Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86749082

Identifier: 86749082

GI number: 86749082

Start: 2225850

End: 2227340

Strand: Direct

Name: 86749082

Synonym: RPB_1959

Alternate gene names: NA

Gene position: 2225850-2227340 (Clockwise)

Preceding gene: 86749075

Following gene: 86749085

Centisome position: 41.75

GC content: 71.23

Gene sequence:

>1491_bases
ATGACGATCCTCACCGCCGATTCGAGCGACCTCGCCGGCGCACGGCACAGCGCCGCGCTGCCGCTGTGGATCGGGGTCGC
GGTCTACGCCTTCCTGCTGGTCTCCGGCGACCGGCTGCTGAACGATCCCGATACGCTGTGGCAGGTCACGCTGGGGCAGT
GGATCATCGACCATCGCGCGGTGCCGCAGGTCGACGTCTATTCCTTCACCATGGCCGGGCAGCCGTGGATCTCGACGCAA
TGGCTGTCGCAGGTGCTACTGGCGGCGAGCTACCAACTCGCCGGCTGGGCCGGGCCGGTGGTGCTGTCGGCCGCGGCGCT
GGCGGCGACCTTCATGCTTTATGCGCGCTGGCTCGGCCAGCGGCTGCGCGGCAGTACCGCGCTGGTGTTCGTCGCCGCGG
CGGTGGCGCTGATGGCGCCGCATATGCTGGCGCGGCCGCACGTGCTGGCGATGCCGGTGATGGTGGCATGGGTCGGCGCG
CTGATGGCGGCCGCCGATCGCCGCGCCGCGCCGTCGTTCTGGCTGCTGCCGCTGATGGTGCTGTGGGCCAATCTGCACGG
CGGCTTCGTGCTCGGCATCGCGCTGGTGGCGCCGATCGCGCTCGACGCGGTGCTGGCGGCGGCGCCGTCGCGCCGCGTTT
CGCTGCTGCTGCGCTGGGGTGCGTTCGGCGTCGCCGCGCTGATCGTGAGCTGCGCCAATCCGTACGGCTGGAACGCGATC
CTGGCGTCGCAGCGCATCCTGTCGCTCGGCGCGGCGCTGGCGACGATCGGCGAATGGGCGCCGGTGAATTTCTCGCGGGT
CGGGGCGTTCGAGGTTGCGCTGCTGGGAGGTCTCGGCCTCGCTTTGTGGCGCGGCGTGACGCTGCCGCCGGTGCGCATCC
TGCTGCTGCTCGGCCTCGTGCACATGGCGCTGAGCGCCAACCGCAACATCGAAGTGCTGGCGCTGCTCGCGCCGCTGATC
ATCGCGGCGCCGCTGGCCCGGCAGATCGGCGGCGCCGAAGCGCGCGGCGAGGCGCCGGCGCGCCTCTCGGTCGGCGCGGT
GGCCGCGGCGATCGCGCTCACGCTCGGCGGCACGCTGGCGTTCGCCTCGCTGCATCGCTTCGCGCCGCATCCGGCGAATT
CGCCGGCGGCGGCGGTGGCCGAGCTGAAGACGCTCGGCGTGCAGCGGGTGTTCAACGATTACGATTTCGGCGGCTACCTG
ATCGCCAACGGCGTCGCGCCGTTCATCGACGGCCGCACCGAACTGTACGGCGAGGCCTTCGTGGTCGAACAGAATTCCGC
GGTGCGGCTGAAGCCGCCGGAGAAACTGTTCCGACTGCTCGCGGACTACGACATCGACGCCACGCTGCTCCGCACCGAGG
ACGCGGCCACCCATCTGCTCGATCACATCGACGGCTGGCAGAAGGTGTATTCCGACGACGTCGCGACCATCCATTTGCGC
CGGCCGGGCGCGCTGCACGGCGCCGCGCCGAAGGTCACGCCCGCGAACTGA

Upstream 100 bases:

>100_bases
GGGAGCTTGTTCCATCGGCCCGACAGCGCGGCCGGTTTACTTCAAATTATCCGGCCGCGTGTTTGATCGGCGTAGCTTCA
GCCACGACCGGACACCGCCG

Downstream 100 bases:

>100_bases
TCGGGACGCCGGCTCACGCGGCGCCGCTGTCCTGCTGCTGTCCGGGGAGGTCGAGCCGCACGATCAGGCCGTGCGGCTTG
CGGTCGCGCAGCGTCAGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 496; Mature: 495

Protein sequence:

>496_residues
MTILTADSSDLAGARHSAALPLWIGVAVYAFLLVSGDRLLNDPDTLWQVTLGQWIIDHRAVPQVDVYSFTMAGQPWISTQ
WLSQVLLAASYQLAGWAGPVVLSAAALAATFMLYARWLGQRLRGSTALVFVAAAVALMAPHMLARPHVLAMPVMVAWVGA
LMAAADRRAAPSFWLLPLMVLWANLHGGFVLGIALVAPIALDAVLAAAPSRRVSLLLRWGAFGVAALIVSCANPYGWNAI
LASQRILSLGAALATIGEWAPVNFSRVGAFEVALLGGLGLALWRGVTLPPVRILLLLGLVHMALSANRNIEVLALLAPLI
IAAPLARQIGGAEARGEAPARLSVGAVAAAIALTLGGTLAFASLHRFAPHPANSPAAAVAELKTLGVQRVFNDYDFGGYL
IANGVAPFIDGRTELYGEAFVVEQNSAVRLKPPEKLFRLLADYDIDATLLRTEDAATHLLDHIDGWQKVYSDDVATIHLR
RPGALHGAAPKVTPAN

Sequences:

>Translated_496_residues
MTILTADSSDLAGARHSAALPLWIGVAVYAFLLVSGDRLLNDPDTLWQVTLGQWIIDHRAVPQVDVYSFTMAGQPWISTQ
WLSQVLLAASYQLAGWAGPVVLSAAALAATFMLYARWLGQRLRGSTALVFVAAAVALMAPHMLARPHVLAMPVMVAWVGA
LMAAADRRAAPSFWLLPLMVLWANLHGGFVLGIALVAPIALDAVLAAAPSRRVSLLLRWGAFGVAALIVSCANPYGWNAI
LASQRILSLGAALATIGEWAPVNFSRVGAFEVALLGGLGLALWRGVTLPPVRILLLLGLVHMALSANRNIEVLALLAPLI
IAAPLARQIGGAEARGEAPARLSVGAVAAAIALTLGGTLAFASLHRFAPHPANSPAAAVAELKTLGVQRVFNDYDFGGYL
IANGVAPFIDGRTELYGEAFVVEQNSAVRLKPPEKLFRLLADYDIDATLLRTEDAATHLLDHIDGWQKVYSDDVATIHLR
RPGALHGAAPKVTPAN
>Mature_495_residues
TILTADSSDLAGARHSAALPLWIGVAVYAFLLVSGDRLLNDPDTLWQVTLGQWIIDHRAVPQVDVYSFTMAGQPWISTQW
LSQVLLAASYQLAGWAGPVVLSAAALAATFMLYARWLGQRLRGSTALVFVAAAVALMAPHMLARPHVLAMPVMVAWVGAL
MAAADRRAAPSFWLLPLMVLWANLHGGFVLGIALVAPIALDAVLAAAPSRRVSLLLRWGAFGVAALIVSCANPYGWNAIL
ASQRILSLGAALATIGEWAPVNFSRVGAFEVALLGGLGLALWRGVTLPPVRILLLLGLVHMALSANRNIEVLALLAPLII
AAPLARQIGGAEARGEAPARLSVGAVAAAIALTLGGTLAFASLHRFAPHPANSPAAAVAELKTLGVQRVFNDYDFGGYLI
ANGVAPFIDGRTELYGEAFVVEQNSAVRLKPPEKLFRLLADYDIDATLLRTEDAATHLLDHIDGWQKVYSDDVATIHLRR
PGALHGAAPKVTPAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52503; Mature: 52372

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILTADSSDLAGARHSAALPLWIGVAVYAFLLVSGDRLLNDPDTLWQVTLGQWIIDHRA
CEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHCCC
VPQVDVYSFTMAGQPWISTQWLSQVLLAASYQLAGWAGPVVLSAAALAATFMLYARWLGQ
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
RLRGSTALVFVAAAVALMAPHMLARPHVLAMPVMVAWVGALMAAADRRAAPSFWLLPLMV
HHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LWANLHGGFVLGIALVAPIALDAVLAAAPSRRVSLLLRWGAFGVAALIVSCANPYGWNAI
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LASQRILSLGAALATIGEWAPVNFSRVGAFEVALLGGLGLALWRGVTLPPVRILLLLGLV
HHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
HMALSANRNIEVLALLAPLIIAAPLARQIGGAEARGEAPARLSVGAVAAAIALTLGGTLA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FASLHRFAPHPANSPAAAVAELKTLGVQRVFNDYDFGGYLIANGVAPFIDGRTELYGEAF
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHCCCHHHCCCEE
VVEQNSAVRLKPPEKLFRLLADYDIDATLLRTEDAATHLLDHIDGWQKVYSDDVATIHLR
EEECCCEEEECCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEE
RPGALHGAAPKVTPAN
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TILTADSSDLAGARHSAALPLWIGVAVYAFLLVSGDRLLNDPDTLWQVTLGQWIIDHRA
EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHCCC
VPQVDVYSFTMAGQPWISTQWLSQVLLAASYQLAGWAGPVVLSAAALAATFMLYARWLGQ
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
RLRGSTALVFVAAAVALMAPHMLARPHVLAMPVMVAWVGALMAAADRRAAPSFWLLPLMV
HHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LWANLHGGFVLGIALVAPIALDAVLAAAPSRRVSLLLRWGAFGVAALIVSCANPYGWNAI
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LASQRILSLGAALATIGEWAPVNFSRVGAFEVALLGGLGLALWRGVTLPPVRILLLLGLV
HHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
HMALSANRNIEVLALLAPLIIAAPLARQIGGAEARGEAPARLSVGAVAAAIALTLGGTLA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FASLHRFAPHPANSPAAAVAELKTLGVQRVFNDYDFGGYLIANGVAPFIDGRTELYGEAF
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHCCCHHHCCCEE
VVEQNSAVRLKPPEKLFRLLADYDIDATLLRTEDAATHLLDHIDGWQKVYSDDVATIHLR
EEECCCEEEECCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEE
RPGALHGAAPKVTPAN
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA