Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is mltB [H]
Identifier: 86749047
GI number: 86749047
Start: 2196537
End: 2197772
Strand: Direct
Name: mltB [H]
Synonym: RPB_1924
Alternate gene names: 86749047
Gene position: 2196537-2197772 (Clockwise)
Preceding gene: 86749046
Following gene: 86749054
Centisome position: 41.2
GC content: 68.04
Gene sequence:
>1236_bases ATGCGGGTCGTCGCCGCTGTCGCCGCGATTGGCGCGGCGCTGTGGTTGACGCTGGTCCCGGCCGCCGCACAGGCGGCCGA TGCCGGCTTCACGCGCTTCGTCGCCTCGCTGTGGCCCGAGGCGCAGCAGGCGGGCGTTTCCCGCGCGACCTTCGATGCCG TAACGGCGGGGCTCGAGCCGGACTACAAGTTGCCGGACCTGATCCTGCCGGGACGGCCGAAGACCGGGGCGCCGTCCCAG GCCGAGTTCGTGCAGGTGCCGGCCGACTATCTCAAGGAAGCGCGGATCGAAAGTCTGGCCGCATACGGCCGCGGCCTGCT GCAGAAATATCGCCCCACGCTCGCCGCGATCGAGCAGCGCTTCGGCGTGCCGGCGACGGTGGTTCTGGCGATCTGGGGTC GCGAGACCGATTTCGGCCGGCACAGGCTGCCCTATGATGCCGTCCGCGTGCTGGCGACGCAGGCCTATGTCGGACGTCGC AAGGAGCAGTACCGCCTCGAGCTGATCGCGGCCTTGAAGCTGATCAGCGACGGCGTGGTGACGCGCGCCGACATGCGCTC GTCCTGGGCCGGCGCCACCGGGCTGACGCAGTTTCTGCCGACCGAACTCGACAAGCACGGCGTTGATTTCGATCGTGACG GCCGCGTCGATATCTGGCGCTCGGTGCCGGATGCGCTGGCGTCCGCCGCGCAGCAACTCGTCAACAAGGGCTGGAAGCCG GGCGTGCGTTGGGCTTACGAAGTCCGCGCACCGGCCAATGCCGATTGCACCCGGGGCGTGCCCGAAGTCAGCCAGCCGAT CGGGCAGTGGCTGCGCGAGGGATTTGCGCTGGCGCGCGGCGGCAAGCTCGGCGCCGGCGAACTGGCGGAGCCCGCGTCGC TGCTGCAGCCGGAGGGCATCTACGGTCCCGCCTTCCTGACGACGAACAACTATTTCGTCATCAAGCAGTACAATTTCTCC GACCTCTACGTGCTGTTCGTCGGCCATCTCGCCGACCGCATCACCGATCCGCGGCCGTTTGCGACGCCATGGGCGGCGAC GAAGCAGCTCCGCACCGCCGATGTCGAAACGATGCAAAACGAGCTGACGCGGCTGGGCTTCTACAACGACAAGATCGACG GCAAGGCCGGGATGCTGACCCGCGCCGCGCTCGGCGCCTATCAGAAGTCCGCGCGACTGAAGCTCGATTGCTGGCCGAGC GAAATGGTGCTGCGTTCGCTTCAGACCGCGCGGTAA
Upstream 100 bases:
>100_bases ACACCATCTTCATCCTGTCGGCGATCGGCATCGCGGTGGTCGACCGGATATCGAACCAGGCGATCGACGAAGCGAAGACT CATTCCGGGAAACATTGACG
Downstream 100 bases:
>100_bases CCGCCGCGGTCAGATGATCGCCCGGCGGACTTTCGCGGTGATCCATTCGCTGACGACCACGGTGGAGAGGATCATCAGCA GGATCAGCGAGACCTGCGGC
Product: lytic murein transglycosylase
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MRVVAAVAAIGAALWLTLVPAAAQAADAGFTRFVASLWPEAQQAGVSRATFDAVTAGLEPDYKLPDLILPGRPKTGAPSQ AEFVQVPADYLKEARIESLAAYGRGLLQKYRPTLAAIEQRFGVPATVVLAIWGRETDFGRHRLPYDAVRVLATQAYVGRR KEQYRLELIAALKLISDGVVTRADMRSSWAGATGLTQFLPTELDKHGVDFDRDGRVDIWRSVPDALASAAQQLVNKGWKP GVRWAYEVRAPANADCTRGVPEVSQPIGQWLREGFALARGGKLGAGELAEPASLLQPEGIYGPAFLTTNNYFVIKQYNFS DLYVLFVGHLADRITDPRPFATPWAATKQLRTADVETMQNELTRLGFYNDKIDGKAGMLTRAALGAYQKSARLKLDCWPS EMVLRSLQTAR
Sequences:
>Translated_411_residues MRVVAAVAAIGAALWLTLVPAAAQAADAGFTRFVASLWPEAQQAGVSRATFDAVTAGLEPDYKLPDLILPGRPKTGAPSQ AEFVQVPADYLKEARIESLAAYGRGLLQKYRPTLAAIEQRFGVPATVVLAIWGRETDFGRHRLPYDAVRVLATQAYVGRR KEQYRLELIAALKLISDGVVTRADMRSSWAGATGLTQFLPTELDKHGVDFDRDGRVDIWRSVPDALASAAQQLVNKGWKP GVRWAYEVRAPANADCTRGVPEVSQPIGQWLREGFALARGGKLGAGELAEPASLLQPEGIYGPAFLTTNNYFVIKQYNFS DLYVLFVGHLADRITDPRPFATPWAATKQLRTADVETMQNELTRLGFYNDKIDGKAGMLTRAALGAYQKSARLKLDCWPS EMVLRSLQTAR >Mature_411_residues MRVVAAVAAIGAALWLTLVPAAAQAADAGFTRFVASLWPEAQQAGVSRATFDAVTAGLEPDYKLPDLILPGRPKTGAPSQ AEFVQVPADYLKEARIESLAAYGRGLLQKYRPTLAAIEQRFGVPATVVLAIWGRETDFGRHRLPYDAVRVLATQAYVGRR KEQYRLELIAALKLISDGVVTRADMRSSWAGATGLTQFLPTELDKHGVDFDRDGRVDIWRSVPDALASAAQQLVNKGWKP GVRWAYEVRAPANADCTRGVPEVSQPIGQWLREGFALARGGKLGAGELAEPASLLQPEGIYGPAFLTTNNYFVIKQYNFS DLYVLFVGHLADRITDPRPFATPWAATKQLRTADVETMQNELTRLGFYNDKIDGKAGMLTRAALGAYQKSARLKLDCWPS EMVLRSLQTAR
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=135, Percent_Identity=32.5925925925926, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 45019; Mature: 45019
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVVAAVAAIGAALWLTLVPAAAQAADAGFTRFVASLWPEAQQAGVSRATFDAVTAGLEP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCCC DYKLPDLILPGRPKTGAPSQAEFVQVPADYLKEARIESLAAYGRGLLQKYRPTLAAIEQR CCCCCCCEECCCCCCCCCCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGVPATVVLAIWGRETDFGRHRLPYDAVRVLATQAYVGRRKEQYRLELIAALKLISDGVV HCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCH TRADMRSSWAGATGLTQFLPTELDKHGVDFDRDGRVDIWRSVPDALASAAQQLVNKGWKP HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC GVRWAYEVRAPANADCTRGVPEVSQPIGQWLREGFALARGGKLGAGELAEPASLLQPEGI CCCEEEEECCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCC YGPAFLTTNNYFVIKQYNFSDLYVLFVGHLADRITDPRPFATPWAATKQLRTADVETMQN CCCEEEEECCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH ELTRLGFYNDKIDGKAGMLTRAALGAYQKSARLKLDCWPSEMVLRSLQTAR HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCC >Mature Secondary Structure MRVVAAVAAIGAALWLTLVPAAAQAADAGFTRFVASLWPEAQQAGVSRATFDAVTAGLEP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCCC DYKLPDLILPGRPKTGAPSQAEFVQVPADYLKEARIESLAAYGRGLLQKYRPTLAAIEQR CCCCCCCEECCCCCCCCCCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGVPATVVLAIWGRETDFGRHRLPYDAVRVLATQAYVGRRKEQYRLELIAALKLISDGVV HCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCH TRADMRSSWAGATGLTQFLPTELDKHGVDFDRDGRVDIWRSVPDALASAAQQLVNKGWKP HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC GVRWAYEVRAPANADCTRGVPEVSQPIGQWLREGFALARGGKLGAGELAEPASLLQPEGI CCCEEEEECCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCC YGPAFLTTNNYFVIKQYNFSDLYVLFVGHLADRITDPRPFATPWAATKQLRTADVETMQN CCCEEEEECCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH ELTRLGFYNDKIDGKAGMLTRAALGAYQKSARLKLDCWPSEMVLRSLQTAR HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]