Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86749062
Identifier: 86749062
GI number: 86749062
Start: 2207971
End: 2208315
Strand: Direct
Name: 86749062
Synonym: RPB_1939
Alternate gene names: NA
Gene position: 2207971-2208315 (Clockwise)
Preceding gene: 86749059
Following gene: 86749065
Centisome position: 41.41
GC content: 58.55
Gene sequence:
>345_bases ATGGAAGCGAAAGACGTCGCAACGATGAATGCGTTGCCCCAAGCGAGTTCGTGCCGGCTGATCGACTTCGACGAAGTCGT CGTGGTCCCCGGGTTCGTACCCAAGACCTTCATCCTGATCGTCAGCGGCACCAAACCGTGGGTCACGATGACGGTCGAAC TTCGGCCGCTGGTCTACATTCGACAGCCGGAATACTGGGGAATCGAAGTTGTGGGCTGTCAAAGCGGAATCGGATTGCCG CAGACGGCGCCGTACTCCGTCACCCTGGATATCACCTCGGTGCTCGGGACAAAGGGGATCGAGGTGATCGGCGCGACGGG AAAAAAGAAGGTCGACGTTTCGTAG
Upstream 100 bases:
>100_bases ACAAATGCTCGTGCCGACGGCGTGATCCATGTCGCCCATTGTTCGAAGGGGATCGGTTTCACCGATTGCGGAGCACATAT TTCAAACTCGGAGAATTGCC
Downstream 100 bases:
>100_bases CAGGCCGCGACGGGCCGTTGCAATCCCGACGGCTCGTTCGCTACTACTCGGCCGCGTCGCTGCGCGACGGTGCCGCGGCC GGAGCGCTGCTTGCGGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MEAKDVATMNALPQASSCRLIDFDEVVVVPGFVPKTFILIVSGTKPWVTMTVELRPLVYIRQPEYWGIEVVGCQSGIGLP QTAPYSVTLDITSVLGTKGIEVIGATGKKKVDVS
Sequences:
>Translated_114_residues MEAKDVATMNALPQASSCRLIDFDEVVVVPGFVPKTFILIVSGTKPWVTMTVELRPLVYIRQPEYWGIEVVGCQSGIGLP QTAPYSVTLDITSVLGTKGIEVIGATGKKKVDVS >Mature_114_residues MEAKDVATMNALPQASSCRLIDFDEVVVVPGFVPKTFILIVSGTKPWVTMTVELRPLVYIRQPEYWGIEVVGCQSGIGLP QTAPYSVTLDITSVLGTKGIEVIGATGKKKVDVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12268; Mature: 12268
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAKDVATMNALPQASSCRLIDFDEVVVVPGFVPKTFILIVSGTKPWVTMTVELRPLVYI CCCCCCEEECCCCCCCCCEEEECCCEEEECCCCCCEEEEEEECCCCEEEEEEEEEEEEEE RQPEYWGIEVVGCQSGIGLPQTAPYSVTLDITSVLGTKGIEVIGATGKKKVDVS ECCCCCCEEEEEECCCCCCCCCCCEEEEEEEEHHCCCCCEEEEECCCCEEEECC >Mature Secondary Structure MEAKDVATMNALPQASSCRLIDFDEVVVVPGFVPKTFILIVSGTKPWVTMTVELRPLVYI CCCCCCEEECCCCCCCCCEEEECCCEEEECCCCCCEEEEEEECCCCEEEEEEEEEEEEEE RQPEYWGIEVVGCQSGIGLPQTAPYSVTLDITSVLGTKGIEVIGATGKKKVDVS ECCCCCCEEEEEECCCCCCCCCCCEEEEEEEEHHCCCCCEEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA