| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yegJ [C]
Identifier: 86749067
GI number: 86749067
Start: 2212204
End: 2212734
Strand: Reverse
Name: yegJ [C]
Synonym: RPB_1944
Alternate gene names: 86749067
Gene position: 2212734-2212204 (Counterclockwise)
Preceding gene: 86749070
Following gene: 86749066
Centisome position: 41.5
GC content: 68.36
Gene sequence:
>531_bases ATGACGCGCCGGACTTTTGCGCTGGCGGCCGTCGGGCTGCTGCTCTCGGCCCTCCCGCCTGCCGGTGCGGGCAATTTGCT CGAGCGGGTCGAGCGCGACGAACTTCGCTACGTGCCCGACGACGACCCGGTGATGCAGGCGGCGATCGCCAAGGCCCGCG CCGCCCTGCCCGACTTCCTGGCAAAGGCCGCGCGCCCGCGGATCAACCAGCGCGCCTTCGCGCTGAAGGTGGAGGTCAGG CTCACCGATGGCCGCAGCGAATTCCTGTGGGTCACGCGCTTCGCGAACCAGGGCGACGATTTCATCGGCGTGGTCGATAA CGAGCCGCGGCTGGTGCCAAACCTGAAACGCGGCGGCTATCTGGTGTTCAAGCGCGACGAGATCGCCGACTGGCTCTATC TCGAAGGCGACCGGATGATCGGCAACGCTACGCTGTGCGCCATGACCGCCTCGGTGCCGGAGGACCGCCGCATCGCCCGC GAGCAATTCGGCCTCGATTGCGACGACGCACCATCCGCAGCGCCGCGATGA
Upstream 100 bases:
>100_bases GAAGTCCGGGGAATGACCGACTTGACGACAGGAACAAATCGGAAACAAAATAGCAGCAGTTCCTTGATGCATTTGTTGTT GCTTGTTTCTGGAGGGCGCC
Downstream 100 bases:
>100_bases GCAACGCCGCCACCGCCCTGATCGTGACGCCGGAGGGCGACCATGTCACCGGCCGTTGCGCCTGCTGCGGCAGAGTCAGC CGCTGTGTGTGGGGCACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MTRRTFALAAVGLLLSALPPAGAGNLLERVERDELRYVPDDDPVMQAAIAKARAALPDFLAKAARPRINQRAFALKVEVR LTDGRSEFLWVTRFANQGDDFIGVVDNEPRLVPNLKRGGYLVFKRDEIADWLYLEGDRMIGNATLCAMTASVPEDRRIAR EQFGLDCDDAPSAAPR
Sequences:
>Translated_176_residues MTRRTFALAAVGLLLSALPPAGAGNLLERVERDELRYVPDDDPVMQAAIAKARAALPDFLAKAARPRINQRAFALKVEVR LTDGRSEFLWVTRFANQGDDFIGVVDNEPRLVPNLKRGGYLVFKRDEIADWLYLEGDRMIGNATLCAMTASVPEDRRIAR EQFGLDCDDAPSAAPR >Mature_175_residues TRRTFALAAVGLLLSALPPAGAGNLLERVERDELRYVPDDDPVMQAAIAKARAALPDFLAKAARPRINQRAFALKVEVRL TDGRSEFLWVTRFANQGDDFIGVVDNEPRLVPNLKRGGYLVFKRDEIADWLYLEGDRMIGNATLCAMTASVPEDRRIARE QFGLDCDDAPSAAPR
Specific function: Unknown
COG id: COG3779
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788386, Length=117, Percent_Identity=30.7692307692308, Blast_Score=66, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19514; Mature: 19382
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRTFALAAVGLLLSALPPAGAGNLLERVERDELRYVPDDDPVMQAAIAKARAALPDFL CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH AKAARPRINQRAFALKVEVRLTDGRSEFLWVTRFANQGDDFIGVVDNEPRLVPNLKRGGY HHHHCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCE LVFKRDEIADWLYLEGDRMIGNATLCAMTASVPEDRRIAREQFGLDCDDAPSAAPR EEEECCCCCCEEEEECCEEECCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TRRTFALAAVGLLLSALPPAGAGNLLERVERDELRYVPDDDPVMQAAIAKARAALPDFL CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH AKAARPRINQRAFALKVEVRLTDGRSEFLWVTRFANQGDDFIGVVDNEPRLVPNLKRGGY HHHHCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCE LVFKRDEIADWLYLEGDRMIGNATLCAMTASVPEDRRIAREQFGLDCDDAPSAAPR EEEECCCCCCEEEEECCEEECCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA