| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yegJ [C]
Identifier: 86749070
GI number: 86749070
Start: 2214683
End: 2215177
Strand: Reverse
Name: yegJ [C]
Synonym: RPB_1947
Alternate gene names: 86749070
Gene position: 2215177-2214683 (Counterclockwise)
Preceding gene: 86749073
Following gene: 86749067
Centisome position: 41.55
GC content: 65.45
Gene sequence:
>495_bases ATGTTGCTGTGGGTGCTGATTTCGTTACTTGCCGTTGTCGCCGCGCCGAGTCGGGCGCAGTCGCTGATCGACAAGGCCGC GCGCGACGAGATCGCCCGCGTCAAGAGCGGCGATCCGGAGATGGCCGCGGCGATCGCCAAGGCGCGCGCCGGGCTCGATG GGTTTCTCGCCCGCGCCGATCATCCGGCCGGCAATCAGCGCGACTTCGCGGTCAAGGTGAAAGTCCCGCTCGGCGCCAAT GCGGAGTATCTGTGGCTGCGCCCGTTCGTTCGCGACGGCGACGGCTTCATCGGCCGCGTCGTCAACACGCCGCGCAACAT CGCCAAACTGAAATACGGCGACCGCCTCGCCTTCGAACGCAAGGACATCGCAGACTGGTCCTACAAGCAGGACGATCGCG TGATCGGCAATTTCACCGCCTGTGTGCTGATCGCGCGCGAGCCGGCAAATCAGCGCGCCGCGTTCCGCGACCAATACGGG ATCGATTGCGAGTGA
Upstream 100 bases:
>100_bases ACGGTAAAATTCTTAACTACTCGCCCTTCTTGACAATCGGAACATATCATGAACAATTAGCTTGGCAAGTTTTCAAACGA AGTTTTTCTTGGAGGCGTCG
Downstream 100 bases:
>100_bases GCATCGGGAGGACACTGGTCGGACGCGGCTGGCGTTCGACCGCCCCCCCACCATTCGCGTTCCCTTCACGAGGTGTTAAC CAAGCCCGCAACGGCACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MLLWVLISLLAVVAAPSRAQSLIDKAARDEIARVKSGDPEMAAAIAKARAGLDGFLARADHPAGNQRDFAVKVKVPLGAN AEYLWLRPFVRDGDGFIGRVVNTPRNIAKLKYGDRLAFERKDIADWSYKQDDRVIGNFTACVLIAREPANQRAAFRDQYG IDCE
Sequences:
>Translated_164_residues MLLWVLISLLAVVAAPSRAQSLIDKAARDEIARVKSGDPEMAAAIAKARAGLDGFLARADHPAGNQRDFAVKVKVPLGAN AEYLWLRPFVRDGDGFIGRVVNTPRNIAKLKYGDRLAFERKDIADWSYKQDDRVIGNFTACVLIAREPANQRAAFRDQYG IDCE >Mature_164_residues MLLWVLISLLAVVAAPSRAQSLIDKAARDEIARVKSGDPEMAAAIAKARAGLDGFLARADHPAGNQRDFAVKVKVPLGAN AEYLWLRPFVRDGDGFIGRVVNTPRNIAKLKYGDRLAFERKDIADWSYKQDDRVIGNFTACVLIAREPANQRAAFRDQYG IDCE
Specific function: Unknown
COG id: COG3779
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18114; Mature: 18114
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLWVLISLLAVVAAPSRAQSLIDKAARDEIARVKSGDPEMAAAIAKARAGLDGFLARAD CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCCC HPAGNQRDFAVKVKVPLGANAEYLWLRPFVRDGDGFIGRVVNTPRNIAKLKYGDRLAFER CCCCCCCCEEEEEEECCCCCCCEEEEECEEECCCCEEEHHHCCCHHHHHHCCCCCCCCCC KDIADWSYKQDDRVIGNFTACVLIAREPANQRAAFRDQYGIDCE CCCCCCCCCCCCCEECCEEEEEEEECCCCCCHHHHHHCCCCCCC >Mature Secondary Structure MLLWVLISLLAVVAAPSRAQSLIDKAARDEIARVKSGDPEMAAAIAKARAGLDGFLARAD CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCCC HPAGNQRDFAVKVKVPLGANAEYLWLRPFVRDGDGFIGRVVNTPRNIAKLKYGDRLAFER CCCCCCCCEEEEEEECCCCCCCEEEEECEEECCCCEEEHHHCCCHHHHHHCCCCCCCCCC KDIADWSYKQDDRVIGNFTACVLIAREPANQRAAFRDQYGIDCE CCCCCCCCCCCCCEECCEEEEEEEECCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA