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The map label for this gene is yjjK [C]

Identifier: 86749042

GI number: 86749042

Start: 2192585

End: 2194234

Strand: Direct

Name: yjjK [C]

Synonym: RPB_1919

Alternate gene names: 86749042

Gene position: 2192585-2194234 (Clockwise)

Preceding gene: 86749040

Following gene: 86749045

Centisome position: 41.12

GC content: 63.94

Gene sequence:

>1650_bases
ATGGCTCGCCAGTTCGTTTACTTCATGCAGGGCCTGACCAAGGCCTATCCGACCCGCAAGGTGCTGGATAACGTCCATTT
GTCGTTCTATCCCGACGCCAAGATCGGCGTGCTCGGCGTCAACGGCGCCGGCAAATCGACCCTGCTGAAGATCATGGCGG
GGATCGACAAGGAATACACCGGCGAGGCCTGGGTCGCCGACGGCGCCCGCGTCGGCTATCTCGAACAGGAACCGCAGCTC
GATGCCGCGCTGAACGTGCGCGAGAACGTCATGCTCGGCGTCGCCAAGCAGAAGGCGATCCTCGATCGCTACAACGAGCT
GGCGATGAACTACTCCGAGGAAACCGCCGACGAGATGACGGCGCTGCAGGACCAGATCGAGTCCGCCGGGCTGTGGGATC
TCGACAGCCAGGTCGATCAGGCGATGGACGCGCTGCGCTGCCCGCCGGACGACGCCGACGTCACCAAGCTGTCGGGCGGC
GAGCGCCGCCGCGTCGCGCTGTGCAAGCTGCTGCTCGACCGGCCCGAACTGCTGCTGCTGGACGAGCCGACCAACCATCT
CGACGCCGAGAGCGTGTCGTGGCTCGAGAACCATCTGCGCAATTATCCGGGTGCGATCCTGATCGTCACCCATGATCGCT
ACTTCCTCGACAACGTCACGTCCTGGATCCTCGAACTCGACCGCGGCAAGGGCATTCCCTACGAGGGCAATTACTCGTCC
TGGCTGGTGCAGAAGCAGAAGCGGCTGCTGCAGGAGGGGCGCGAGGACGCGGCCCATCAGAAGACGCTGGAGCGCGAGCA
GGAGTGGATCGCCTCATCGCCCAAGGCTCGGCAGGCCAAGTCCAAGGCGCGCTACCAGCGCTACGATGAACTGCTCGCCA
AGGCCAGCGAGAAGCAGACCCAGACCGCGCAGATCATCATCCCGGTGGCCGAGCGGCTCGGCAACAACGTCGTCGAGTTC
GACCACCTGACCAAGGGCTTCGGCGACAAGTTGCTGATCGACGATCTGACCTTCAAGCTGCCGCCCGGCGGCATCGTCGG
CGTGATCGGCCCGAACGGCGCCGGCAAGACCACATTGTTCCGGATGATCACCGGGCAGGAGAAGCCCGACGGCGGCACCA
TCACCGTCGGCGAGACCGTGCATCTCGGCTATGTCGATCAGTCGCGCGACAGCCTCGACGCCAAGAAGACGGTGTGGGAG
GAGATTTCCGGCGGCAACGAGCAGATCCTGCTCGGCAAGAAGGAAGTCAATTCGCGCGGCTATTGCTCGTCGTTCAATTT
CAAGGGCGGCGACCAGCAGAAGAAGGTCGGCTCACTGTCGGGCGGTGAGCGCAACCGCGTCCACCTCGCCAAGATGCTGA
AGTCGGGCGCCAACGTGCTGCTGCTCGACGAACCGACCAACGACCTCGACGTCGACACGCTGCGCGCGCTCGAAGAGGCG
CTGGAGGATTTCGCCGGCTGCGCCGTGATCATCAGCCATGACCGCTGGTTCCTCGACCGCATCGCCACGCATATCCTGGC
GTTCGAGGACGACAGCCATGTCGAGTGGTTCGAGGGTAACTTCCAGGACTACGAGAAGGACAAGATGCGGCGGCTGGGGC
AGGACGCCATCATCCCGCACCGCGCGAAGTACAAGAAGCTGACGCGTTGA

Upstream 100 bases:

>100_bases
CATTGCTTAACGTCGCGCCTGCTCGGGTTGCCCTTTGCCGGACGCACCGTTACATCAACCTCGACCAATTCCCCCGCACG
CATCGCTTTCAAGGACGCCG

Downstream 100 bases:

>100_bases
GGCGCGTCAGTCCGGCGTGATCAAAGCAACGTCCGGGAAGTAGCTGTGGTAGCGGCCGGTATCGCGCGTCAGGATGGGAA
TTCCCGCGGCAGACGCGTGC

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 549; Mature: 548

Protein sequence:

>549_residues
MARQFVYFMQGLTKAYPTRKVLDNVHLSFYPDAKIGVLGVNGAGKSTLLKIMAGIDKEYTGEAWVADGARVGYLEQEPQL
DAALNVRENVMLGVAKQKAILDRYNELAMNYSEETADEMTALQDQIESAGLWDLDSQVDQAMDALRCPPDDADVTKLSGG
ERRRVALCKLLLDRPELLLLDEPTNHLDAESVSWLENHLRNYPGAILIVTHDRYFLDNVTSWILELDRGKGIPYEGNYSS
WLVQKQKRLLQEGREDAAHQKTLEREQEWIASSPKARQAKSKARYQRYDELLAKASEKQTQTAQIIIPVAERLGNNVVEF
DHLTKGFGDKLLIDDLTFKLPPGGIVGVIGPNGAGKTTLFRMITGQEKPDGGTITVGETVHLGYVDQSRDSLDAKKTVWE
EISGGNEQILLGKKEVNSRGYCSSFNFKGGDQQKKVGSLSGGERNRVHLAKMLKSGANVLLLDEPTNDLDVDTLRALEEA
LEDFAGCAVIISHDRWFLDRIATHILAFEDDSHVEWFEGNFQDYEKDKMRRLGQDAIIPHRAKYKKLTR

Sequences:

>Translated_549_residues
MARQFVYFMQGLTKAYPTRKVLDNVHLSFYPDAKIGVLGVNGAGKSTLLKIMAGIDKEYTGEAWVADGARVGYLEQEPQL
DAALNVRENVMLGVAKQKAILDRYNELAMNYSEETADEMTALQDQIESAGLWDLDSQVDQAMDALRCPPDDADVTKLSGG
ERRRVALCKLLLDRPELLLLDEPTNHLDAESVSWLENHLRNYPGAILIVTHDRYFLDNVTSWILELDRGKGIPYEGNYSS
WLVQKQKRLLQEGREDAAHQKTLEREQEWIASSPKARQAKSKARYQRYDELLAKASEKQTQTAQIIIPVAERLGNNVVEF
DHLTKGFGDKLLIDDLTFKLPPGGIVGVIGPNGAGKTTLFRMITGQEKPDGGTITVGETVHLGYVDQSRDSLDAKKTVWE
EISGGNEQILLGKKEVNSRGYCSSFNFKGGDQQKKVGSLSGGERNRVHLAKMLKSGANVLLLDEPTNDLDVDTLRALEEA
LEDFAGCAVIISHDRWFLDRIATHILAFEDDSHVEWFEGNFQDYEKDKMRRLGQDAIIPHRAKYKKLTR
>Mature_548_residues
ARQFVYFMQGLTKAYPTRKVLDNVHLSFYPDAKIGVLGVNGAGKSTLLKIMAGIDKEYTGEAWVADGARVGYLEQEPQLD
AALNVRENVMLGVAKQKAILDRYNELAMNYSEETADEMTALQDQIESAGLWDLDSQVDQAMDALRCPPDDADVTKLSGGE
RRRVALCKLLLDRPELLLLDEPTNHLDAESVSWLENHLRNYPGAILIVTHDRYFLDNVTSWILELDRGKGIPYEGNYSSW
LVQKQKRLLQEGREDAAHQKTLEREQEWIASSPKARQAKSKARYQRYDELLAKASEKQTQTAQIIIPVAERLGNNVVEFD
HLTKGFGDKLLIDDLTFKLPPGGIVGVIGPNGAGKTTLFRMITGQEKPDGGTITVGETVHLGYVDQSRDSLDAKKTVWEE
ISGGNEQILLGKKEVNSRGYCSSFNFKGGDQQKKVGSLSGGERNRVHLAKMLKSGANVLLLDEPTNDLDVDTLRALEEAL
EDFAGCAVIISHDRWFLDRIATHILAFEDDSHVEWFEGNFQDYEKDKMRRLGQDAIIPHRAKYKKLTR

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=528, Percent_Identity=29.5454545454545, Blast_Score=195, Evalue=9e-50,
Organism=Homo sapiens, GI10947135, Length=538, Percent_Identity=28.2527881040892, Blast_Score=170, Evalue=4e-42,
Organism=Homo sapiens, GI69354671, Length=538, Percent_Identity=28.2527881040892, Blast_Score=170, Evalue=4e-42,
Organism=Homo sapiens, GI27881506, Length=521, Percent_Identity=26.295585412668, Blast_Score=166, Evalue=6e-41,
Organism=Homo sapiens, GI10947137, Length=521, Percent_Identity=26.295585412668, Blast_Score=165, Evalue=8e-41,
Organism=Homo sapiens, GI9955963, Length=232, Percent_Identity=26.2931034482759, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI4506341, Length=246, Percent_Identity=27.6422764227642, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI2367384, Length=553, Percent_Identity=57.3236889692586, Blast_Score=648, Evalue=0.0,
Organism=Escherichia coli, GI1787182, Length=524, Percent_Identity=35.1145038167939, Blast_Score=312, Evalue=3e-86,
Organism=Escherichia coli, GI1789751, Length=519, Percent_Identity=32.7552986512524, Blast_Score=255, Evalue=6e-69,
Organism=Escherichia coli, GI1787041, Length=528, Percent_Identity=29.9242424242424, Blast_Score=235, Evalue=7e-63,
Organism=Escherichia coli, GI48994943, Length=491, Percent_Identity=25.050916496945, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI87081782, Length=564, Percent_Identity=24.113475177305, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1790190, Length=533, Percent_Identity=23.4521575984991, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI48995001, Length=530, Percent_Identity=24.9056603773585, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1788472, Length=516, Percent_Identity=23.062015503876, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1788225, Length=244, Percent_Identity=28.2786885245902, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI87081709, Length=195, Percent_Identity=30.2564102564103, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1788165, Length=189, Percent_Identity=31.7460317460317, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1789991, Length=530, Percent_Identity=23.9622641509434, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI87081791, Length=198, Percent_Identity=31.8181818181818, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1789593, Length=218, Percent_Identity=29.8165137614679, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787029, Length=261, Percent_Identity=25.6704980842912, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1786398, Length=223, Percent_Identity=28.6995515695067, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1788761, Length=231, Percent_Identity=26.8398268398268, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1790467, Length=163, Percent_Identity=31.2883435582822, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1789873, Length=223, Percent_Identity=27.8026905829596, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787164, Length=198, Percent_Identity=25.2525252525253, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1786703, Length=211, Percent_Identity=29.3838862559242, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1788450, Length=221, Percent_Identity=26.2443438914027, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1786563, Length=192, Percent_Identity=28.125, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788053, Length=212, Percent_Identity=28.3018867924528, Blast_Score=63, Evalue=6e-11,
Organism=Escherichia coli, GI1788897, Length=209, Percent_Identity=26.7942583732057, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=559, Percent_Identity=27.7280858676207, Blast_Score=214, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17553372, Length=541, Percent_Identity=29.2051756007394, Blast_Score=204, Evalue=8e-53,
Organism=Caenorhabditis elegans, GI17555318, Length=551, Percent_Identity=25.0453720508167, Blast_Score=167, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17510237, Length=245, Percent_Identity=28.1632653061224, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17543740, Length=194, Percent_Identity=28.3505154639175, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17565938, Length=214, Percent_Identity=27.1028037383178, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=227, Percent_Identity=25.9911894273128, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=194, Percent_Identity=24.7422680412371, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193211017, Length=194, Percent_Identity=24.7422680412371, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI115534520, Length=287, Percent_Identity=25.0871080139373, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=194, Percent_Identity=24.2268041237113, Blast_Score=66, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI115535101, Length=198, Percent_Identity=28.7878787878788, Blast_Score=65, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17567265, Length=192, Percent_Identity=28.6458333333333, Blast_Score=65, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=514, Percent_Identity=30.1556420233463, Blast_Score=196, Evalue=6e-51,
Organism=Saccharomyces cerevisiae, GI6321121, Length=538, Percent_Identity=27.6951672862454, Blast_Score=188, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6324314, Length=379, Percent_Identity=27.1767810026385, Blast_Score=110, Evalue=8e-25,
Organism=Saccharomyces cerevisiae, GI6323278, Length=374, Percent_Identity=25.4010695187166, Blast_Score=109, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6325030, Length=374, Percent_Identity=25.668449197861, Blast_Score=98, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24641342, Length=539, Percent_Identity=29.6846011131725, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI24666836, Length=529, Percent_Identity=30.2457466918715, Blast_Score=201, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24642252, Length=533, Percent_Identity=26.078799249531, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI18859989, Length=533, Percent_Identity=26.078799249531, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24666092, Length=210, Percent_Identity=31.4285714285714, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI23397593, Length=215, Percent_Identity=29.7674418604651, Blast_Score=73, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022374
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61581; Mature: 61450

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARQFVYFMQGLTKAYPTRKVLDNVHLSFYPDAKIGVLGVNGAGKSTLLKIMAGIDKEYT
CCCHHHHHHHHHHHHCCHHHHHHCCCEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCC
GEAWVADGARVGYLEQEPQLDAALNVRENVMLGVAKQKAILDRYNELAMNYSEETADEMT
CCEEECCCCEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ALQDQIESAGLWDLDSQVDQAMDALRCPPDDADVTKLSGGERRRVALCKLLLDRPELLLL
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCEEEE
DEPTNHLDAESVSWLENHLRNYPGAILIVTHDRYFLDNVTSWILELDRGKGIPYEGNYSS
ECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHH
WLVQKQKRLLQEGREDAAHQKTLEREQEWIASSPKARQAKSKARYQRYDELLAKASEKQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
QTAQIIIPVAERLGNNVVEFDHLTKGFGDKLLIDDLTFKLPPGGIVGVIGPNGAGKTTLF
CHHEEEEEHHHHHCCCCEEHHHHHHCCCCEEEEECCEEECCCCCEEEEECCCCCCHHHEE
RMITGQEKPDGGTITVGETVHLGYVDQSRDSLDAKKTVWEEISGGNEQILLGKKEVNSRG
EECCCCCCCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCC
YCSSFNFKGGDQQKKVGSLSGGERNRVHLAKMLKSGANVLLLDEPTNDLDVDTLRALEEA
CCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
LEDFAGCAVIISHDRWFLDRIATHILAFEDDSHVEWFEGNFQDYEKDKMRRLGQDAIIPH
HHHHCCEEEEEECCHHHHHHHHHHHEEECCCCCCEEECCCCCHHHHHHHHHCCCCCCCCC
RAKYKKLTR
HHHHHHCCC
>Mature Secondary Structure 
ARQFVYFMQGLTKAYPTRKVLDNVHLSFYPDAKIGVLGVNGAGKSTLLKIMAGIDKEYT
CCHHHHHHHHHHHHCCHHHHHHCCCEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCC
GEAWVADGARVGYLEQEPQLDAALNVRENVMLGVAKQKAILDRYNELAMNYSEETADEMT
CCEEECCCCEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ALQDQIESAGLWDLDSQVDQAMDALRCPPDDADVTKLSGGERRRVALCKLLLDRPELLLL
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCEEEE
DEPTNHLDAESVSWLENHLRNYPGAILIVTHDRYFLDNVTSWILELDRGKGIPYEGNYSS
ECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHH
WLVQKQKRLLQEGREDAAHQKTLEREQEWIASSPKARQAKSKARYQRYDELLAKASEKQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
QTAQIIIPVAERLGNNVVEFDHLTKGFGDKLLIDDLTFKLPPGGIVGVIGPNGAGKTTLF
CHHEEEEEHHHHHCCCCEEHHHHHHCCCCEEEEECCEEECCCCCEEEEECCCCCCHHHEE
RMITGQEKPDGGTITVGETVHLGYVDQSRDSLDAKKTVWEEISGGNEQILLGKKEVNSRG
EECCCCCCCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCC
YCSSFNFKGGDQQKKVGSLSGGERNRVHLAKMLKSGANVLLLDEPTNDLDVDTLRALEEA
CCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
LEDFAGCAVIISHDRWFLDRIATHILAFEDDSHVEWFEGNFQDYEKDKMRRLGQDAIIPH
HHHHCCEEEEEECCHHHHHHHHHHHEEECCCCCCEEECCCCCHHHHHHHHHCCCCCCCCC
RAKYKKLTR
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]