Click here to switch to the map view.

The map label for this gene is gmhA [H]

Identifier: 86748725

GI number: 86748725

Start: 1803347

End: 1803931

Strand: Reverse

Name: gmhA [H]

Synonym: RPB_1600

Alternate gene names: 86748725

Gene position: 1803931-1803347 (Counterclockwise)

Preceding gene: 86748726

Following gene: 86748724

Centisome position: 33.83

GC content: 70.09

Gene sequence:

>585_bases
TTGAGCCAGGACCGGATCGCCGCCCATTTCCACAATTCGCTGGCCGCGATGACCGCGGCCGCGGGCGACCAGACGCTGCT
GTCGGCGTCGCGCGCCATTGCGGCGGCGTCGATCAAGGCGCTGCGCGACGGCCGCAAGATCCTGATCGCAGGCAATGGCG
GCAGCGCCGCCGATGCCCAGCACATCGCCGCCGAGATCATCGGGCGCTACAAGCAGGACCGCCCGGCGTGGCCGGCGATC
GCGCTGACCACCGACACCTCGGCGCTGACCGCGATCGCCAATGATTACGGCTTCGAGCGCGTGTTCGCCCGACAGGTCGA
AGGGCTCGGCCAGCGCGGCGACGTCTTCATCGGCATCACCACGTCGGGCCGCTCGCCGAACATTCTCGCAGCCTTGACGG
TCGCCCGCGAGCGCGGCCTCGTCACCATCGGCATGACCGGCCCGAACGGCGCTGCGATGGGCGCGCTGTGCGATCATCTG
CTGGTGGCGCCGGGCGCCGAAACCGCTCTGGTGCAACAGATCCATCTGGTGGCCGCGCACGCGATCTGCGACGAGATCGA
AGGCGCGCTGGCAGCCGGGGCATGA

Upstream 100 bases:

>100_bases
GGGCAAGGCCGGCCTCGCCCCGGCGCGATAGACCGCGCGACTTGCACCCGCCCCTGCGCTGCGCTTAACCAGTGCCGACC
CATCAGCTTTCAGGTGTGAA

Downstream 100 bases:

>100_bases
CGGCGAGCGCCACCACGCCGCTGCGTCCCGCCGCGTTTCTCGATCGCGACGGCGTCGTGAACTACAATGATCACTATATC
GGCAGCCGCGACCGGTTTCG

Product: phosphoheptose isomerase

Products: NA

Alternate protein names: Sedoheptulose 7-phosphate isomerase [H]

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MSQDRIAAHFHNSLAAMTAAAGDQTLLSASRAIAAASIKALRDGRKILIAGNGGSAADAQHIAAEIIGRYKQDRPAWPAI
ALTTDTSALTAIANDYGFERVFARQVEGLGQRGDVFIGITTSGRSPNILAALTVARERGLVTIGMTGPNGAAMGALCDHL
LVAPGAETALVQQIHLVAAHAICDEIEGALAAGA

Sequences:

>Translated_194_residues
MSQDRIAAHFHNSLAAMTAAAGDQTLLSASRAIAAASIKALRDGRKILIAGNGGSAADAQHIAAEIIGRYKQDRPAWPAI
ALTTDTSALTAIANDYGFERVFARQVEGLGQRGDVFIGITTSGRSPNILAALTVARERGLVTIGMTGPNGAAMGALCDHL
LVAPGAETALVQQIHLVAAHAICDEIEGALAAGA
>Mature_193_residues
SQDRIAAHFHNSLAAMTAAAGDQTLLSASRAIAAASIKALRDGRKILIAGNGGSAADAQHIAAEIIGRYKQDRPAWPAIA
LTTDTSALTAIANDYGFERVFARQVEGLGQRGDVFIGITTSGRSPNILAALTVARERGLVTIGMTGPNGAAMGALCDHLL
VAPGAETALVQQIHLVAAHAICDEIEGALAAGA

Specific function: Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate [H]

COG id: COG0279

COG function: function code G; Phosphoheptose isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789539, Length=191, Percent_Identity=39.7905759162304, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1786416, Length=191, Percent_Identity=36.1256544502618, Blast_Score=132, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020620
- InterPro:   IPR001347 [H]

Pfam domain/function: PF01380 SIS [H]

EC number: =5.3.1.28 [H]

Molecular weight: Translated: 19832; Mature: 19701

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQDRIAAHFHNSLAAMTAAAGDQTLLSASRAIAAASIKALRDGRKILIAGNGGSAADAQ
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHH
HIAAEIIGRYKQDRPAWPAIALTTDTSALTAIANDYGFERVFARQVEGLGQRGDVFIGIT
HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEE
TSGRSPNILAALTVARERGLVTIGMTGPNGAAMGALCDHLLVAPGAETALVQQIHLVAAH
ECCCCCCEEEEEEEHHHCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AICDEIEGALAAGA
HHHHHHHHHHHCCC
>Mature Secondary Structure 
SQDRIAAHFHNSLAAMTAAAGDQTLLSASRAIAAASIKALRDGRKILIAGNGGSAADAQ
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHH
HIAAEIIGRYKQDRPAWPAIALTTDTSALTAIANDYGFERVFARQVEGLGQRGDVFIGIT
HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEE
TSGRSPNILAALTVARERGLVTIGMTGPNGAAMGALCDHLLVAPGAETALVQQIHLVAAH
ECCCCCCEEEEEEEHHHCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AICDEIEGALAAGA
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA