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The map label for this gene is yqhA [C]

Identifier: 86749046

GI number: 86749046

Start: 2195941

End: 2196534

Strand: Direct

Name: yqhA [C]

Synonym: RPB_1923

Alternate gene names: 86749046

Gene position: 2195941-2196534 (Clockwise)

Preceding gene: 86749045

Following gene: 86749047

Centisome position: 41.19

GC content: 62.29

Gene sequence:

>594_bases
ATGTCGATGACGCCCGAGACGCCGCTGCCGCCGAAAGGCGTGGGGCTGCGCCCGATTCCCATGCTGATCTTCGGCTCGCG
CTGGTTGCAGCTGCCGCTCTATGTCGGGCTGATCGTCGCCCAGGGCATCTACGTCGTGCTGTTCCTCAAGGAGCTGTGGC
ATCTGTTTCAGCACTCGTTCGATTTCAGCGAGCAGCAGATCATGCTGGCGGTGCTGGGGCTGATCGACGTGGTGATGATC
TCCAACCTGCTGGTGATGGTGATCGTGGGCGGCTACGAGACCTTCGTGTCGCGGCTCAACCTGCAGGGGCATCCCGACGA
GCCGGAATGGCTCAGCCACGTCAATGCCAGCGTGCTGAAGATCAAGCTGGCGATGGCGATCATCGGCATCTCGTCGATCC
ATCTGCTGCGCACCTTCATCGAGGCGGGGACCCTCGGCGCGCCGGGTCGGGCCGGCGGCTACACCGAGACCGGTGTGATG
TGGCAGACCATCATCCACACCATCTTCATCCTGTCGGCGATCGGCATCGCGGTGGTCGACCGGATATCGAACCAGGCGAT
CGACGAAGCGAAGACTCATTCCGGGAAACATTGA

Upstream 100 bases:

>100_bases
TCGCCAGCTGCGGTTAATCGCCGCTCCCCGGCGTCTCGACAGAATCGCACGGAGTTCCCACTTGAGAGGTCCCCGATTTC
CCCCGCCTGGAGCTTCCCCC

Downstream 100 bases:

>100_bases
CGATGCGGGTCGTCGCCGCTGTCGCCGCGATTGGCGCGGCGCTGTGGTTGACGCTGGTCCCGGCCGCCGCACAGGCGGCC
GATGCCGGCTTCACGCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSMTPETPLPPKGVGLRPIPMLIFGSRWLQLPLYVGLIVAQGIYVVLFLKELWHLFQHSFDFSEQQIMLAVLGLIDVVMI
SNLLVMVIVGGYETFVSRLNLQGHPDEPEWLSHVNASVLKIKLAMAIIGISSIHLLRTFIEAGTLGAPGRAGGYTETGVM
WQTIIHTIFILSAIGIAVVDRISNQAIDEAKTHSGKH

Sequences:

>Translated_197_residues
MSMTPETPLPPKGVGLRPIPMLIFGSRWLQLPLYVGLIVAQGIYVVLFLKELWHLFQHSFDFSEQQIMLAVLGLIDVVMI
SNLLVMVIVGGYETFVSRLNLQGHPDEPEWLSHVNASVLKIKLAMAIIGISSIHLLRTFIEAGTLGAPGRAGGYTETGVM
WQTIIHTIFILSAIGIAVVDRISNQAIDEAKTHSGKH
>Mature_196_residues
SMTPETPLPPKGVGLRPIPMLIFGSRWLQLPLYVGLIVAQGIYVVLFLKELWHLFQHSFDFSEQQIMLAVLGLIDVVMIS
NLLVMVIVGGYETFVSRLNLQGHPDEPEWLSHVNASVLKIKLAMAIIGISSIHLLRTFIEAGTLGAPGRAGGYTETGVMW
QTIIHTIFILSAIGIAVVDRISNQAIDEAKTHSGKH

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family [H]

Homologues:

Organism=Escherichia coli, GI1789376, Length=169, Percent_Identity=35.5029585798817, Blast_Score=113, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765 [H]

Pfam domain/function: PF03350 UPF0114 [H]

EC number: NA

Molecular weight: Translated: 21663; Mature: 21532

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMTPETPLPPKGVGLRPIPMLIFGSRWLQLPLYVGLIVAQGIYVVLFLKELWHLFQHSF
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DFSEQQIMLAVLGLIDVVMISNLLVMVIVGGYETFVSRLNLQGHPDEPEWLSHVNASVLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
IKLAMAIIGISSIHLLRTFIEAGTLGAPGRAGGYTETGVMWQTIIHTIFILSAIGIAVVD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RISNQAIDEAKTHSGKH
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SMTPETPLPPKGVGLRPIPMLIFGSRWLQLPLYVGLIVAQGIYVVLFLKELWHLFQHSF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DFSEQQIMLAVLGLIDVVMISNLLVMVIVGGYETFVSRLNLQGHPDEPEWLSHVNASVLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
IKLAMAIIGISSIHLLRTFIEAGTLGAPGRAGGYTETGVMWQTIIHTIFILSAIGIAVVD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RISNQAIDEAKTHSGKH
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]