Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86749065

Identifier: 86749065

GI number: 86749065

Start: 2211273

End: 2211701

Strand: Direct

Name: 86749065

Synonym: RPB_1942

Alternate gene names: NA

Gene position: 2211273-2211701 (Clockwise)

Preceding gene: 86749062

Following gene: 86749068

Centisome position: 41.47

GC content: 72.26

Gene sequence:

>429_bases
ATGCGTCGACTGTTCGGAATTGCGTTTGCCCTGATCCTGGCCGCGACCGCCGGCGCCGGCGCGGCGCGCGCCGCGGAGGG
CCGGATCGCGCTCACCATCTTCAAGGGCGGCTGGATCATCGGCGGCTCGGGCGGCTCCGGCACGTTGAGCTTCAACGGCC
GTCGCTACCCGCTGTCGATCGGCGGGCTGTCCTACGGGCTGGTGTTCGGCGGCTCCAAGGCCGAACTGGTCGGCCGCGTC
AGCAACATCCGCAGCGCCAGCGACGTCGCCGGCATCTACGGCGCCGCCGGGGCGGGCGCCGCGATCGGCGTCGGCGCCCG
CGCCATCGTGCTGCGCAACGAGAAGGGCGCCGTGCTCGAACTGTCCGGACGCCAAGTCGGCCTGATCGCCAACCTCGACC
TCAGCGGTCTGGCGATCGGGCTGCGCTAG

Upstream 100 bases:

>100_bases
CGGCATTGCCTGGTCTGCTATGGTCGCGGCATCGAATCGCCGCGCTGTTGGCGCGCGACGGCCGGCTGCGAGGCCGCGCG
CCGATTGGGAGGAGACAACC

Downstream 100 bases:

>100_bases
GCGAGGCGCGGCGGAACGCAGGCGAGCGCATACTGGGGCGGGCGCTAGCGTGGCAGGGGGCATCGTCACGCCGCGGTGCC
TCGCAATTCGGCGAGCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MRRLFGIAFALILAATAGAGAARAAEGRIALTIFKGGWIIGGSGGSGTLSFNGRRYPLSIGGLSYGLVFGGSKAELVGRV
SNIRSASDVAGIYGAAGAGAAIGVGARAIVLRNEKGAVLELSGRQVGLIANLDLSGLAIGLR

Sequences:

>Translated_142_residues
MRRLFGIAFALILAATAGAGAARAAEGRIALTIFKGGWIIGGSGGSGTLSFNGRRYPLSIGGLSYGLVFGGSKAELVGRV
SNIRSASDVAGIYGAAGAGAAIGVGARAIVLRNEKGAVLELSGRQVGLIANLDLSGLAIGLR
>Mature_142_residues
MRRLFGIAFALILAATAGAGAARAAEGRIALTIFKGGWIIGGSGGSGTLSFNGRRYPLSIGGLSYGLVFGGSKAELVGRV
SNIRSASDVAGIYGAAGAGAAIGVGARAIVLRNEKGAVLELSGRQVGLIANLDLSGLAIGLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14058; Mature: 14058

Theoretical pI: Translated: 11.87; Mature: 11.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLFGIAFALILAATAGAGAARAAEGRIALTIFKGGWIIGGSGGSGTLSFNGRRYPLSI
CCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCEEEECCCCCEEEEECCEEEEEEE
GGLSYGLVFGGSKAELVGRVSNIRSASDVAGIYGAAGAGAAIGVGARAIVLRNEKGAVLE
CCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCEEEEEEECCCCCEEE
LSGRQVGLIANLDLSGLAIGLR
ECCCEEEEEEECCCCCEEEECC
>Mature Secondary Structure
MRRLFGIAFALILAATAGAGAARAAEGRIALTIFKGGWIIGGSGGSGTLSFNGRRYPLSI
CCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCEEEECCCCCEEEEECCEEEEEEE
GGLSYGLVFGGSKAELVGRVSNIRSASDVAGIYGAAGAGAAIGVGARAIVLRNEKGAVLE
CCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCEEEEEEECCCCCEEE
LSGRQVGLIANLDLSGLAIGLR
ECCCEEEEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA