Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86749059
Identifier: 86749059
GI number: 86749059
Start: 2205628
End: 2205894
Strand: Direct
Name: 86749059
Synonym: RPB_1936
Alternate gene names: NA
Gene position: 2205628-2205894 (Clockwise)
Preceding gene: 86749055
Following gene: 86749062
Centisome position: 41.37
GC content: 67.04
Gene sequence:
>267_bases ATGTGCCGGAATATCAAGACGCTGTTCAACTTCGAGCCGCCGGCGACCGAGGATGAAATCCGCGCCTCGGCGCTGCAATT CGTCCGCAAGCTGTCGGGGTTCAACACGCCGTCGCAGGCCAACGCAGCGGCGTTCGCGCGCGCGGTCGACGACGTCGCCG ATGTCGCGCGGACGTTACTGGCGTCGCTGCAGACGCAGGCCGAGCCGCGCAACCGGGACGTCGAGGCAGAGAAGGCAAGA GAGCGCTCGCGCGCGCGATTCGGTTAG
Upstream 100 bases:
>100_bases ACGGCGATCACAAGAGCTGCGTGCGAGATCGGTTCCACATTGCGCGCCCGGCGTTCGGCGTTACGCTCGCACGCGAGCGT ACCAATGTCGGAGGTCGAGC
Downstream 100 bases:
>100_bases CGCGCGCGGCTTCACTCAATCCTTGTGCTTGCGCTTCTTCTTTTTCTTGCCGTCGGGCCGCTCGTCGTCGTCGTCGCGTT CATCGTCGTCGGCGTGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MCRNIKTLFNFEPPATEDEIRASALQFVRKLSGFNTPSQANAAAFARAVDDVADVARTLLASLQTQAEPRNRDVEAEKAR ERSRARFG
Sequences:
>Translated_88_residues MCRNIKTLFNFEPPATEDEIRASALQFVRKLSGFNTPSQANAAAFARAVDDVADVARTLLASLQTQAEPRNRDVEAEKAR ERSRARFG >Mature_88_residues MCRNIKTLFNFEPPATEDEIRASALQFVRKLSGFNTPSQANAAAFARAVDDVADVARTLLASLQTQAEPRNRDVEAEKAR ERSRARFG
Specific function: Unknown
COG id: COG5552
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9782; Mature: 9782
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRNIKTLFNFEPPATEDEIRASALQFVRKLSGFNTPSQANAAAFARAVDDVADVARTLL CCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH ASLQTQAEPRNRDVEAEKARERSRARFG HHHHHHCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MCRNIKTLFNFEPPATEDEIRASALQFVRKLSGFNTPSQANAAAFARAVDDVADVARTLL CCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH ASLQTQAEPRNRDVEAEKARERSRARFG HHHHHHCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA