCCCCCEEEECCCCCHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCEECEECCCC IETPSMLGRAAAAGPQGREMFVARQPMGRLGTAEEIAALAVYLASDESAFTTGVAHIIDG CCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHEEECCCCHHHHHHHHHHCC GWTL CCCC >Mature Secondary Structure SDRLKGKRAFVTAAAAGIGRASAIAFVREGAEVFATDIDEAGLASLAKEGIGEAAKLDV CCCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHHEECCCCHHHHHHHHHHCCCCCEEECC RDSDAVAAIAKQVGAVDILLNAAGFVHHGTVLDCSDADWDFSFDLNVKSMHRTIRAFLPG CCCHHHHHHHHHHCHHHEEHHCCCCEECCCEEECCCCCCCEEEECCHHHHHHHHHHHHHH MLEKGGGSIVNISSAAGVFKAAPNRYVYGATKAAVAALTRAIAADFITRGIRCNAICPGT HHHCCCCCEEEECCCCCHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCEECEECCCC IETPSMLGRAAAAGPQGREMFVARQPMGRLGTAEEIAALAVYLASDESAFTTGVAHIIDG CCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHEEECCCCHHHHHHHHHHCC GWTL CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]